| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is pckG
Identifier: 186474801
GI number: 186474801
Start: 33920
End: 35776
Strand: Direct
Name: pckG
Synonym: Bphy_0030
Alternate gene names: 186474801
Gene position: 33920-35776 (Clockwise)
Preceding gene: 186474799
Following gene: 186474802
Centisome position: 0.97
GC content: 64.35
Gene sequence:
>1857_bases ATGAATCATCCCGCATTTGCAGCCCATTCAACCCTTGAAGCGCCTGCCTGGGTCAAACACAAAAAGCTGATCGAGTGGGT GCAGCGCGTTGCGGCGCTGGCGAAGCCGGAGCGGATCGTCTGGTGCGACGGTTCGCAGGAGGAATATGACCGCCTGACGG CGCAGATGGTCGCGGCCGGCACCCTCAGAAGGCTCAACCCGGCCAAACGGCCGAACTCGTATCTCGCCTGTTCCGATCCG TCCGACGTCGCGCGCGTCGAGGACCGTACGTTCATCTGTTCGCAGCGTCGTGAAGACGCTGGCCCGACCAACAACTGGAT CGCGCCCGCCGAGATGCGCGCAACGCTCGACGGTCTGTTCGACGGCGCGATGCGCGGCCGTACGATGTACGTCGTGCCAT TCTCGATGGGGCCGCTCGGCTCGCCGATCGCCCATATAGGCGTCGAGCTGAGCGATAGCCCATACGTCGTCAGCAACATG CGGATCATGACGCGCATGGGCCGCAAGGTGTACGACGTACTCGGCGAGGACGGCGAGTTCGTGCCGTGCGTGCATTCCGT CGGCGCGCCGCTCGCGGCAGGCCAGAAGGACGTGGCCTGGCCGTGTAACGACACGAAATACATCGTCCACTTCCCGGAAT CGCGTGAAATCTGGAGCTATGGCTCGGGCTACGGCGGCAATGCGCTGCTCGGCAAGAAGTGCTTCGCGCTGCGTATCGCG TCCACGATGGGCCGCGCCGAAGGCTGGCTCGCCGAACACATGCTGGTGCTCGGCGTGACCTCGCCCGAAGGCAAGAAGCA CCATGTGGCGGCGGCTTTCCCGTCGGCCTGCGGCAAGACCAATTTCGCGATGCTGATTCCGCCGCAAGGCATGAACGGCT GGAAGATCACGACGATCGGCGACGACATCGCCTGGATCAAGCCAGGCAAGGACGGGCGTCTTTACGCGATCAACCCGGAA GCGGGCTATTTCGGCGTCGCGCCGGGCACGAGCGAAAAGACCAACTTCAACGCGATGGCCACGCTGAAGGAAAACGTGAT CTTCACGAACGTCGCGCTTACGGACGACGGCGACGTCTGGTGGGAGGGCATGACGGACGAGCCGCCCGCGCATCTGATCG ACTGGCAGGGCAGGGACTGGACGCCCGCCATCGCGAAAGAAACGGGCCGCAAGGCGGCGCATCCGAACGCCCGCTTCACG GCGCCCGCTTCGCAATGCCCGTCGATCGACGCCGACTGGGAAAACCCAGCAGGCGTGCCGATCGACGCGTTCGTGTTCGG CGGCCGTCGTTCGACGACCGTGCCGCTCGTGACGGAAGCGCGCGACTGGGTCGAAGGCGTCTACATGGCCGCGACGATGG GCTCGGAAACGACGGCGGCGGCGGCCGGACAGCAGGGCGTCGTGCGGCGCGATCCGTTCGCGATGCTGCCGTTCTGCGGC TACAACATGAGCGACTACTTTGCCCACTGGCTGAAGACGGGCGTGAAACTGGAGCAGATGAGCGTGCGCACGCCCAAGAT TTTCTGCGTCAACTGGTTCCGCAAGGGCGACGACGGCAAGTTCGTGTGGCCTGGCTTCGGCGAAAACATGCGCGTGCTGC GCTGGATGGTCGATCGGATCGAGGGTAAGGCGAAGGGAGAGGAGCATGCGTTCGGCGTGTCCCCGCGCTATGACGACCTC GACTGGAGCGGGCTGGACTTCACGCGCGAGCAATTCGAACAGGTGATTTCGGTCGATGATGCCGCCTGGCGCAAGGAACT CGCGTTGCACAGCGAGTTGTTCGACACGCTGAAGCAGGGCCTGCCTGTCGCACTGCAAGACACCCGCAGCGCGCTCGAAA AGAAGCTCACCGCGTGA
Upstream 100 bases:
>100_bases TCGCGCGTCCGGGAACGGTTCGCGCAGAGTGTCGCCTCTCGCACGCAGCGTCGCTGGGCCAGCACCGTTTTCATACTTCT ACCAAAACGGAGACAGCTCG
Downstream 100 bases:
>100_bases CATTGTGAGCGCTCACTAACGCCCATATGAGCCGCCCTCGGGCGGCTTTCTTGAGCGCGTCCGACCGGTTTCGCTCGCAT TCCGCCCCATTTCCCCGCCG
