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The map label for this gene is ychA [C]

Identifier: 186475301

GI number: 186475301

Start: 604734

End: 605585

Strand: Direct

Name: ychA [C]

Synonym: Bphy_0533

Alternate gene names: 186475301

Gene position: 604734-605585 (Clockwise)

Preceding gene: 186475300

Following gene: 186475307

Centisome position: 17.38

GC content: 62.32

Gene sequence:

>852_bases
GTGATCACGACGACCCGGGTTCTCGACTATTTCAGCGCGCTCGTCGCCGAGGACGACGGGCTTCCGCTCACGGAAGCGGC
GCTGTCGCTTGCGCAGGACGCCTATCCCGATCTCGATCTGCAGGCGGTGCTTGCCGAGATCGACGAACTTGCGTTGCGCG
TCAAGCGCCGCATTCCCGACGATGCCGACATCCAGCAACGTGTCGGCATTCTGAATCGCTACTTCTTCCGCGAACTGGGT
TTCGCGGCGAACGTCAACGATTACTACGACCCGGACAACAGCCATTTGAACATGGTGCTGAAGCGCCGGCGCGGCATTCC
GATTTCGCTGGCGGTTCTGTATCTGGAGATGGCGTCGCAAGTGGACATTCCCGTGCGCGGCGTCGCGTTCCCCGGGCATT
TTCTGCTACGCGTCACGCTGCCCGAAGGCGACGCGATGATCGATCCGACCACGGGCCATCCACTGACGGAAGCCGAGATG
GTCGAGATGCTGGAACCCTATGTGGCGAAGGCGGGCGAATCAGTGAGCCGCGCGCTGCGCATGCTGCTTCAGCCGGCGAC
GCGCCGCGAGATCATCGCGCGTATGCTGCGCAATCTGAAGGCGACATATCTGCAGACCGAGCGCTGGCAGCGGCTGCTTG
CCGTGCAGCAGCGTCTCGTGATCGCGTTGCCGGAGAGCATCGAGGAAGTGCGCGATCGCGGATTCGCGTATGCGCGGCTC
GATTTTCTGCGTCCTGCGCTCGAAGATCTCGAACGCTATCTCGGTGATCGGCCGGATGCCGAAGATGCCACCGTCGTCGA
ATCGCAATTGCTCGAGTTGCGGCAGCGCACACAGCATAACGATCGCGACTGA

Upstream 100 bases:

>100_bases
TGGCGCTGCTCGCGGCGTGCCTTGTGCTGTTTGCGGCGTTATATTTCGGTATGCTGTGGCTGATGGGCTTCAAGTACGCG
TATTTCAGAAGGCGAGTGAA

Downstream 100 bases:

>100_bases
CCTGATCGGTCCGTCGCTGCAAACGAAAACGCCTGCGCAGCTTTCACTACGCAGGCGTTTTCATTCCAGCGCTATCGGGT
CTACTTCGGCTGCATGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MITTTRVLDYFSALVAEDDGLPLTEAALSLAQDAYPDLDLQAVLAEIDELALRVKRRIPDDADIQQRVGILNRYFFRELG
FAANVNDYYDPDNSHLNMVLKRRRGIPISLAVLYLEMASQVDIPVRGVAFPGHFLLRVTLPEGDAMIDPTTGHPLTEAEM
VEMLEPYVAKAGESVSRALRMLLQPATRREIIARMLRNLKATYLQTERWQRLLAVQQRLVIALPESIEEVRDRGFAYARL
DFLRPALEDLERYLGDRPDAEDATVVESQLLELRQRTQHNDRD

Sequences:

>Translated_283_residues
MITTTRVLDYFSALVAEDDGLPLTEAALSLAQDAYPDLDLQAVLAEIDELALRVKRRIPDDADIQQRVGILNRYFFRELG
FAANVNDYYDPDNSHLNMVLKRRRGIPISLAVLYLEMASQVDIPVRGVAFPGHFLLRVTLPEGDAMIDPTTGHPLTEAEM
VEMLEPYVAKAGESVSRALRMLLQPATRREIIARMLRNLKATYLQTERWQRLLAVQQRLVIALPESIEEVRDRGFAYARL
DFLRPALEDLERYLGDRPDAEDATVVESQLLELRQRTQHNDRD
>Mature_283_residues
MITTTRVLDYFSALVAEDDGLPLTEAALSLAQDAYPDLDLQAVLAEIDELALRVKRRIPDDADIQQRVGILNRYFFRELG
FAANVNDYYDPDNSHLNMVLKRRRGIPISLAVLYLEMASQVDIPVRGVAFPGHFLLRVTLPEGDAMIDPTTGHPLTEAEM
VEMLEPYVAKAGESVSRALRMLLQPATRREIIARMLRNLKATYLQTERWQRLLAVQQRLVIALPESIEEVRDRGFAYARL
DFLRPALEDLERYLGDRPDAEDATVVESQLLELRQRTQHNDRD

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306502, Length=226, Percent_Identity=28.3185840707965, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI16306500, Length=226, Percent_Identity=28.3185840707965, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1787465, Length=250, Percent_Identity=28, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32285; Mature: 32285

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTTRVLDYFSALVAEDDGLPLTEAALSLAQDAYPDLDLQAVLAEIDELALRVKRRIPD
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
DADIQQRVGILNRYFFRELGFAANVNDYYDPDNSHLNMVLKRRRGIPISLAVLYLEMASQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
VDIPVRGVAFPGHFLLRVTLPEGDAMIDPTTGHPLTEAEMVEMLEPYVAKAGESVSRALR
CCCCCCEEECCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
MLLQPATRREIIARMLRNLKATYLQTERWQRLLAVQQRLVIALPESIEEVRDRGFAYARL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHH
DFLRPALEDLERYLGDRPDAEDATVVESQLLELRQRTQHNDRD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MITTTRVLDYFSALVAEDDGLPLTEAALSLAQDAYPDLDLQAVLAEIDELALRVKRRIPD
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
DADIQQRVGILNRYFFRELGFAANVNDYYDPDNSHLNMVLKRRRGIPISLAVLYLEMASQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
VDIPVRGVAFPGHFLLRVTLPEGDAMIDPTTGHPLTEAEMVEMLEPYVAKAGESVSRALR
CCCCCCEEECCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
MLLQPATRREIIARMLRNLKATYLQTERWQRLLAVQQRLVIALPESIEEVRDRGFAYARL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHH
DFLRPALEDLERYLGDRPDAEDATVVESQLLELRQRTQHNDRD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]