| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is eamA [H]
Identifier: 186475286
GI number: 186475286
Start: 589700
End: 590581
Strand: Direct
Name: eamA [H]
Synonym: Bphy_0518
Alternate gene names: 186475286
Gene position: 589700-590581 (Clockwise)
Preceding gene: 186475283
Following gene: 186475289
Centisome position: 16.95
GC content: 62.47
Gene sequence:
>882_bases ATGTCGCCGAAAGACCTGCTGCTAGCGCTGGTGGTCGTCGTTGCGTGGGGCGTGAACTTCGTCGTAATCAAGGTTGGCTT GCACGGCGTGCCGCCGATGCTGCTCGGCGCGTTGCGCTTCATGCTGGCCGCGTTTCCGGCGGTGTTCTTCATCAAGCGGC CGCAGATGCCGTGGCGCTGGCTGCTCGCGTATGGCGCGACCATCTCGCTGGGGCAGTTCGCGTTCCTGTTTTCCGCGATG TACGTCGGCATGCCGGCAGGTCTTGCGTCGCTCGTGCTGCAGGCGCAGGCGTTTTTCACGCTTGGCTTTGCCGCGCTTTT TCTGCATGAGCGCTTACGCGCGCAGAACGTGCTTGGTCTCGTGATCGCGGCTGCTGGTCTCGGCGTGATCGGTATACAGG GTGGCCATTCGATGACGCTCGCCGGGTTCATCCTCACGCTGTGCGCGGCCGTCATGTGGGCGCTCGGCAATATCGTCACG AAGAAGGTGGGCAAGGTCGATCTGGTGGGGCTCGTCGTATGGGGCAGTTTGATTCCGCCCGTGCCGTTCTTCGTGCTGTC GTATCTGTTCGAAGGGCCGCGGCGGATCGAGGCGGCGCTGACGGGGATCGGCGAGTCGTCGCTGTTCGCGATTGTTTATC TGGCGTTTGTTGCGACGCTGTTGGGCTATGGGTTGTGGAGCCGGCTGTTGTCGCGGTATGCGGCGGGGCAGGTGGCCCCC TTCTCTTTGCTCGTGCCGATTGTCGGGCTGGCTTCTGCTTCTGTGTTTCTCGACGAGTCGTTATCCGCTGCGCAGATTGG CGGCGCTGTTCTGGTGATGGCCGGACTTGCTGTCAATGTGTTTGGCGGGAGGGTGGTGGAGAGGTTTTCGCTGGCGAGGT AA
Upstream 100 bases:
>100_bases CGCGACATACGGTCAGCGCACGTCGTGCGAAGCGGGCGATGCGGATGTCGATGCTCCGCTACACTGTCCGGTTCCGATAC AAGTAAAAACAGGAGTCCAG
Downstream 100 bases:
>100_bases CAATTAGTCGGCGACGCAGTCGTCATTCTTGCATGCGGCGCGGCTTTGCCGGTTTGGTTTTTTGCTCACGCAGAGATCAG CGCATGTCACCGGAAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSPKDLLLALVVVVAWGVNFVVIKVGLHGVPPMLLGALRFMLAAFPAVFFIKRPQMPWRWLLAYGATISLGQFAFLFSAM YVGMPAGLASLVLQAQAFFTLGFAALFLHERLRAQNVLGLVIAAAGLGVIGIQGGHSMTLAGFILTLCAAVMWALGNIVT KKVGKVDLVGLVVWGSLIPPVPFFVLSYLFEGPRRIEAALTGIGESSLFAIVYLAFVATLLGYGLWSRLLSRYAAGQVAP FSLLVPIVGLASASVFLDESLSAAQIGGAVLVMAGLAVNVFGGRVVERFSLAR
Sequences:
>Translated_293_residues MSPKDLLLALVVVVAWGVNFVVIKVGLHGVPPMLLGALRFMLAAFPAVFFIKRPQMPWRWLLAYGATISLGQFAFLFSAM YVGMPAGLASLVLQAQAFFTLGFAALFLHERLRAQNVLGLVIAAAGLGVIGIQGGHSMTLAGFILTLCAAVMWALGNIVT KKVGKVDLVGLVVWGSLIPPVPFFVLSYLFEGPRRIEAALTGIGESSLFAIVYLAFVATLLGYGLWSRLLSRYAAGQVAP FSLLVPIVGLASASVFLDESLSAAQIGGAVLVMAGLAVNVFGGRVVERFSLAR >Mature_292_residues SPKDLLLALVVVVAWGVNFVVIKVGLHGVPPMLLGALRFMLAAFPAVFFIKRPQMPWRWLLAYGATISLGQFAFLFSAMY VGMPAGLASLVLQAQAFFTLGFAALFLHERLRAQNVLGLVIAAAGLGVIGIQGGHSMTLAGFILTLCAAVMWALGNIVTK KVGKVDLVGLVVWGSLIPPVPFFVLSYLFEGPRRIEAALTGIGESSLFAIVYLAFVATLLGYGLWSRLLSRYAAGQVAPF SLLVPIVGLASASVFLDESLSAAQIGGAVLVMAGLAVNVFGGRVVERFSLAR
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=291, Percent_Identity=53.2646048109966, Blast_Score=272, Evalue=2e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30997; Mature: 30866
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKDLLLALVVVVAWGVNFVVIKVGLHGVPPMLLGALRFMLAAFPAVFFIKRPQMPWRW CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LLAYGATISLGQFAFLFSAMYVGMPAGLASLVLQAQAFFTLGFAALFLHERLRAQNVLGL HHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAAAGLGVIGIQGGHSMTLAGFILTLCAAVMWALGNIVTKKVGKVDLVGLVVWGSLIPP HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC VPFFVLSYLFEGPRRIEAALTGIGESSLFAIVYLAFVATLLGYGLWSRLLSRYAAGQVAP HHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH FSLLVPIVGLASASVFLDESLSAAQIGGAVLVMAGLAVNVFGGRVVERFSLAR HHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SPKDLLLALVVVVAWGVNFVVIKVGLHGVPPMLLGALRFMLAAFPAVFFIKRPQMPWRW CHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LLAYGATISLGQFAFLFSAMYVGMPAGLASLVLQAQAFFTLGFAALFLHERLRAQNVLGL HHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAAAGLGVIGIQGGHSMTLAGFILTLCAAVMWALGNIVTKKVGKVDLVGLVVWGSLIPP HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC VPFFVLSYLFEGPRRIEAALTGIGESSLFAIVYLAFVATLLGYGLWSRLLSRYAAGQVAP HHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH FSLLVPIVGLASASVFLDESLSAAQIGGAVLVMAGLAVNVFGGRVVERFSLAR HHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]