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MNHPAFAAHSTLEAPAWVKHKKLIEWVQRVAALAKPERIVWCDGSQEEYDRLTAQMVAAGTLRRLNPAKRPNSYLACSDP SDVARVEDRTFICSQRREDAGPTNNWIAPAEMRATLDGLFDGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVSNM RIMTRMGRKVYDVLGEDGEFVPCVHSVGAPLAAGQKDVAWPCNDTKYIVHFPESREIWSYGSGYGGNALLGKKCFALRIA STMGRAEGWLAEHMLVLGVTSPEGKKHHVAAAFPSACGKTNFAMLIPPQGMNGWKITTIGDDIAWIKPGKDGRLYAINPE AGYFGVAPGTSEKTNFNAMATLKENVIFTNVALTDDGDVWWEGMTDEPPAHLIDWQGRDWTPAIAKETGRKAAHPNARFT APASQCPSIDADWENPAGVPIDAFVFGGRRSTTVPLVTEARDWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCG YNMSDYFAHWLKTGVKLEQMSVRTPKIFCVNWFRKGDDGKFVWPGFGENMRVLRWMVDRIEGKAKGEEHAFGVSPRYDDL DWSGLDFTREQFEQVISVDDAAWRKELALHSELFDTLKQGLPVALQDTRSALEKKLTA
Sequences:
>Translated_618_residues MNHPAFAAHSTLEAPAWVKHKKLIEWVQRVAALAKPERIVWCDGSQEEYDRLTAQMVAAGTLRRLNPAKRPNSYLACSDP SDVARVEDRTFICSQRREDAGPTNNWIAPAEMRATLDGLFDGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVSNM RIMTRMGRKVYDVLGEDGEFVPCVHSVGAPLAAGQKDVAWPCNDTKYIVHFPESREIWSYGSGYGGNALLGKKCFALRIA STMGRAEGWLAEHMLVLGVTSPEGKKHHVAAAFPSACGKTNFAMLIPPQGMNGWKITTIGDDIAWIKPGKDGRLYAINPE AGYFGVAPGTSEKTNFNAMATLKENVIFTNVALTDDGDVWWEGMTDEPPAHLIDWQGRDWTPAIAKETGRKAAHPNARFT APASQCPSIDADWENPAGVPIDAFVFGGRRSTTVPLVTEARDWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCG YNMSDYFAHWLKTGVKLEQMSVRTPKIFCVNWFRKGDDGKFVWPGFGENMRVLRWMVDRIEGKAKGEEHAFGVSPRYDDL DWSGLDFTREQFEQVISVDDAAWRKELALHSELFDTLKQGLPVALQDTRSALEKKLTA >Mature_618_residues MNHPAFAAHSTLEAPAWVKHKKLIEWVQRVAALAKPERIVWCDGSQEEYDRLTAQMVAAGTLRRLNPAKRPNSYLACSDP SDVARVEDRTFICSQRREDAGPTNNWIAPAEMRATLDGLFDGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVSNM RIMTRMGRKVYDVLGEDGEFVPCVHSVGAPLAAGQKDVAWPCNDTKYIVHFPESREIWSYGSGYGGNALLGKKCFALRIA STMGRAEGWLAEHMLVLGVTSPEGKKHHVAAAFPSACGKTNFAMLIPPQGMNGWKITTIGDDIAWIKPGKDGRLYAINPE AGYFGVAPGTSEKTNFNAMATLKENVIFTNVALTDDGDVWWEGMTDEPPAHLIDWQGRDWTPAIAKETGRKAAHPNARFT APASQCPSIDADWENPAGVPIDAFVFGGRRSTTVPLVTEARDWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCG YNMSDYFAHWLKTGVKLEQMSVRTPKIFCVNWFRKGDDGKFVWPGFGENMRVLRWMVDRIEGKAKGEEHAFGVSPRYDDL DWSGLDFTREQFEQVISVDDAAWRKELALHSELFDTLKQGLPVALQDTRSALEKKLTA
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family
Homologues:
Organism=Homo sapiens, GI187281517, Length=607, Percent_Identity=50.9060955518946, Blast_Score=603, Evalue=1e-172, Organism=Homo sapiens, GI66346721, Length=607, Percent_Identity=50.0823723228995, Blast_Score=572, Evalue=1e-163, Organism=Homo sapiens, GI66346723, Length=378, Percent_Identity=53.1746031746032, Blast_Score=389, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17555492, Length=623, Percent_Identity=49.2776886035313, Blast_Score=561, Evalue=1e-160, Organism=Caenorhabditis