| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475149
Identifier: 186475149
GI number: 186475149
Start: 430707
End: 431363
Strand: Direct
Name: 186475149
Synonym: Bphy_0380
Alternate gene names: NA
Gene position: 430707-431363 (Clockwise)
Preceding gene: 186475148
Following gene: 186475150
Centisome position: 12.38
GC content: 61.95
Gene sequence:
>657_bases ATGACGACGAAAAAGACGACGCTCAAATCGGTGTTTCTGACGGGCCTGCTGGTGCTGGTGCCTCTCGCCATCACGTTGTG GGTGCTTGGCCTGATCATCGGCACGATGGATCAGACGCTGCTGTTGCTGCCCCGTTCGTGGCAGCCTGAACGGCTGCTCG GCTTCCGCCTGCCCGGCCTTGGCGCCGTGCTGACGCTCGCTTTCATTTTTGTCGTCGGACTATTGACGCAGAACTTCGTT GGGCAGAAGCTGGTCGGCTGGTGGGAACTGGTCGTTGCGCGCATTCCCGTCGTCGGCCCGATCTATACCAGCGTCAAACA GGTGTCCGACACGCTGCTGTCGTCGAGCGGCAACGCGTTCCGCAAGGCGCTGCTGATCGAATATCCGCGCAAAGGGTCCT ACACCATCGGGTTTCTGACGGGCATTCCCGGCGGCGACGTGGTCAATCATCTCCAGGAAGACCACGTCAGCGTGTATGTG CCGACCACGCCGAACCCGACGTCCGGCTTCTTCCTGATCGTGCCGAAGGCCGAAGTAATCGAGCTCGATATGACCGTCGA CGCCGCACTCAAGTACATCGTCTCGATGGGCGTCGTCGCTCCGCCGGCCAATCAGCCGCTGCCGGAGCGCCGCACGCCTG TCGAGCCACCGCTGTAA
Upstream 100 bases:
>100_bases CCTGCTCCCGCCAGCAGCTCGGGCACCTAGCAGTTTCGCCGCCTCGACGAGGTGACGTAGACGCCGCGCAACGCAGTCGC GCGGATTTCTGGCGGTACAC
Downstream 100 bases:
>100_bases TGCCGGCTCGCGCCGACCACAACCTGGTATGGCGCGCGCCGTTCAACTAATGCAAAACGAAAGACAAACATCATGTCGAT GAGATCTGAATACTGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTTKKTTLKSVFLTGLLVLVPLAITLWVLGLIIGTMDQTLLLLPRSWQPERLLGFRLPGLGAVLTLAFIFVVGLLTQNFV GQKLVGWWELVVARIPVVGPIYTSVKQVSDTLLSSSGNAFRKALLIEYPRKGSYTIGFLTGIPGGDVVNHLQEDHVSVYV PTTPNPTSGFFLIVPKAEVIELDMTVDAALKYIVSMGVVAPPANQPLPERRTPVEPPL
Sequences:
>Translated_218_residues MTTKKTTLKSVFLTGLLVLVPLAITLWVLGLIIGTMDQTLLLLPRSWQPERLLGFRLPGLGAVLTLAFIFVVGLLTQNFV GQKLVGWWELVVARIPVVGPIYTSVKQVSDTLLSSSGNAFRKALLIEYPRKGSYTIGFLTGIPGGDVVNHLQEDHVSVYV PTTPNPTSGFFLIVPKAEVIELDMTVDAALKYIVSMGVVAPPANQPLPERRTPVEPPL >Mature_217_residues TTKKTTLKSVFLTGLLVLVPLAITLWVLGLIIGTMDQTLLLLPRSWQPERLLGFRLPGLGAVLTLAFIFVVGLLTQNFVG QKLVGWWELVVARIPVVGPIYTSVKQVSDTLLSSSGNAFRKALLIEYPRKGSYTIGFLTGIPGGDVVNHLQEDHVSVYVP TTPNPTSGFFLIVPKAEVIELDMTVDAALKYIVSMGVVAPPANQPLPERRTPVEPPL
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23711; Mature: 23580
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKKTTLKSVFLTGLLVLVPLAITLWVLGLIIGTMDQTLLLLPRSWQPERLLGFRLPGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHEECCCCH GAVLTLAFIFVVGLLTQNFVGQKLVGWWELVVARIPVVGPIYTSVKQVSDTLLSSSGNAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH RKALLIEYPRKGSYTIGFLTGIPGGDVVNHLQEDHVSVYVPTTPNPTSGFFLIVPKAEVI HHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCEEE ELDMTVDAALKYIVSMGVVAPPANQPLPERRTPVEPPL EECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTKKTTLKSVFLTGLLVLVPLAITLWVLGLIIGTMDQTLLLLPRSWQPERLLGFRLPGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHEECCCCH GAVLTLAFIFVVGLLTQNFVGQKLVGWWELVVARIPVVGPIYTSVKQVSDTLLSSSGNAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH RKALLIEYPRKGSYTIGFLTGIPGGDVVNHLQEDHVSVYVPTTPNPTSGFFLIVPKAEVI HHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCEEE ELDMTVDAALKYIVSMGVVAPPANQPLPERRTPVEPPL EECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA