Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yjbE [H]

Identifier: 186475213

GI number: 186475213

Start: 505276

End: 505989

Strand: Direct

Name: yjbE [H]

Synonym: Bphy_0445

Alternate gene names: 186475213

Gene position: 505276-505989 (Clockwise)

Preceding gene: 186475212

Following gene: 186475214

Centisome position: 14.52

GC content: 66.53

Gene sequence:

>714_bases
ATGCTCGAATTCCTCACCACGCTTCATTGGGGCGCCGTCTTCCAGATCATCGTCATCGACATCCTGCTGGGTGGCGACAA
CGCCGTCGTGATCGCGCTCGCCTGCCGCAACCTGCCGCCTGCGCAGCGCACGAAGGGCGTGCTGTGGGGCACGCTCGGCG
CGATCGCGCTGCGCGTGGCGCTGATTGCGTTTGCCGTCGCATTGCTCGATGTGCCGTTGCTCAAGTTCGCGGGCGGCCTG
TTGCTCATCTGGATCGGCGTGCGTCTGCTCGCGCCTGCGCCGGACGCGCACGCGAACGTCAAGCCCGCCGACAAGCTGGT
CACCGCGATCAAGACGATCATCGTGGCCGACGCCGTGATGAGCCTCGACAACGTAATCGCAATCGCCGGCGCCGCCGAGT
CCGCCGAGCCGCATCACCGCATCGCGCTCGTCGTGTTCGGGCTGATCGTGAGCATCCCGTTGATCGTCTGGGGCAGCCAG
CTGGTGCTCAAGCTGCTGGACCGCTTCCCCGCCATCGTCACGTTCGGCGGAGCGTTGCTCGGATGGATCGCGGGCGGCCT
GATCATTAACGATCCAGCGGGCGACCGTTGGCCGATCCTCGACACGCCCGTGGCCGAATACGGCATGAGCATCGTTTGCG
CGCTGTTCGTCGTGATCGTCGGCTACGCGCTGAAGCGGCGCAACGCCGCGCGCGTCGCCGGCGACTCGCATTGA

Upstream 100 bases:

>100_bases
GAAGGCCTTTCGTAAGACGCAGCGACAAGCGAGGGAGCGAGCAATTGCTGCCTCGCTTTTTTGTTGCCGTTCGCTTTCGC
CACCTTCTATCCTGCTTTCC

Downstream 100 bases:

>100_bases
GCACATCCACTGTACGGGCACCTTGGCCCGCACGCCATTCGCCATTCGGCTAGCCATCTGGCTGACTGCCGGCGCCAACT
GCCGCTCGCTACGATCGAAG

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MLEFLTTLHWGAVFQIIVIDILLGGDNAVVIALACRNLPPAQRTKGVLWGTLGAIALRVALIAFAVALLDVPLLKFAGGL
LLIWIGVRLLAPAPDAHANVKPADKLVTAIKTIIVADAVMSLDNVIAIAGAAESAEPHHRIALVVFGLIVSIPLIVWGSQ
LVLKLLDRFPAIVTFGGALLGWIAGGLIINDPAGDRWPILDTPVAEYGMSIVCALFVVIVGYALKRRNAARVAGDSH

Sequences:

>Translated_237_residues
MLEFLTTLHWGAVFQIIVIDILLGGDNAVVIALACRNLPPAQRTKGVLWGTLGAIALRVALIAFAVALLDVPLLKFAGGL
LLIWIGVRLLAPAPDAHANVKPADKLVTAIKTIIVADAVMSLDNVIAIAGAAESAEPHHRIALVVFGLIVSIPLIVWGSQ
LVLKLLDRFPAIVTFGGALLGWIAGGLIINDPAGDRWPILDTPVAEYGMSIVCALFVVIVGYALKRRNAARVAGDSH
>Mature_237_residues
MLEFLTTLHWGAVFQIIVIDILLGGDNAVVIALACRNLPPAQRTKGVLWGTLGAIALRVALIAFAVALLDVPLLKFAGGL
LLIWIGVRLLAPAPDAHANVKPADKLVTAIKTIIVADAVMSLDNVIAIAGAAESAEPHHRIALVVFGLIVSIPLIVWGSQ
LVLKLLDRFPAIVTFGGALLGWIAGGLIINDPAGDRWPILDTPVAEYGMSIVCALFVVIVGYALKRRNAARVAGDSH

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022301 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 24971; Mature: 24971

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEFLTTLHWGAVFQIIVIDILLGGDNAVVIALACRNLPPAQRTKGVLWGTLGAIALRVA
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHH
LIAFAVALLDVPLLKFAGGLLLIWIGVRLLAPAPDAHANVKPADKLVTAIKTIIVADAVM
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SLDNVIAIAGAAESAEPHHRIALVVFGLIVSIPLIVWGSQLVLKLLDRFPAIVTFGGALL
HHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWIAGGLIINDPAGDRWPILDTPVAEYGMSIVCALFVVIVGYALKRRNAARVAGDSH
HHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MLEFLTTLHWGAVFQIIVIDILLGGDNAVVIALACRNLPPAQRTKGVLWGTLGAIALRVA
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHH
LIAFAVALLDVPLLKFAGGLLLIWIGVRLLAPAPDAHANVKPADKLVTAIKTIIVADAVM
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SLDNVIAIAGAAESAEPHHRIALVVFGLIVSIPLIVWGSQLVLKLLDRFPAIVTFGGALL
HHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWIAGGLIINDPAGDRWPILDTPVAEYGMSIVCALFVVIVGYALKRRNAARVAGDSH
HHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]