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The map label for this gene is ygdL [H]

Identifier: 186475283

GI number: 186475283

Start: 586736

End: 587596

Strand: Direct

Name: ygdL [H]

Synonym: Bphy_0515

Alternate gene names: 186475283

Gene position: 586736-587596 (Clockwise)

Preceding gene: 186475279

Following gene: 186475286

Centisome position: 16.86

GC content: 64.11

Gene sequence:

>861_bases
ATGTCCACGCCTCTTGTCACCGGGCAATCCGATCTTACTACCGACCAGAACGAGCATGCAGCCGCTGACCGCGCGCGCCG
CTTCGGGGGTGTCGCGCGTCTGTATGGCGCCGACGCCCTCACTGCGTTCGAGCGCGCGCATGTCGCCGTCATCGGCATTG
GCGGGGTCGGCTCGTGGGCCGCGGAAGCACTGGCGCGCACGGCGATCGGCAAGATCACGCTGATCGATCTCGACAACGTC
GCCGAGAGCAATACGAACCGGCAGGTTCACGCGCTCGACGGCAACTATGGCAAACCGAAGGTCGACGCGATGGCCGAGCG
CATCAAGCTCATCGATCCGCAGTGCGATGTTCGGCTGATCGAAGATTTCATCGAGCCCGACAACTTCGACAAGGTGCTGG
GTGCCGGCTTCGACTTCGTGGTCGACGCGATCGACAGCGTGCGCACCAAGACGGCGTTGATCGCGTGGTGCGTCGAGCAC
AGGCAGCCGCTGATCACGGTGGGCGGCGCGGGCGGTCAGCTTGATCCGACGCGGATTCGTATCGACGATCTGGCGCAGAC
CATTCAGGATCCGCTCCTGTCGAAAGTGCGCGCACAATTGCGCAAGCAGCATGGCTTTCCGCGCGGGCCGAAAGCGAAAT
TCAAGGTGAGCGCGGTGTATTCGGACGAGCCGCTCATCTATCCTGAAGCTGCCGTGTGCGATATCGACGAACTGGCCGAA
CACGTCACGACGTCGCCGGGCCATCACGGTCCCGTGGGTTTGAACTGCGCGGGCTTCGGGTCGAGTGTGTGCGTGACGGC
GAGTTTCGGTTTCGCGGCCGTGTCGCATGTGCTGCGCGCGCTGGCGAAGCAGGCGGCGTGA

Upstream 100 bases:

>100_bases
ACGCAGAGACCCGCGCCATACCGCGCAATAACGCAGGGCGCGACGCCGTATCGACGCGTTCCTCCGCATGCACATGCCTG
AATTCGCCGAGCTACCTACC

Downstream 100 bases:

>100_bases
GGCGCAAATAGCATTGCGCGTGAATCAAAAAACGCGGCTCGTGGCCGCGTTCTTTCGTAGTCGCGCGAGAACGCTCGGTC
TTAACTGCGCTCAGTTCAAC

Product: UBA/THIF-type NAD/FAD binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSTPLVTGQSDLTTDQNEHAAADRARRFGGVARLYGADALTAFERAHVAVIGIGGVGSWAAEALARTAIGKITLIDLDNV
AESNTNRQVHALDGNYGKPKVDAMAERIKLIDPQCDVRLIEDFIEPDNFDKVLGAGFDFVVDAIDSVRTKTALIAWCVEH
RQPLITVGGAGGQLDPTRIRIDDLAQTIQDPLLSKVRAQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAVCDIDELAE
HVTTSPGHHGPVGLNCAGFGSSVCVTASFGFAAVSHVLRALAKQAA

Sequences:

>Translated_286_residues
MSTPLVTGQSDLTTDQNEHAAADRARRFGGVARLYGADALTAFERAHVAVIGIGGVGSWAAEALARTAIGKITLIDLDNV
AESNTNRQVHALDGNYGKPKVDAMAERIKLIDPQCDVRLIEDFIEPDNFDKVLGAGFDFVVDAIDSVRTKTALIAWCVEH
RQPLITVGGAGGQLDPTRIRIDDLAQTIQDPLLSKVRAQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAVCDIDELAE
HVTTSPGHHGPVGLNCAGFGSSVCVTASFGFAAVSHVLRALAKQAA
>Mature_285_residues
STPLVTGQSDLTTDQNEHAAADRARRFGGVARLYGADALTAFERAHVAVIGIGGVGSWAAEALARTAIGKITLIDLDNVA
ESNTNRQVHALDGNYGKPKVDAMAERIKLIDPQCDVRLIEDFIEPDNFDKVLGAGFDFVVDAIDSVRTKTALIAWCVEHR
QPLITVGGAGGQLDPTRIRIDDLAQTIQDPLLSKVRAQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAVCDIDELAEH
VTTSPGHHGPVGLNCAGFGSSVCVTASFGFAAVSHVLRALAKQAA

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=264, Percent_Identity=52.6515151515151, Blast_Score=285, Evalue=2e-78,
Organism=Escherichia coli, GI1787048, Length=136, Percent_Identity=28.6764705882353, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082356, Length=131, Percent_Identity=31.2977099236641, Blast_Score=62, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6321790, Length=232, Percent_Identity=27.1551724137931, Blast_Score=97, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6322825, Length=199, Percent_Identity=33.1658291457286, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24582879, Length=141, Percent_Identity=27.6595744680851, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 30488; Mature: 30357

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPLVTGQSDLTTDQNEHAAADRARRFGGVARLYGADALTAFERAHVAVIGIGGVGSWA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHCEEEEEEECCCCHHH
AEALARTAIGKITLIDLDNVAESNTNRQVHALDGNYGKPKVDAMAERIKLIDPQCDVRLI
HHHHHHHHHCEEEEEECCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHH
EDFIEPDNFDKVLGAGFDFVVDAIDSVRTKTALIAWCVEHRQPLITVGGAGGQLDPTRIR
HHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEE
IDDLAQTIQDPLLSKVRAQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAVCDIDELAE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEECCCHHHCCHHHHHH
HVTTSPGHHGPVGLNCAGFGSSVCVTASFGFAAVSHVLRALAKQAA
HHCCCCCCCCCCCCEECCCCCCEEEEECHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STPLVTGQSDLTTDQNEHAAADRARRFGGVARLYGADALTAFERAHVAVIGIGGVGSWA
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHCEEEEEEECCCCHHH
AEALARTAIGKITLIDLDNVAESNTNRQVHALDGNYGKPKVDAMAERIKLIDPQCDVRLI
HHHHHHHHHCEEEEEECCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHH
EDFIEPDNFDKVLGAGFDFVVDAIDSVRTKTALIAWCVEHRQPLITVGGAGGQLDPTRIR
HHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEE
IDDLAQTIQDPLLSKVRAQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAVCDIDELAE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEECCCHHHCCHHHHHH
HVTTSPGHHGPVGLNCAGFGSSVCVTASFGFAAVSHVLRALAKQAA
HHCCCCCCCCCCCCEECCCCCCEEEEECHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]