elegans, GI71989645, Length=611, Percent_Identity=47.1358428805237, Blast_Score=550, Evalue=1e-157, Organism=Caenorhabditis elegans, GI71989658, Length=611, Percent_Identity=47.1358428805237, Blast_Score=549, Evalue=1e-156, Organism=Caenorhabditis elegans, GI32564411, Length=565, Percent_Identity=52.5663716814159, Blast_Score=546, Evalue=1e-156, Organism=Caenorhabditis elegans, GI71989653, Length=598, Percent_Identity=47.6588628762542, Blast_Score=545, Evalue=1e-155, Organism=Caenorhabditis elegans, GI32564407, Length=531, Percent_Identity=51.9774011299435, Blast_Score=515, Evalue=1e-146, Organism=Caenorhabditis elegans, GI71989649, Length=536, Percent_Identity=48.3208955223881, Blast_Score=491, Evalue=1e-139, Organism=Caenorhabditis elegans, GI32564409, Length=377, Percent_Identity=49.0716180371353, Blast_Score=330, Evalue=1e-90, Organism=Caenorhabditis elegans, GI17540956, Length=523, Percent_Identity=26.1950286806883, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24655085, Length=604, Percent_Identity=49.5033112582781, Blast_Score=579, Evalue=1e-165, Organism=Drosophila melanogaster, GI24655082, Length=606, Percent_Identity=49.1749174917492, Blast_Score=570, Evalue=1e-163, Organism=Drosophila melanogaster, GI161077226, Length=575, Percent_Identity=50.0869565217391, Blast_Score=547, Evalue=1e-155, Organism=Drosophila melanogaster, GI24655088, Length=509, Percent_Identity=51.0805500982318, Blast_Score=509, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PCKG_BURP8 (B2JJT8)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001856271.1 - ProteinModelPortal: B2JJT8 - SMR: B2JJT8 - GeneID: 6241534 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_0030 - HOGENOM: HBG484437 - OMA: CGYHMGD - ProtClustDB: PRK04210 - GO: GO:0005737 - GO: GO:0006094 - HAMAP: MF_00452 - InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 - Gene3D: G3DSA:3.90.228.20 - Gene3D: G3DSA:3.40.449.10 - PANTHER: PTHR11561 - PIRSF: PIRSF001348
Pfam domain/function: PF00821 PEPCK; SSF68923 PEP_carboxykinase_N
EC number: =4.1.1.32
Molecular weight: Translated: 68288; Mature: 68288
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00505 PEPCK_GTP
Important sites: ACT_SITE 277-277 BINDING 85-85 BINDING 226-226 BINDING 233-233 BINDING 275-275 BINDING 398-398 BINDING 429-429
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHPAFAAHSTLEAPAWVKHKKLIEWVQRVAALAKPERIVWCDGSQEEYDRLTAQMVAAG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHH TLRRLNPAKRPNSYLACSDPSDVARVEDRTFICSQRREDAGPTNNWIAPAEMRATLDGLF HHHHCCCCCCCCCEEEECCCHHHHHHCCCEEEHHCCCCCCCCCCCCCCHHHHHHHHHHHH DGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVSNMRIMTRMGRKVYDVLGEDGEF HHHHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCE VPCVHSVGAPLAAGQKDVAWPCNDTKYIVHFPESREIWSYGSGYGGNALLGKKCFALRIA EHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCHHCCHHHHHHHH STMGRAEGWLAEHMLVLGVTSPEGKKHHVAAAFPSACGKTNFAMLIPPQGMNGWKITTIG HHHCHHHHHHHHCEEEEEECCCCCCCEEEEEECCHHCCCCCEEEEECCCCCCCEEEEEEC DDIAWIKPGKDGRLYAINPEAGYFGVAPGTSEKTNFNAMATLKENVIFTNVALTDDGDVW CCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCEE WEGMTDEPPAHLIDWQGRDWTPAIAKETGRKAAHPNARFTAPASQCPSIDADWENPAGVP ECCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCC IDAFVFGGRRSTTVPLVTEARDWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCG EEEEEECCCCCCEEEEEHHHHHHHHHEEEEEECCCCCHHHHCCCCCCEECCCCEECCCCC YNMSDYFAHWLKTGVKLEQMSVRTPKIFCVNWFRKGDDGKFVWPGFGENMRVLRWMVDRI CCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHH EGKAKGEEHAFGVSPRYDDLDWSGLDFTREQFEQVISVDDAAWRKELALHSELFDTLKQG CCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC LPVALQDTRSALEKKLTA CCEEEHHHHHHHHHHCCC >Mature Secondary Structure MNHPAFAAHSTLEAPAWVKHKKLIEWVQRVAALAKPERIVWCDGSQEEYDRLTAQMVAAG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHH TLRRLNPAKRPNSYLACSDPSDVARVEDRTFICSQRREDAGPTNNWIAPAEMRATLDGLF HHHHCCCCCCCCCEEEECCCHHHHHHCCCEEEHHCCCCCCCCCCCCCCHHHHHHHHHHHH DGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVSNMRIMTRMGRKVYDVLGEDGEF HHHHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCE VPCVHSVGAPLAAGQKDVAWPCNDTKYIVHFPESREIWSYGSGYGGNALLGKKCFALRIA EHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCHHCCHHHHHHHH STMGRAEGWLAEHMLVLGVTSPEGKKHHVAAAFPSACGKTNFAMLIPPQGMNGWKITTIG HHHCHHHHHHHHCEEEEEECCCCCCCEEEEEECCHHCCCCCEEEEECCCCCCCEEEEEEC DDIAWIKPGKDGRLYAINPEAGYFGVAPGTSEKTNFNAMATLKENVIFTNVALTDDGDVW CCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCEE WEGMTDEPPAHLIDWQGRDWTPAIAKETGRKAAHPNARFTAPASQCPSIDADWENPAGVP ECCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCC IDAFVFGGRRSTTVPLVTEARDWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCG EEEEEECCCCCCEEEEEHHHHHHHHHEEEEEECCCCCHHHHCCCCCCEECCCCEECCCCC YNMSDYFAHWLKTGVKLEQMSVRTPKIFCVNWFRKGDDGKFVWPGFGENMRVLRWMVDRI CCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHH EGKAKGEEHAFGVSPRYDDLDWSGLDFTREQFEQVISVDDAAWRKELALHSELFDTLKQG CCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC LPVALQDTRSALEKKLTA CCEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA