| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yjbE [H]
Identifier: 186475213
GI number: 186475213
Start: 505276
End: 505989
Strand: Direct
Name: yjbE [H]
Synonym: Bphy_0445
Alternate gene names: 186475213
Gene position: 505276-505989 (Clockwise)
Preceding gene: 186475212
Following gene: 186475214
Centisome position: 14.52
GC content: 66.53
Gene sequence:
>714_bases ATGCTCGAATTCCTCACCACGCTTCATTGGGGCGCCGTCTTCCAGATCATCGTCATCGACATCCTGCTGGGTGGCGACAA CGCCGTCGTGATCGCGCTCGCCTGCCGCAACCTGCCGCCTGCGCAGCGCACGAAGGGCGTGCTGTGGGGCACGCTCGGCG CGATCGCGCTGCGCGTGGCGCTGATTGCGTTTGCCGTCGCATTGCTCGATGTGCCGTTGCTCAAGTTCGCGGGCGGCCTG TTGCTCATCTGGATCGGCGTGCGTCTGCTCGCGCCTGCGCCGGACGCGCACGCGAACGTCAAGCCCGCCGACAAGCTGGT CACCGCGATCAAGACGATCATCGTGGCCGACGCCGTGATGAGCCTCGACAACGTAATCGCAATCGCCGGCGCCGCCGAGT CCGCCGAGCCGCATCACCGCATCGCGCTCGTCGTGTTCGGGCTGATCGTGAGCATCCCGTTGATCGTCTGGGGCAGCCAG CTGGTGCTCAAGCTGCTGGACCGCTTCCCCGCCATCGTCACGTTCGGCGGAGCGTTGCTCGGATGGATCGCGGGCGGCCT GATCATTAACGATCCAGCGGGCGACCGTTGGCCGATCCTCGACACGCCCGTGGCCGAATACGGCATGAGCATCGTTTGCG CGCTGTTCGTCGTGATCGTCGGCTACGCGCTGAAGCGGCGCAACGCCGCGCGCGTCGCCGGCGACTCGCATTGA
Upstream 100 bases:
>100_bases GAAGGCCTTTCGTAAGACGCAGCGACAAGCGAGGGAGCGAGCAATTGCTGCCTCGCTTTTTTGTTGCCGTTCGCTTTCGC CACCTTCTATCCTGCTTTCC
Downstream 100 bases:
>100_bases GCACATCCACTGTACGGGCACCTTGGCCCGCACGCCATTCGCCATTCGGCTAGCCATCTGGCTGACTGCCGGCGCCAACT GCCGCTCGCTACGATCGAAG
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MLEFLTTLHWGAVFQIIVIDILLGGDNAVVIALACRNLPPAQRTKGVLWGTLGAIALRVALIAFAVALLDVPLLKFAGGL LLIWIGVRLLAPAPDAHANVKPADKLVTAIKTIIVADAVMSLDNVIAIAGAAESAEPHHRIALVVFGLIVSIPLIVWGSQ LVLKLLDRFPAIVTFGGALLGWIAGGLIINDPAGDRWPILDTPVAEYGMSIVCALFVVIVGYALKRRNAARVAGDSH
Sequences:
>Translated_237_residues MLEFLTTLHWGAVFQIIVIDILLGGDNAVVIALACRNLPPAQRTKGVLWGTLGAIALRVALIAFAVALLDVPLLKFAGGL LLIWIGVRLLAPAPDAHANVKPADKLVTAIKTIIVADAVMSLDNVIAIAGAAESAEPHHRIALVVFGLIVSIPLIVWGSQ LVLKLLDRFPAIVTFGGALLGWIAGGLIINDPAGDRWPILDTPVAEYGMSIVCALFVVIVGYALKRRNAARVAGDSH >Mature_237_residues MLEFLTTLHWGAVFQIIVIDILLGGDNAVVIALACRNLPPAQRTKGVLWGTLGAIALRVALIAFAVALLDVPLLKFAGGL LLIWIGVRLLAPAPDAHANVKPADKLVTAIKTIIVADAVMSLDNVIAIAGAAESAEPHHRIALVVFGLIVSIPLIVWGSQ LVLKLLDRFPAIVTFGGALLGWIAGGLIINDPAGDRWPILDTPVAEYGMSIVCALFVVIVGYALKRRNAARVAGDSH
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022301 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 24971; Mature: 24971
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEFLTTLHWGAVFQIIVIDILLGGDNAVVIALACRNLPPAQRTKGVLWGTLGAIALRVA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHH LIAFAVALLDVPLLKFAGGLLLIWIGVRLLAPAPDAHANVKPADKLVTAIKTIIVADAVM HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SLDNVIAIAGAAESAEPHHRIALVVFGLIVSIPLIVWGSQLVLKLLDRFPAIVTFGGALL HHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWIAGGLIINDPAGDRWPILDTPVAEYGMSIVCALFVVIVGYALKRRNAARVAGDSH HHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC >Mature Secondary Structure MLEFLTTLHWGAVFQIIVIDILLGGDNAVVIALACRNLPPAQRTKGVLWGTLGAIALRVA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHH LIAFAVALLDVPLLKFAGGLLLIWIGVRLLAPAPDAHANVKPADKLVTAIKTIIVADAVM HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SLDNVIAIAGAAESAEPHHRIALVVFGLIVSIPLIVWGSQLVLKLLDRFPAIVTFGGALL HHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWIAGGLIINDPAGDRWPILDTPVAEYGMSIVCALFVVIVGYALKRRNAARVAGDSH HHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]