Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186474795

Identifier: 186474795

GI number: 186474795

Start: 28054

End: 28971

Strand: Direct

Name: 186474795

Synonym: Bphy_0024

Alternate gene names: NA

Gene position: 28054-28971 (Clockwise)

Preceding gene: 186474794

Following gene: 186474796

Centisome position: 0.81

GC content: 44.34

Gene sequence:

>918_bases
ATGTGCGATTTTTCGAGTAGCGAGTTTGAGTCGGTAGTTATCACAAGCCCATCCGGCCGAAAATTGTGTCGCGTTTCTCA
TCGAGATACAACCGTATCAAGCGACCAGGTTGCGAAAAAGGTGCTCATCTCCGATAAATCAGTGCGACTTCAAATAACGA
CCGAAAAGACAGGATTCACACTCCAAAAGGTTTACGGTCATCCAAATACATCAGGTAATTTCCAAAAATTTTGGGATTGG
CAGCCTGCAGTAGTTGTCCCGACATATCGGGCAAATTTAACAGTTTACGATCCCAAAAAAGAGGACCGTGTCGTTTCTCA
ACTTGATTTGACGAGAGATGCAACATATTACTTGGGGCGGGACTCAAGCGGCCGTGACTGGTGTAGAAATATTGCTTTCG
AGCCGCAGGACGCTAATAATAACGTGTATATAACGGACGAGGTGCATTTCCCCCCGCTTGCGGACCCAATCATTAAAGGT
TACATTTTAATGGAACTTGAAAAAAATAATAAGCCATCGCGCAGCCTTCACGCGGAGCCAGTAAGCATGAAAAATCCCTA
TGGGCCGGAATTAACTATTCGGCCACTTGGAAATATCGCTCACGATTGCTTGTTTCATATTGGCGGATTTTATGAGGCTA
GAATTTCAGCTGGCCATGCAAAATGGCTTGGAGGATCCGAAGGATGCTTCGCCTTCATTCCAAAAGAAAGTGTTTCGAAA
ACCGAAAATGACGCCGCAAAGGTTGCGGCAAATACAGAATTTTATTCGAATAAAAAATGGGTGAGTGTGACTGATTCAAT
TGATGCCCACAGAAAATTGGATTCAAAAAATCGGTTCTTTGTCGAGCTTGCCAAGCGCTCGTCATTTTCGCGCGATTCCT
GCGTGGAGATAATAAAAATCGCTCGCGCTTTTCCTTAA

Upstream 100 bases:

>100_bases
TGAGCAAGGGCATACGCATTTACTGAGCCAGACTGCCACGTCGGAATCGGTGGCAATTTACGCGTAACTATTGAATAGTT
GGATTTTCTAGGTAGAGAAA

Downstream 100 bases:

>100_bases
TGTTTTAAACTCAGTAAAGCTGCGTAATTTGATATGATTTCAGTAATTAAATTTTTGCGCATTGTCTTGTTTGTGTTGTT
GGTTTTCGGTCTGGCATATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MCDFSSSEFESVVITSPSGRKLCRVSHRDTTVSSDQVAKKVLISDKSVRLQITTEKTGFTLQKVYGHPNTSGNFQKFWDW
QPAVVVPTYRANLTVYDPKKEDRVVSQLDLTRDATYYLGRDSSGRDWCRNIAFEPQDANNNVYITDEVHFPPLADPIIKG
YILMELEKNNKPSRSLHAEPVSMKNPYGPELTIRPLGNIAHDCLFHIGGFYEARISAGHAKWLGGSEGCFAFIPKESVSK
TENDAAKVAANTEFYSNKKWVSVTDSIDAHRKLDSKNRFFVELAKRSSFSRDSCVEIIKIARAFP

Sequences:

>Translated_305_residues
MCDFSSSEFESVVITSPSGRKLCRVSHRDTTVSSDQVAKKVLISDKSVRLQITTEKTGFTLQKVYGHPNTSGNFQKFWDW
QPAVVVPTYRANLTVYDPKKEDRVVSQLDLTRDATYYLGRDSSGRDWCRNIAFEPQDANNNVYITDEVHFPPLADPIIKG
YILMELEKNNKPSRSLHAEPVSMKNPYGPELTIRPLGNIAHDCLFHIGGFYEARISAGHAKWLGGSEGCFAFIPKESVSK
TENDAAKVAANTEFYSNKKWVSVTDSIDAHRKLDSKNRFFVELAKRSSFSRDSCVEIIKIARAFP
>Mature_305_residues
MCDFSSSEFESVVITSPSGRKLCRVSHRDTTVSSDQVAKKVLISDKSVRLQITTEKTGFTLQKVYGHPNTSGNFQKFWDW
QPAVVVPTYRANLTVYDPKKEDRVVSQLDLTRDATYYLGRDSSGRDWCRNIAFEPQDANNNVYITDEVHFPPLADPIIKG
YILMELEKNNKPSRSLHAEPVSMKNPYGPELTIRPLGNIAHDCLFHIGGFYEARISAGHAKWLGGSEGCFAFIPKESVSK
TENDAAKVAANTEFYSNKKWVSVTDSIDAHRKLDSKNRFFVELAKRSSFSRDSCVEIIKIARAFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34384; Mature: 34384

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDFSSSEFESVVITSPSGRKLCRVSHRDTTVSSDQVAKKVLISDKSVRLQITTEKTGFT
CCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCE
LQKVYGHPNTSGNFQKFWDWQPAVVVPTYRANLTVYDPKKEDRVVSQLDLTRDATYYLGR
EEEEECCCCCCCCCCEECCCCCEEEEEEEECEEEEECCCCHHHHHHHHHCCCCCEEEECC
DSSGRDWCRNIAFEPQDANNNVYITDEVHFPPLADPIIKGYILMELEKNNKPSRSLHAEP
CCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCC
VSMKNPYGPELTIRPLGNIAHDCLFHIGGFYEARISAGHAKWLGGSEGCFAFIPKESVSK
CCCCCCCCCCEEEEECHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCEEEECCCHHHCC
TENDAAKVAANTEFYSNKKWVSVTDSIDAHRKLDSKNRFFVELAKRSSFSRDSCVEIIKI
CCCCHHEEEECCCEECCCCEEEEECCCHHHHHCCCCCCEEEEEEHHCCCCHHHHHHHHHH
ARAFP
HHCCC
>Mature Secondary Structure
MCDFSSSEFESVVITSPSGRKLCRVSHRDTTVSSDQVAKKVLISDKSVRLQITTEKTGFT
CCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCE
LQKVYGHPNTSGNFQKFWDWQPAVVVPTYRANLTVYDPKKEDRVVSQLDLTRDATYYLGR
EEEEECCCCCCCCCCEECCCCCEEEEEEEECEEEEECCCCHHHHHHHHHCCCCCEEEECC
DSSGRDWCRNIAFEPQDANNNVYITDEVHFPPLADPIIKGYILMELEKNNKPSRSLHAEP
CCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCC
VSMKNPYGPELTIRPLGNIAHDCLFHIGGFYEARISAGHAKWLGGSEGCFAFIPKESVSK
CCCCCCCCCCEEEEECHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCEEEECCCHHHCC
TENDAAKVAANTEFYSNKKWVSVTDSIDAHRKLDSKNRFFVELAKRSSFSRDSCVEIIKI
CCCCHHEEEECCCEECCCCEEEEECCCHHHHHCCCCCCEEEEEEHHCCCCHHHHHHHHHH
ARAFP
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA