| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yebZ [C]
Identifier: 186475200
GI number: 186475200
Start: 490588
End: 491517
Strand: Direct
Name: yebZ [C]
Synonym: Bphy_0431
Alternate gene names: 186475200
Gene position: 490588-491517 (Clockwise)
Preceding gene: 186475199
Following gene: 186475203
Centisome position: 14.1
GC content: 65.7
Gene sequence:
>930_bases ATGAAAGTCGACGGATTGTGGATCGGGCAGGTCGCCATGGCTGTGCTCATGAATGTTGCGTTCGCGTTTGCCGTCGGTTC GGCATTGCTCGGCGCGTGGCTCGCCAACGATGCGCAGGCCAGGATCGCGCCCGCGCGCCCGGCATGGTTGCGGGCGCAGC GGTCGATGCAGGCTTCCGCGATCGTGCTGGTGCTGGCCGACCTTGGCTGGCTGCTCTATCAGGCGGCTGAGATGGCGGGC GTGCGCCTGCCTGAAGCCTTCGGTGTCGTGCCGACGATGCTGTCGCAAACGCACGTCGGCTTTGGCTGGAGTGTCGCGTT TGCGGGCGCGCTCGTGCTGGTGCTCGTGTCGTTCGCACGACAGACCAATGTGTTGCGCAATGCGCTGCTGTGGCTCGCCG TGATCGCGATCGCGGGTGGCAAGGCGGCGCTGGGTCACGCCGCCGATGCAGGCGTGGCATCGGCGGCGATCGGCATGCAC ACGGTTCACGTGCTCACGACATCGGTGTGGGGCGGACTCGTGCTCGCGGCAGGTTTGTCGGTGCTGCCCGCGCTCGGCAC GTCGATCGCTCGCGGCGTGCTGATCCGCACGGCGACGCAACTGTCGAATGTGTCGCTCGTCGCCGTCGTGTTCGTTCTGC TATCGGGCGTGTTCAACGCGGCGCGAGGGGCGGGCAATTCGTTTCTAGCGATTGAAACGAGCACGTGGGGGCACGTGCTG CTGCTCAAACTCGCGCTGGTTGCACTGGCGCTGGTGCTAGGCGGGCTGAACCGCTTTCAGGCATTGCCGCGATTGCGCCG CACGGCTTCGACGATGGATGCACATACGTTTTCCAATCTGCTGTATCTCGAAGCGCTCGCGATGCTCGGCGTCTTCGCTG CGGCAGCTGTGCTGTCGCACAGCGTGCCGGGTTTCGCAGCGCTCGGCTGA
Upstream 100 bases:
>100_bases TCACGTTGCAGTCGTTGGCGCCCGGGCGTTACACCGTGCAATGGGCGGCAGTCGCCGAAGACGGGCATCGCACGAAGGGC AGCTACGGGTTCAGCGTCAA
Downstream 100 bases:
>100_bases GCGCGAGGTTGCGGCGTCGGCGCAGGCACGCAGCGGGTCATTCATAACCCAGCTTGTGCCTGACGACGGGTGCAAGGACC AGCACGATCGCGCAGCCCCC
Product: copper resistance D domain-containing protein
Products: NA
Alternate protein names: Copper Resistance D Domain-Containing Protein; Copper Resistance D; Copper Resistance Protein
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKVDGLWIGQVAMAVLMNVAFAFAVGSALLGAWLANDAQARIAPARPAWLRAQRSMQASAIVLVLADLGWLLYQAAEMAG VRLPEAFGVVPTMLSQTHVGFGWSVAFAGALVLVLVSFARQTNVLRNALLWLAVIAIAGGKAALGHAADAGVASAAIGMH TVHVLTTSVWGGLVLAAGLSVLPALGTSIARGVLIRTATQLSNVSLVAVVFVLLSGVFNAARGAGNSFLAIETSTWGHVL LLKLALVALALVLGGLNRFQALPRLRRTASTMDAHTFSNLLYLEALAMLGVFAAAAVLSHSVPGFAALG
Sequences:
>Translated_309_residues MKVDGLWIGQVAMAVLMNVAFAFAVGSALLGAWLANDAQARIAPARPAWLRAQRSMQASAIVLVLADLGWLLYQAAEMAG VRLPEAFGVVPTMLSQTHVGFGWSVAFAGALVLVLVSFARQTNVLRNALLWLAVIAIAGGKAALGHAADAGVASAAIGMH TVHVLTTSVWGGLVLAAGLSVLPALGTSIARGVLIRTATQLSNVSLVAVVFVLLSGVFNAARGAGNSFLAIETSTWGHVL LLKLALVALALVLGGLNRFQALPRLRRTASTMDAHTFSNLLYLEALAMLGVFAAAAVLSHSVPGFAALG >Mature_309_residues MKVDGLWIGQVAMAVLMNVAFAFAVGSALLGAWLANDAQARIAPARPAWLRAQRSMQASAIVLVLADLGWLLYQAAEMAG VRLPEAFGVVPTMLSQTHVGFGWSVAFAGALVLVLVSFARQTNVLRNALLWLAVIAIAGGKAALGHAADAGVASAAIGMH TVHVLTTSVWGGLVLAAGLSVLPALGTSIARGVLIRTATQLSNVSLVAVVFVLLSGVFNAARGAGNSFLAIETSTWGHVL LLKLALVALALVLGGLNRFQALPRLRRTASTMDAHTFSNLLYLEALAMLGVFAAAAVLSHSVPGFAALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral membrane protein. Inner membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31830; Mature: 31830
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVDGLWIGQVAMAVLMNVAFAFAVGSALLGAWLANDAQARIAPARPAWLRAQRSMQASA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH IVLVLADLGWLLYQAAEMAGVRLPEAFGVVPTMLSQTHVGFGWSVAFAGALVLVLVSFAR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QTNVLRNALLWLAVIAIAGGKAALGHAADAGVASAAIGMHTVHVLTTSVWGGLVLAAGLS HHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLPALGTSIARGVLIRTATQLSNVSLVAVVFVLLSGVFNAARGAGNSFLAIETSTWGHVL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH LLKLALVALALVLGGLNRFQALPRLRRTASTMDAHTFSNLLYLEALAMLGVFAAAAVLSH HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SVPGFAALG CCCCCCCCC >Mature Secondary Structure MKVDGLWIGQVAMAVLMNVAFAFAVGSALLGAWLANDAQARIAPARPAWLRAQRSMQASA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH IVLVLADLGWLLYQAAEMAGVRLPEAFGVVPTMLSQTHVGFGWSVAFAGALVLVLVSFAR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QTNVLRNALLWLAVIAIAGGKAALGHAADAGVASAAIGMHTVHVLTTSVWGGLVLAAGLS HHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLPALGTSIARGVLIRTATQLSNVSLVAVVFVLLSGVFNAARGAGNSFLAIETSTWGHVL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH LLKLALVALALVLGGLNRFQALPRLRRTASTMDAHTFSNLLYLEALAMLGVFAAAAVLSH HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SVPGFAALG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA