| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is gutB [H]
Identifier: 186475271
GI number: 186475271
Start: 574653
End: 575741
Strand: Direct
Name: gutB [H]
Synonym: Bphy_0503
Alternate gene names: 186475271
Gene position: 574653-575741 (Clockwise)
Preceding gene: 186475270
Following gene: 186475272
Centisome position: 16.52
GC content: 59.5
Gene sequence:
>1089_bases ATGACTACTCAGGACAACAGCAAAAGCATGACGGCGATCGTGTGTCACGCGCCGAAAGACTATCGCGTCGAACGCGTGAC GAAGCCACAGGCGCGCGCGCACGAACTCGTGATTCGCATCGCCGCGTGCGGTATCTGTGCCAGCGACTGCAAATGCCATT CTGGCGCGAAGATGTTCTGGGGCGGACCGAGCCCGTGGGTGAAGGCGCCCGTGATTCCGGGGCATGAGTTCTTTGGCTAC GTCGAAGAACTCGGTGAAGGGGCCGCCGAGCATTTCGACGTGAAGAAGGGCGACCGCGTGATTGCCGAACAGATCGTGCC GTGCGGTAAATGCCGCTATTGCAGGTCCGGCCAGTACTGGATGTGCGAAGTGCACAACATCTTCGGCTTCCAGCGTGAAG TTGCGGACGGCGGTATGGCCGAATACATGCGCATTCCGCCGACGGCGATCGTGCACAAGATTCCCGATGGCATCTCGCTC GAAGATGCCGCGATCATCGAACCGCTCGCGTGCGCGATTCACACCGTCAATCGCGGCGACATTCAACTGGACGATGTCGT CGTGATCGCGGGCGCGGGGCCGCTCGGCTTGATGATGACGCAAGTCGCGCACCTGAAGACGCCGAAGAAACTCGTTGTGA TCGATCTGGTCGACGAGCGTCTCGAACTTGCACGCGAATATGGCGCCGATGTGACGATCAATCCGAAGAACGACGATGCG CTCGCCATCGTGAAGTCGCTGACGGACAACTATGGCTGCGATGTCTACATCGAAACGACGGGCGTGCCCGCCGGCGTGAA TCAGGGCATGGACCTGATTCGCAAGCTTGGGCGTTTCGTCGAGTTTTCCGTGTTCGGTGCGGAGACTACAATGGACTGGT CGATCATCGGCGACCGCAAGGAGCTCGATGTGCGCGGCGCGCATCTCGGCCCTTACTGCTATCCGGTTGCGATCGATTTG CTGGCGCGCGGACTCGTCACATCGAAAGGCATCGTCACGCACGGTTTTTCGCTCGAAGAATGGGACGAAGCGATCAAGGT CGCGAATTCGCTCGATTCGATCAAGGTGTTGTTGAAGCCTGCCCGCTAG
Upstream 100 bases:
>100_bases TCAAGGGCGGAATCATTCTGCTCGCGATCTACATCAGCCGCGAACGCAAGAAGTAACGGTTCCCTTTCCTCTGTTCTCCA CTTACAAGCAGGGCAATGCA
Downstream 100 bases:
>100_bases CTGGATAGTTCGTCCGTCATTCGAAAAATGCACAGTGCGCGTCGTGCAGACGCGCACACGGAGACACTATGAATTACGTC ATCGGCGTCGATATCGGCAC
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTTQDNSKSMTAIVCHAPKDYRVERVTKPQARAHELVIRIAACGICASDCKCHSGAKMFWGGPSPWVKAPVIPGHEFFGY VEELGEGAAEHFDVKKGDRVIAEQIVPCGKCRYCRSGQYWMCEVHNIFGFQREVADGGMAEYMRIPPTAIVHKIPDGISL EDAAIIEPLACAIHTVNRGDIQLDDVVVIAGAGPLGLMMTQVAHLKTPKKLVVIDLVDERLELAREYGADVTINPKNDDA LAIVKSLTDNYGCDVYIETTGVPAGVNQGMDLIRKLGRFVEFSVFGAETTMDWSIIGDRKELDVRGAHLGPYCYPVAIDL LARGLVTSKGIVTHGFSLEEWDEAIKVANSLDSIKVLLKPAR
Sequences:
>Translated_362_residues MTTQDNSKSMTAIVCHAPKDYRVERVTKPQARAHELVIRIAACGICASDCKCHSGAKMFWGGPSPWVKAPVIPGHEFFGY VEELGEGAAEHFDVKKGDRVIAEQIVPCGKCRYCRSGQYWMCEVHNIFGFQREVADGGMAEYMRIPPTAIVHKIPDGISL EDAAIIEPLACAIHTVNRGDIQLDDVVVIAGAGPLGLMMTQVAHLKTPKKLVVIDLVDERLELAREYGADVTINPKNDDA LAIVKSLTDNYGCDVYIETTGVPAGVNQGMDLIRKLGRFVEFSVFGAETTMDWSIIGDRKELDVRGAHLGPYCYPVAIDL LARGLVTSKGIVTHGFSLEEWDEAIKVANSLDSIKVLLKPAR >Mature_361_residues TTQDNSKSMTAIVCHAPKDYRVERVTKPQARAHELVIRIAACGICASDCKCHSGAKMFWGGPSPWVKAPVIPGHEFFGYV EELGEGAAEHFDVKKGDRVIAEQIVPCGKCRYCRSGQYWMCEVHNIFGFQREVADGGMAEYMRIPPTAIVHKIPDGISLE DAAIIEPLACAIHTVNRGDIQLDDVVVIAGAGPLGLMMTQVAHLKTPKKLVVIDLVDERLELAREYGADVTINPKNDDAL AIVKSLTDNYGCDVYIETTGVPAGVNQGMDLIRKLGRFVEFSVFGAETTMDWSIIGDRKELDVRGAHLGPYCYPVAIDLL ARGLVTSKGIVTHGFSLEEWDEAIKVANSLDSIKVLLKPAR
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=350, Percent_Identity=31.7142857142857, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI4501929, Length=395, Percent_Identity=24.8101265822785, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI71565154, Length=251, Percent_Identity=27.0916334661355, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI4501933, Length=279, Percent_Identity=26.8817204301075, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI34577061, Length=279, Percent_Identity=26.5232974910394, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI71743840, Length=271, Percent_Identity=26.9372693726937, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI262073058, Length=271, Percent_Identity=26.9372693726937, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1787863, Length=341, Percent_Identity=29.6187683284457, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1788073, Length=359, Percent_Identity=28.4122562674095, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1790045, Length=337, Percent_Identity=31.1572700296736, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1788407, Length=362, Percent_Identity=27.9005524861878, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI226510992, Length=350, Percent_Identity=27.4285714285714, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1788075, Length=363, Percent_Identity=28.3746556473829, Blast_Score=122, Evalue=4e-29, Organism=Escherichia