| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is aqpZ [H]
Identifier: 186475126
GI number: 186475126
Start: 401854
End: 402597
Strand: Direct
Name: aqpZ [H]
Synonym: Bphy_0357
Alternate gene names: 186475126
Gene position: 401854-402597 (Clockwise)
Preceding gene: 186475125
Following gene: 186475127
Centisome position: 11.55
GC content: 65.32
Gene sequence:
>744_bases ATGTCAGGGCTGGGAAAGCGATTGATCGTGGAAGGCGCCGGGACGGCGTGGCTCGTGTTCATTGGGTGTGGCACAGCTGC GCTTAACACGGGCGCGCAAGGCAATAGCATCATCGCCGTGCCGCTCGCCTTCGGCTTTGCGTTGGCTACCGCGACTTACG TGCTTGGGCGCTTTTCGGGGGCGCACTTCAATCCCGCCGTCACCGTCGCTTTTGTGACAGCGCAACGCTTTTCCGTGCGC GACCTCGCACCCTATATCGCCGCGCAAGTGCTCGGCGCCGTCGCGGGCGCTGCGCTGCTTGTCTATATCGCCAGCGGCCG TCCGGGCTTCGAGCTTGCATCGAGCCAGTTCGGCGCGACGGGGTTTGGCGACCATTCTCCCGCCGACTACTCACTGCATT CCGCGCTGGCGGTCGAAGTCACCCTGTCCTTTGCATTCGTACTGGCGCGCATGCTGATGTCGAGCGGCCGCTCGGCGAAC CTGATCGGTCCGCTCGTCACGGGTTTGTGGCTGATGCTGAGCTACGTCGTCGCGGCACCCGTCACTAATGCTTCACTGAA TCCCGCCCGCTCGACGGGCCCGGCACTGCTCGTCGGCGACTGGGCGCTCGACCAGTTGTGGCTTTTTTGGGCGGCTCCGC TCACGGGAGGTGTGCTCGCCGGCTTGCTGCATTCGCGAGTTTTTGGCCAGCCACGGGATATGTTCGCGGGGCGCCGCGAG GGCCGTCGCGGCGAGTCGGCGTGA
Upstream 100 bases:
>100_bases GCCACGTCATTGATTCGCGATGCGAATCAATTGTGACCAGGCGCAACCCTGGAGATCCGTCGCAAAAGATCGTCTGAGCG GGGTAATTTCCGGAGGATGC
Downstream 100 bases:
>100_bases GCGCCATCATGCATTGCTTACGCGTCCGGATGCCGTTTCGCGCCCATTCGCTATGTCACACCTCCCGGGTTCTCGTTCGC GAGGCCTTGATAGCCGGTTT
Product: major intrinsic protein
Products: H2O [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSGLGKRLIVEGAGTAWLVFIGCGTAALNTGAQGNSIIAVPLAFGFALATATYVLGRFSGAHFNPAVTVAFVTAQRFSVR DLAPYIAAQVLGAVAGAALLVYIASGRPGFELASSQFGATGFGDHSPADYSLHSALAVEVTLSFAFVLARMLMSSGRSAN LIGPLVTGLWLMLSYVVAAPVTNASLNPARSTGPALLVGDWALDQLWLFWAAPLTGGVLAGLLHSRVFGQPRDMFAGRRE GRRGESA
Sequences:
>Translated_247_residues MSGLGKRLIVEGAGTAWLVFIGCGTAALNTGAQGNSIIAVPLAFGFALATATYVLGRFSGAHFNPAVTVAFVTAQRFSVR DLAPYIAAQVLGAVAGAALLVYIASGRPGFELASSQFGATGFGDHSPADYSLHSALAVEVTLSFAFVLARMLMSSGRSAN LIGPLVTGLWLMLSYVVAAPVTNASLNPARSTGPALLVGDWALDQLWLFWAAPLTGGVLAGLLHSRVFGQPRDMFAGRRE GRRGESA >Mature_246_residues SGLGKRLIVEGAGTAWLVFIGCGTAALNTGAQGNSIIAVPLAFGFALATATYVLGRFSGAHFNPAVTVAFVTAQRFSVRD LAPYIAAQVLGAVAGAALLVYIASGRPGFELASSQFGATGFGDHSPADYSLHSALAVEVTLSFAFVLARMLMSSGRSANL IGPLVTGLWLMLSYVVAAPVTNASLNPARSTGPALLVGDWALDQLWLFWAAPLTGGVLAGLLHSRVFGQPRDMFAGRREG RRGESA
Specific function: Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response
COG id: COG0580
COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP/aquaporin (TC 1.A.8) family [H]
Homologues:
Organism=Homo sapiens, GI4502181, Length=195, Percent_Identity=33.3333333333333, Blast_Score=104, Evalue=6e-23, Organism=Homo sapiens, GI4755125, Length=195, Percent_Identity=33.3333333333333, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI4502179, Length=258, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI6912506, Length=222, Percent_Identity=35.1351351351351, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI37694062, Length=238, Percent_Identity=31.5126050420168, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI4502183, Length=222, Percent_Identity=32.8828828828829, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI86792455, Length=235, Percent_Identity=30.2127659574468, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI45446752, Length=206, Percent_Identity=27.6699029126214, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI157266307, Length=276, Percent_Identity=28.6231884057971, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1787101, Length=207, Percent_Identity=44.9275362318841, Blast_Score=170, Evalue=9e-44, Organism=Escherichia