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The map label for this gene is rbsC [H]

Identifier: 186475270

GI number: 186475270

Start: 573607

End: 574608

Strand: Direct

Name: rbsC [H]

Synonym: Bphy_0502

Alternate gene names: 186475270

Gene position: 573607-574608 (Clockwise)

Preceding gene: 186475269

Following gene: 186475271

Centisome position: 16.49

GC content: 63.77

Gene sequence:

>1002_bases
ATGAACACGCCTAACTCTTCTCCGAAGACCTCGACGGTTGCATCCGACACGCCGGGCGCGCCGTTGCGCCTGAACTGGGC
GAGCATCAAGCGCTCGACGCTGTTCTATCCGTTCATCGGTTTGCTCGTCGTGTGCATCGTGATGGTGTTCGCGAGCGACA
GCTTCCTGTCGGGCGCGAATCTGGAAAACGTGCTGCGCCAGGTGTCGATCAACGCGATCATCGCGGTCGGCATGACGGCC
GTGATCCTGACGGGCGGCATCGATCTGTCCGTCGGCTCCGTGATGGCGCTATCGGGCACGCTCGCCGCCGGCTTGATGGT
GGCGGGACTCAACGGCGTCGCGGCGATCGTCATCGGCGTTGCGGTGGGGCTCGGCTTCGGCGTCGCGAACGGCTTCTTCG
TCGCGTTCGCGGGTATGCCGCCCATCATCGTCACGCTCGCAACGATGGGCATTGCGCGCGGCCTCGCGCTCATCTACACG
GGCGGCTATCCGATCGACGGCTTGCCCGAATGGGTCAGCTTCTTCGGCAGCGGCAAGGTGTTCGGCATTCAGGCGCCCGT
GCTCATCATGCTCGTGGTCTATGCGATTGCGTGGCTGCTGCTCGAACGCATGCCGTTCGGCCGCTACGTGTATGCGATAG
GCGGCAACGAACAGGCGACGCGTCTGTCTGGCGTTCGCGTCGCGCGCGTGAAGCTGATCGTCTACACGATTGCCGGGCTC
ACGTCTTCGCTTGCGGCCATTGTGTTGACGTCGCGCCTGATGAGCGGCCAGCCGAACGCGGGTGTCGGCTTCGAGCTCGA
TGCGATCGCGGCCGTGGTGATGGGCGGCACGTCGATCTCGGGCGGACGCGGCTCGATCATCGGCACGCTGATCGGTGCGC
TGCTGCTCGGCGTGCTGAACAACGGCCTGAACATGGTCGGCGTGAATCCGTATGTGCAGAACGTGATCAAGGGCGGAATC
ATTCTGCTCGCGATCTACATCAGCCGCGAACGCAAGAAGTAA

Upstream 100 bases:

>100_bases
CGCATCGAAGCGATTCTCGAAGGCGAGCAGATCGAATCGAATGCCGTGATGACTTATGCAACGGCTGGTGCAACAGCCGG
CACTCGTGGAGCAATGCAGC

Downstream 100 bases:

>100_bases
CGGTTCCCTTTCCTCTGTTCTCCACTTACAAGCAGGGCAATGCAATGACTACTCAGGACAACAGCAAAAGCATGACGGCG
ATCGTGTGTCACGCGCCGAA

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MNTPNSSPKTSTVASDTPGAPLRLNWASIKRSTLFYPFIGLLVVCIVMVFASDSFLSGANLENVLRQVSINAIIAVGMTA
VILTGGIDLSVGSVMALSGTLAAGLMVAGLNGVAAIVIGVAVGLGFGVANGFFVAFAGMPPIIVTLATMGIARGLALIYT
GGYPIDGLPEWVSFFGSGKVFGIQAPVLIMLVVYAIAWLLLERMPFGRYVYAIGGNEQATRLSGVRVARVKLIVYTIAGL
TSSLAAIVLTSRLMSGQPNAGVGFELDAIAAVVMGGTSISGGRGSIIGTLIGALLLGVLNNGLNMVGVNPYVQNVIKGGI
ILLAIYISRERKK

Sequences:

>Translated_333_residues
MNTPNSSPKTSTVASDTPGAPLRLNWASIKRSTLFYPFIGLLVVCIVMVFASDSFLSGANLENVLRQVSINAIIAVGMTA
VILTGGIDLSVGSVMALSGTLAAGLMVAGLNGVAAIVIGVAVGLGFGVANGFFVAFAGMPPIIVTLATMGIARGLALIYT
GGYPIDGLPEWVSFFGSGKVFGIQAPVLIMLVVYAIAWLLLERMPFGRYVYAIGGNEQATRLSGVRVARVKLIVYTIAGL
TSSLAAIVLTSRLMSGQPNAGVGFELDAIAAVVMGGTSISGGRGSIIGTLIGALLLGVLNNGLNMVGVNPYVQNVIKGGI
ILLAIYISRERKK
>Mature_333_residues
MNTPNSSPKTSTVASDTPGAPLRLNWASIKRSTLFYPFIGLLVVCIVMVFASDSFLSGANLENVLRQVSINAIIAVGMTA
VILTGGIDLSVGSVMALSGTLAAGLMVAGLNGVAAIVIGVAVGLGFGVANGFFVAFAGMPPIIVTLATMGIARGLALIYT
GGYPIDGLPEWVSFFGSGKVFGIQAPVLIMLVVYAIAWLLLERMPFGRYVYAIGGNEQATRLSGVRVARVKLIVYTIAGL
TSSLAAIVLTSRLMSGQPNAGVGFELDAIAAVVMGGTSISGGRGSIIGTLIGALLLGVLNNGLNMVGVNPYVQNVIKGGI
ILLAIYISRERKK

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=299, Percent_Identity=48.1605351170569, Blast_Score=251, Evalue=6e-68,
Organism=Escherichia coli, GI1790524, Length=332, Percent_Identity=38.5542168674699, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI145693152, Length=344, Percent_Identity=36.046511627907, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1789992, Length=363, Percent_Identity=34.7107438016529, Blast_Score=164, Evalue=8e-42,
Organism=Escherichia coli, GI1788896, Length=295, Percent_Identity=35.9322033898305, Blast_Score=157, Evalue=8e-40,
Organism=Escherichia coli, GI1788471, Length=331, Percent_Identity=35.9516616314199, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI145693214, Length=284, Percent_Identity=33.4507042253521, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI87082395, Length=286, Percent_Identity=37.7622377622378, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1787793, Length=285, Percent_Identity=35.0877192982456, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1787794, Length=270, Percent_Identity=33.7037037037037, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34265; Mature: 34265

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPNSSPKTSTVASDTPGAPLRLNWASIKRSTLFYPFIGLLVVCIVMVFASDSFLSGAN
CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LENVLRQVSINAIIAVGMTAVILTGGIDLSVGSVMALSGTLAAGLMVAGLNGVAAIVIGV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AVGLGFGVANGFFVAFAGMPPIIVTLATMGIARGLALIYTGGYPIDGLPEWVSFFGSGKV
HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCE
FGIQAPVLIMLVVYAIAWLLLERMPFGRYVYAIGGNEQATRLSGVRVARVKLIVYTIAGL
EEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHH
TSSLAAIVLTSRLMSGQPNAGVGFELDAIAAVVMGGTSISGGRGSIIGTLIGALLLGVLN
HHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
NGLNMVGVNPYVQNVIKGGIILLAIYISRERKK
CCCCEEECCHHHHHHHCCCCEEEEEEHHHCCCC
>Mature Secondary Structure
MNTPNSSPKTSTVASDTPGAPLRLNWASIKRSTLFYPFIGLLVVCIVMVFASDSFLSGAN
CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LENVLRQVSINAIIAVGMTAVILTGGIDLSVGSVMALSGTLAAGLMVAGLNGVAAIVIGV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AVGLGFGVANGFFVAFAGMPPIIVTLATMGIARGLALIYTGGYPIDGLPEWVSFFGSGKV
HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCE
FGIQAPVLIMLVVYAIAWLLLERMPFGRYVYAIGGNEQATRLSGVRVARVKLIVYTIAGL
EEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHH
TSSLAAIVLTSRLMSGQPNAGVGFELDAIAAVVMGGTSISGGRGSIIGTLIGALLLGVLN
HHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
NGLNMVGVNPYVQNVIKGGIILLAIYISRERKK
CCCCEEECCHHHHHHHCCCCEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]