coli, GI1786825, Length=279, Percent_Identity=30.8243727598566, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1790718, Length=315, Percent_Identity=27.3015873015873, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI87082125, Length=362, Percent_Identity=27.3480662983425, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI87081918, Length=303, Percent_Identity=30.6930693069307, Blast_Score=87, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562876, Length=363, Percent_Identity=32.5068870523416, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17562878, Length=364, Percent_Identity=32.6923076923077, Blast_Score=157, Evalue=6e-39, Organism=Caenorhabditis elegans, GI25146526, Length=255, Percent_Identity=26.2745098039216, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71997431, Length=255, Percent_Identity=25.4901960784314, Blast_Score=72, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6323099, Length=369, Percent_Identity=28.9972899728997, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6322619, Length=349, Percent_Identity=28.6532951289398, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6319955, Length=349, Percent_Identity=28.6532951289398, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6320033, Length=281, Percent_Identity=28.1138790035587, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6319257, Length=367, Percent_Identity=27.2479564032698, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6319258, Length=274, Percent_Identity=25.5474452554745, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323729, Length=309, Percent_Identity=24.5954692556634, Blast_Score=63, Evalue=7e-11, Organism=Drosophila melanogaster, GI17137530, Length=346, Percent_Identity=30.0578034682081, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI17737897, Length=359, Percent_Identity=29.5264623955432, Blast_Score=128, Evalue=6e-30, Organism=Drosophila melanogaster, GI17737895, Length=386, Percent_Identity=25.3886010362694, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI221457811, Length=346, Percent_Identity=23.4104046242775, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI45550770, Length=346, Percent_Identity=23.4104046242775, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI45551930, Length=346, Percent_Identity=23.4104046242775, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 39594; Mature: 39463
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQDNSKSMTAIVCHAPKDYRVERVTKPQARAHELVIRIAACGICASDCKCHSGAKMFW CCCCCCCCCEEEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE GGPSPWVKAPVIPGHEFFGYVEELGEGAAEHFDVKKGDRVIAEQIVPCGKCRYCRSGQYW CCCCCCEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCEE MCEVHNIFGFQREVADGGMAEYMRIPPTAIVHKIPDGISLEDAAIIEPLACAIHTVNRGD EEEEHHHHCHHHHHHCCCHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCC IQLDDVVVIAGAGPLGLMMTQVAHLKTPKKLVVIDLVDERLELAREYGADVTINPKNDDA EEECCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCEEECCCCCCH LAIVKSLTDNYGCDVYIETTGVPAGVNQGMDLIRKLGRFVEFSVFGAETTMDWSIIGDRK HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCH ELDVRGAHLGPYCYPVAIDLLARGLVTSKGIVTHGFSLEEWDEAIKVANSLDSIKVLLKP HCEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHEEEEEEC AR CC >Mature Secondary Structure TTQDNSKSMTAIVCHAPKDYRVERVTKPQARAHELVIRIAACGICASDCKCHSGAKMFW CCCCCCCCEEEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE GGPSPWVKAPVIPGHEFFGYVEELGEGAAEHFDVKKGDRVIAEQIVPCGKCRYCRSGQYW CCCCCCEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCEE MCEVHNIFGFQREVADGGMAEYMRIPPTAIVHKIPDGISLEDAAIIEPLACAIHTVNRGD EEEEHHHHCHHHHHHCCCHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCC IQLDDVVVIAGAGPLGLMMTQVAHLKTPKKLVVIDLVDERLELAREYGADVTINPKNDDA EEECCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCEEECCCCCCH LAIVKSLTDNYGCDVYIETTGVPAGVNQGMDLIRKLGRFVEFSVFGAETTMDWSIIGDRK HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCH ELDVRGAHLGPYCYPVAIDLLARGLVTSKGIVTHGFSLEEWDEAIKVANSLDSIKVLLKP HCEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHEEEEEEC AR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10086842; 11058132 [H]