coli, GI1790362, Length=210, Percent_Identity=29.5238095238095, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71993722, Length=241, Percent_Identity=28.2157676348548, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17558372, Length=206, Percent_Identity=29.6116504854369, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24652747, Length=227, Percent_Identity=33.920704845815, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI45551084, Length=227, Percent_Identity=33.920704845815, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI17136672, Length=240, Percent_Identity=33.75, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24652751, Length=257, Percent_Identity=29.5719844357977, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI19922038, Length=227, Percent_Identity=30.8370044052863, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24762344, Length=244, Percent_Identity=29.9180327868852, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24762346, Length=244, Percent_Identity=29.9180327868852, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24762348, Length=244, Percent_Identity=29.9180327868852, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI20130305, Length=244, Percent_Identity=29.9180327868852, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI45550503, Length=248, Percent_Identity=27.8225806451613, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24762342, Length=231, Percent_Identity=29.004329004329, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012269 - InterPro: IPR000425 - InterPro: IPR022357 [H]
Pfam domain/function: PF00230 MIP [H]
EC number: NA
Molecular weight: Translated: 25543; Mature: 25412
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00221 MIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLGKRLIVEGAGTAWLVFIGCGTAALNTGAQGNSIIAVPLAFGFALATATYVLGRFSG CCCCCCEEEEECCCCEEEEEEECCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCC AHFNPAVTVAFVTAQRFSVRDLAPYIAAQVLGAVAGAALLVYIASGRPGFELASSQFGAT CCCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCC GFGDHSPADYSLHSALAVEVTLSFAFVLARMLMSSGRSANLIGPLVTGLWLMLSYVVAAP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC VTNASLNPARSTGPALLVGDWALDQLWLFWAAPLTGGVLAGLLHSRVFGQPRDMFAGRRE CCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC GRRGESA CCCCCCC >Mature Secondary Structure SGLGKRLIVEGAGTAWLVFIGCGTAALNTGAQGNSIIAVPLAFGFALATATYVLGRFSG CCCCCEEEEECCCCEEEEEEECCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCC AHFNPAVTVAFVTAQRFSVRDLAPYIAAQVLGAVAGAALLVYIASGRPGFELASSQFGAT CCCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCC GFGDHSPADYSLHSALAVEVTLSFAFVLARMLMSSGRSANLIGPLVTGLWLMLSYVVAAP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC VTNASLNPARSTGPALLVGDWALDQLWLFWAAPLTGGVLAGLLHSRVFGQPRDMFAGRRE CCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC GRRGESA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O [Periplasm] [C]
Specific reaction: H2O [Periplasm] = H2O [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]