| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186474902
Identifier: 186474902
GI number: 186474902
Start: 139660
End: 140808
Strand: Direct
Name: 186474902
Synonym: Bphy_0132
Alternate gene names: NA
Gene position: 139660-140808 (Clockwise)
Preceding gene: 186474901
Following gene: 186474903
Centisome position: 4.01
GC content: 68.23
Gene sequence:
>1149_bases ATGGAAACTTCGCTGAGCGGTCTGCGCGCCATGCATGCGTCGTTCGAAATCGCCGACGCCAGCAGCGTCGCGTTTGCACG GCGCAGTGCGAACGACGCCGGGCAGAAAGGCGCGTTAAACGACACGGACCTGGGCCGGGTCGCGTTGATCGTCACGGAAG CCGCGACCAACATCCTCAAGCATGCGCAGCACGGCGAACTGCTCGTGCGCGTGTTGCCTTCGGGTGCGGCGGGCACACGC GCGGACGGTGTCGAGATCATCGCGATCGACAAGGGTCCCGGCATGCGGGACGTGGGGCTCGCGTTTCGCGACGGCAGCAC GACTGCAGGCACGCCGGGCACTGGGCTGGGCGCGATCCGCCGGCTGTCGGAAGACGTGTCGGTGTATTCCCAACCGGGGC TTGGCACTGTGCTGCGCGCGGTCGTGCGCAGCCGCAGTCCCAGCGATCACGCCCCAGCGCGCGCGATGCGAGCGGCGGCG GGTACCGACATCGGCGGCGTGTGCGTGCCTTATCCGGGCGAATCAGTATGCGGTGACGCGTGGGGCATCGAATCGGATCA GCACGGCCTGACCGTCACCGTCGCCGATGGATTGGGCCACGGTCCCGACGCGCACGTCGCGGCGGCGGGCGCGGTCGATG TCGTGCGGCGGCGCGCAGGCCGCTCGCCTGCAGCGCTGATGGAGCTCGCACACGGCGCGTTGCGTCCGACGCGCGGCGCC GCTGTCGCGATCGCGCGACTCGATCTGGCGCGTTCGCAACTCGAATTCGCGGGCACGGGCAACATATCGGCGTCGATCTT CAACGTCGGCAGGCCGGTCCTCGTCGGCGGCGGTTCGACGCGCAGTGCGAGTGCGACATCGGAGGGAACGCGCAACAGCT GGCAACTCACGTCGCGCAACGGCATCGTCGGCCATACCATGCGCGATTCGCAGGAGTTTGCCGTGCCGTGGACGCGCGAC GCACTGCTCATCCTGCATTCGGACGGTATCGGTACGCGCTGGGATCTGGCCGCCTATCCGGGGCTGCATCTGCAGCCGGC CGTGATGATTGCGGCGGTGCTGTACCGCGACTTTTCGCGGCGACGAGACGACGCGACCGTGGTCGTCGTCAAGGCGGATC AGCAGCAATCGGTTAAGGGATCGGAGTAG
Upstream 100 bases:
>100_bases GCTCCGGCCTCGGCCTTGGGCTCGGCGGCGCGCGGCGTCTGTGCGACGAATTCGAAATCCAGTCGGAACCAGGAAAAGGC ACGAGAGTGTCAATCACCAA
Downstream 100 bases:
>100_bases GGCGCCAACTCCCACCGACAGCTTTGCATGGGGCGGGAGCAAGGCGCTAAAGCGCCAACTCCCACCGACAGGAGTAAATT TCACGCATGACGACCCCTAT
Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
Products: NA
Alternate protein names: Two-Component System Regulatory Protein; Anti-Sigma Regulatory Factor; Stage II Sporulation E Family Protein; RS Protein; RS-Related Protein; Anti-Sigma-Regulatory Factor; LigA Protein; Stage II Sporulation Protein E; Two-Component System Sensor Histidine Kinase; ATPase Histidine Kinase- DNA Gyrase B- And
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues METSLSGLRAMHASFEIADASSVAFARRSANDAGQKGALNDTDLGRVALIVTEAATNILKHAQHGELLVRVLPSGAAGTR ADGVEIIAIDKGPGMRDVGLAFRDGSTTAGTPGTGLGAIRRLSEDVSVYSQPGLGTVLRAVVRSRSPSDHAPARAMRAAA GTDIGGVCVPYPGESVCGDAWGIESDQHGLTVTVADGLGHGPDAHVAAAGAVDVVRRRAGRSPAALMELAHGALRPTRGA AVAIARLDLARSQLEFAGTGNISASIFNVGRPVLVGGGSTRSASATSEGTRNSWQLTSRNGIVGHTMRDSQEFAVPWTRD ALLILHSDGIGTRWDLAAYPGLHLQPAVMIAAVLYRDFSRRRDDATVVVVKADQQQSVKGSE
Sequences:
>Translated_382_residues METSLSGLRAMHASFEIADASSVAFARRSANDAGQKGALNDTDLGRVALIVTEAATNILKHAQHGELLVRVLPSGAAGTR ADGVEIIAIDKGPGMRDVGLAFRDGSTTAGTPGTGLGAIRRLSEDVSVYSQPGLGTVLRAVVRSRSPSDHAPARAMRAAA GTDIGGVCVPYPGESVCGDAWGIESDQHGLTVTVADGLGHGPDAHVAAAGAVDVVRRRAGRSPAALMELAHGALRPTRGA AVAIARLDLARSQLEFAGTGNISASIFNVGRPVLVGGGSTRSASATSEGTRNSWQLTSRNGIVGHTMRDSQEFAVPWTRD ALLILHSDGIGTRWDLAAYPGLHLQPAVMIAAVLYRDFSRRRDDATVVVVKADQQQSVKGSE >Mature_382_residues METSLSGLRAMHASFEIADASSVAFARRSANDAGQKGALNDTDLGRVALIVTEAATNILKHAQHGELLVRVLPSGAAGTR ADGVEIIAIDKGPGMRDVGLAFRDGSTTAGTPGTGLGAIRRLSEDVSVYSQPGLGTVLRAVVRSRSPSDHAPARAMRAAA GTDIGGVCVPYPGESVCGDAWGIESDQHGLTVTVADGLGHGPDAHVAAAGAVDVVRRRAGRSPAALMELAHGALRPTRGA AVAIARLDLARSQLEFAGTGNISASIFNVGRPVLVGGGSTRSASATSEGTRNSWQLTSRNGIVGHTMRDSQEFAVPWTRD ALLILHSDGIGTRWDLAAYPGLHLQPAVMIAAVLYRDFSRRRDDATVVVVKADQQQSVKGSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39584; Mature: 39584
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSLSGLRAMHASFEIADASSVAFARRSANDAGQKGALNDTDLGRVALIVTEAATNILK CCCCHHHHHHHHHCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHH HAQHGELLVRVLPSGAAGTRADGVEIIAIDKGPGMRDVGLAFRDGSTTAGTPGTGLGAIR HCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHH RLSEDVSVYSQPGLGTVLRAVVRSRSPSDHAPARAMRAAAGTDIGGVCVPYPGESVCGDA HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCC WGIESDQHGLTVTVADGLGHGPDAHVAAAGAVDVVRRRAGRSPAALMELAHGALRPTRGA CCCCCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC AVAIARLDLARSQLEFAGTGNISASIFNVGRPVLVGGGSTRSASATSEGTRNSWQLTSRN EEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEECCC GIVGHTMRDSQEFAVPWTRDALLILHSDGIGTRWDLAAYPGLHLQPAVMIAAVLYRDFSR CEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHC RRDDATVVVVKADQQQSVKGSE CCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure METSLSGLRAMHASFEIADASSVAFARRSANDAGQKGALNDTDLGRVALIVTEAATNILK CCCCHHHHHHHHHCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHH HAQHGELLVRVLPSGAAGTRADGVEIIAIDKGPGMRDVGLAFRDGSTTAGTPGTGLGAIR HCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHH RLSEDVSVYSQPGLGTVLRAVVRSRSPSDHAPARAMRAAAGTDIGGVCVPYPGESVCGDA HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCC WGIESDQHGLTVTVADGLGHGPDAHVAAAGAVDVVRRRAGRSPAALMELAHGALRPTRGA CCCCCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC AVAIARLDLARSQLEFAGTGNISASIFNVGRPVLVGGGSTRSASATSEGTRNSWQLTSRN EEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEECCC GIVGHTMRDSQEFAVPWTRDALLILHSDGIGTRWDLAAYPGLHLQPAVMIAAVLYRDFSR CEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHC RRDDATVVVVKADQQQSVKGSE CCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA