| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475144
Identifier: 186475144
GI number: 186475144
Start: 426142
End: 427137
Strand: Direct
Name: 186475144
Synonym: Bphy_0375
Alternate gene names: NA
Gene position: 426142-427137 (Clockwise)
Preceding gene: 186475143
Following gene: 186475145
Centisome position: 12.25
GC content: 65.86
Gene sequence:
>996_bases ATGTCCGATTCGAATATGTCATCTCGTTGTAAGGTTAAGGGGTCGTGGGCGAGGAGAATCGGACTGATCGCGATGGTCGG CCTGATCTCCGTGGGCACGCTGGCCTCTCTCGACGCCGAGGCGAAACGCATGGGCGGCGGCCGCACCATGGGGCGTCAGT CCAACATCACGCAGCCGCAACAGCAGACGTCGCCGTCACCTTCGCAGTCGCCGGGCGCGCCGTCGCAAGCCATGCAGCAG CAGCGCCCCGCGACGCCCGCGCCCACGCCCGCCGCGCAGCCCAACCGTTCGCGCTGGCTGGGGCCGATCGCGGGTCTCGC GGCAGGTCTCGGTATCGCCGCGTTGCTGTCCCACTTTGGTCTGGGCGAGGCGTTCGCCGGCATGATGGCGAACATGATCG TGATCGCGCTGATCGCGTTCGTTGCAATCTGGCTGATCCGCAAATTCGTTGGCCGCAAGCGTAACGCGCAGACGCCCGCC TACGCAGGCGGCTCGCCGACGCTGAACGCGGGCGGCACGGGCTACTCGCAGGAACCGCGCTACACGGCGCCGCCCACGGG CTCGTATCTCGGGCCGCAAGGCAATCCGCTGACGACGCCCGATATCGCCGCCACGCCGGCCGTTCCGGCTGGTTTCGACT CGGAAGCCTTCCTGCGCAACGCGAAGGTCTACTTCGTGCGCCTGCAGGCTGCCTGGGATGCCGGCAATATGGACGACATC CGTGAGTTCACAACGCCTGAAATGTTCGCCGAAGTGAGGGTCGACCTGAGCTCGCGCGGCGCCGAGAAGAACCAGACCGA CGTCGTGAAACTCGACGCCGATCTGCTGGGCGTCGAGGATCGCGGCAGCGAATACCTGGCCAGCGTTCGTTTCCACGGGC TGATCCGTGAAACAGTGGGGGGCTCGGCCGAACCGTTCGAAGAAATCTGGAACCTGTCCAAACGCACCGGCGAAGGCTGG CTGCTCGCGGGTATCCAGCAGGCGAACCTTCACTGA
Upstream 100 bases:
>100_bases CGCCGTCAAATATTACAATTTGTCAGCTGGCGTGGTAGCCTTGCATGTGGGGACGAAATACTGATGTCCTAACCTCCCGT TTTTAAAGGAAATTGAGAAA
Downstream 100 bases:
>100_bases TCCCGTAAAGGATTAGCCGTTCGGCAGAGCCAGGCTCGAAGCGAACGGACGTTACAATAGGAACCCGCGTCGGCAGTCGC CGGCGCGGGTTTTCTCTTTC
Product: import inner membrane translocase subunit Tim44
Products: NA
Alternate protein names: Transmembrane Protein; Tim44 Domain Protein; Hypothtical Protein; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein; Tim44-Like Domain-Contain Protein; Tim44-Like Domain Protein
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSDSNMSSRCKVKGSWARRIGLIAMVGLISVGTLASLDAEAKRMGGGRTMGRQSNITQPQQQTSPSPSQSPGAPSQAMQQ QRPATPAPTPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGEAFAGMMANMIVIALIAFVAIWLIRKFVGRKRNAQTPA YAGGSPTLNAGGTGYSQEPRYTAPPTGSYLGPQGNPLTTPDIAATPAVPAGFDSEAFLRNAKVYFVRLQAAWDAGNMDDI REFTTPEMFAEVRVDLSSRGAEKNQTDVVKLDADLLGVEDRGSEYLASVRFHGLIRETVGGSAEPFEEIWNLSKRTGEGW LLAGIQQANLH
Sequences:
>Translated_331_residues MSDSNMSSRCKVKGSWARRIGLIAMVGLISVGTLASLDAEAKRMGGGRTMGRQSNITQPQQQTSPSPSQSPGAPSQAMQQ QRPATPAPTPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGEAFAGMMANMIVIALIAFVAIWLIRKFVGRKRNAQTPA YAGGSPTLNAGGTGYSQEPRYTAPPTGSYLGPQGNPLTTPDIAATPAVPAGFDSEAFLRNAKVYFVRLQAAWDAGNMDDI REFTTPEMFAEVRVDLSSRGAEKNQTDVVKLDADLLGVEDRGSEYLASVRFHGLIRETVGGSAEPFEEIWNLSKRTGEGW LLAGIQQANLH >Mature_330_residues SDSNMSSRCKVKGSWARRIGLIAMVGLISVGTLASLDAEAKRMGGGRTMGRQSNITQPQQQTSPSPSQSPGAPSQAMQQQ RPATPAPTPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGEAFAGMMANMIVIALIAFVAIWLIRKFVGRKRNAQTPAY AGGSPTLNAGGTGYSQEPRYTAPPTGSYLGPQGNPLTTPDIAATPAVPAGFDSEAFLRNAKVYFVRLQAAWDAGNMDDIR EFTTPEMFAEVRVDLSSRGAEKNQTDVVKLDADLLGVEDRGSEYLASVRFHGLIRETVGGSAEPFEEIWNLSKRTGEGWL LAGIQQANLH
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35168; Mature: 35037
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSNMSSRCKVKGSWARRIGLIAMVGLISVGTLASLDAEAKRMGGGRTMGRQSNITQPQ CCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH QQTSPSPSQSPGAPSQAMQQQRPATPAPTPAAQPNRSRWLGPIAGLAAGLGIAALLSHFG HHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC LGEAFAGMMANMIVIALIAFVAIWLIRKFVGRKRNAQTPAYAGGSPTLNAGGTGYSQEPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YTAPPTGSYLGPQGNPLTTPDIAATPAVPAGFDSEAFLRNAKVYFVRLQAAWDAGNMDDI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEEECCCCCCHHHH REFTTPEMFAEVRVDLSSRGAEKNQTDVVKLDADLLGVEDRGSEYLASVRFHGLIRETVG HHHCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHCC GSAEPFEEIWNLSKRTGEGWLLAGIQQANLH CCCCHHHHHHHHHHCCCCCEEEECCHHCCCC >Mature Secondary Structure SDSNMSSRCKVKGSWARRIGLIAMVGLISVGTLASLDAEAKRMGGGRTMGRQSNITQPQ CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH QQTSPSPSQSPGAPSQAMQQQRPATPAPTPAAQPNRSRWLGPIAGLAAGLGIAALLSHFG HHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC LGEAFAGMMANMIVIALIAFVAIWLIRKFVGRKRNAQTPAYAGGSPTLNAGGTGYSQEPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YTAPPTGSYLGPQGNPLTTPDIAATPAVPAGFDSEAFLRNAKVYFVRLQAAWDAGNMDDI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEEEECCCCCCHHHH REFTTPEMFAEVRVDLSSRGAEKNQTDVVKLDADLLGVEDRGSEYLASVRFHGLIRETVG HHHCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHCC GSAEPFEEIWNLSKRTGEGWLLAGIQQANLH CCCCHHHHHHHHHHCCCCCEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA