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The map label for this gene is fimA [H]

Identifier: 186475214

GI number: 186475214

Start: 506140

End: 506757

Strand: Direct

Name: fimA [H]

Synonym: Bphy_0446

Alternate gene names: 186475214

Gene position: 506140-506757 (Clockwise)

Preceding gene: 186475213

Following gene: 186475215

Centisome position: 14.55

GC content: 66.67

Gene sequence:

>618_bases
ATGATCGCTACCGTTGCCGTTGCTTCGTTGTCCACGCTTTATGCTCATCGCCCGGGCATCCGTGCGCCGCGCGTCTGGCC
TGCCGCGCTCGCGCGTATCAGGCGTCTGTGGGGCTTTACGCTGATCGAACTGATGATTGTGCTGGCCATTGTCGGCGTGA
TCGCCGCATATGCGATTCCGGCCTATCAGGACTATCTGGCGCGCAGCCGCGTCGGCGAGGGGATGTCGCTCGCGGCCGCC
GCGCAACTGACGGTGGGCGAGAACGCGGGCAGTGGCAATGCCTTCGGCAGTGGCTACGCATCGCCGCCCGCCACGCGCAA
CGTTCAGTCGATCCATATCGACGACGACACGGGCCAGATTACCGTCGCGTTCACCGCGCGCGTGGCGGACGAAGGCTCGA
ATACGATCGTGTTCGTGCCGTCCGCGCCTGACAATGCCGACACGCCGACTGCCCGCGTCGCACTGGCGAAAGGTTCCGTG
CAGAAGGGAACCATCACGTGGGAATGCTTCGCGGGCGGCAAGGCAGCGTCGTCGTTGCCGGCGCCGGGATCGGGGCCGCT
GCCCGTCGACGCGCCCACGCTGGCGGGAAATCTAGCGCCGCCGGAGTGTCGCAGCTGA

Upstream 100 bases:

>100_bases
TAGCCATCTGGCTGACTGCCGGCGCCAACTGCCGCTCGCTACGATCGAAGCGCCTGTCCTGATTCCCGGGGCAGGCGCTT
TCGTTTCGAGGAGTCTGCTG

Downstream 100 bases:

>100_bases
TTGGGGGGCGACGTTCGGTGACGTGAGCCCGGTATAAAGCGGCCGGACATCGATGGCCGCGGCAAAAGTTTCCGTGCTGC
GGACGGATTCCGGCTTATTT

Product: putative type IV fimbrial pilin protein

Products: NA

Alternate protein names: Pilin; Serogroup C1 [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIATVAVASLSTLYAHRPGIRAPRVWPAALARIRRLWGFTLIELMIVLAIVGVIAAYAIPAYQDYLARSRVGEGMSLAAA
AQLTVGENAGSGNAFGSGYASPPATRNVQSIHIDDDTGQITVAFTARVADEGSNTIVFVPSAPDNADTPTARVALAKGSV
QKGTITWECFAGGKAASSLPAPGSGPLPVDAPTLAGNLAPPECRS

Sequences:

>Translated_205_residues
MIATVAVASLSTLYAHRPGIRAPRVWPAALARIRRLWGFTLIELMIVLAIVGVIAAYAIPAYQDYLARSRVGEGMSLAAA
AQLTVGENAGSGNAFGSGYASPPATRNVQSIHIDDDTGQITVAFTARVADEGSNTIVFVPSAPDNADTPTARVALAKGSV
QKGTITWECFAGGKAASSLPAPGSGPLPVDAPTLAGNLAPPECRS
>Mature_205_residues
MIATVAVASLSTLYAHRPGIRAPRVWPAALARIRRLWGFTLIELMIVLAIVGVIAAYAIPAYQDYLARSRVGEGMSLAAA
AQLTVGENAGSGNAFGSGYASPPATRNVQSIHIDDDTGQITVAFTARVADEGSNTIVFVPSAPDNADTPTARVALAKGSV
QKGTITWECFAGGKAASSLPAPGSGPLPVDAPTLAGNLAPPECRS

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 21026; Mature: 21026

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATVAVASLSTLYAHRPGIRAPRVWPAALARIRRLWGFTLIELMIVLAIVGVIAAYAIP
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYQDYLARSRVGEGMSLAAAAQLTVGENAGSGNAFGSGYASPPATRNVQSIHIDDDTGQI
HHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEE
TVAFTARVADEGSNTIVFVPSAPDNADTPTARVALAKGSVQKGTITWECFAGGKAASSLP
EEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCC
APGSGPLPVDAPTLAGNLAPPECRS
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIATVAVASLSTLYAHRPGIRAPRVWPAALARIRRLWGFTLIELMIVLAIVGVIAAYAIP
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYQDYLARSRVGEGMSLAAAAQLTVGENAGSGNAFGSGYASPPATRNVQSIHIDDDTGQI
HHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEE
TVAFTARVADEGSNTIVFVPSAPDNADTPTARVALAKGSVQKGTITWECFAGGKAASSLP
EEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCC
APGSGPLPVDAPTLAGNLAPPECRS
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1675419 [H]