| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186474796
Identifier: 186474796
GI number: 186474796
Start: 29288
End: 29647
Strand: Direct
Name: 186474796
Synonym: Bphy_0025
Alternate gene names: NA
Gene position: 29288-29647 (Clockwise)
Preceding gene: 186474795
Following gene: 186474797
Centisome position: 0.84
GC content: 60.28
Gene sequence:
>360_bases ATGACAGACTTTATTCGACTCGGTGACACCACCGACCACGGCGGCAAGGTCAACACCGAATCCGATCGCGCATGGGTGGT CCGAGCGAATGAACCAAAAGGAAAGAAAAGTATGGGCAAGGCACTCGTATGTAACGGCGATGAAACGACGACCGTCGGGC ATGTGATCGCGAAGGCATCCACGATGTTCGACGGCGAGCGGCGCATCGCCCTTGACCGGGGCGACCTGTCGCAAGTGTCC GGGCGAGCATCCGATTCAAGGTACGGGAACGGAGATGGACGAGGACGGGCGTGCGAGCGTACTCGACGGCGACCAGGTGC TGTGTCCATGCGGGGCCAATCACGTCAAGGCGAGTCCTGA
Upstream 100 bases:
>100_bases GTCTTGTTACTACTGTTTTTTTTCATAAAAAAATGGCTTATGAAAAGAAGGGCGGGTCAGTGAGGCTTGCAGATTTTATC TGACACTTAGAGATCAAGGA
Downstream 100 bases:
>100_bases CGCGGGATGTTCGACCTGAATGTCTGCCCCATTGACGCTGGACGATATGCAACGGCTGGCCGCTCGCCACGGTGGCCGGT GCATATCGACCGACTACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTDFIRLGDTTDHGGKVNTESDRAWVVRANEPKGKKSMGKALVCNGDETTTVGHVIAKASTMFDGERRIALDRGDLSQVS GRASDSRYGNGDGRGRACERTRRRPGAVSMRGQSRQGES
Sequences:
>Translated_119_residues MTDFIRLGDTTDHGGKVNTESDRAWVVRANEPKGKKSMGKALVCNGDETTTVGHVIAKASTMFDGERRIALDRGDLSQVS GRASDSRYGNGDGRGRACERTRRRPGAVSMRGQSRQGES >Mature_118_residues TDFIRLGDTTDHGGKVNTESDRAWVVRANEPKGKKSMGKALVCNGDETTTVGHVIAKASTMFDGERRIALDRGDLSQVSG RASDSRYGNGDGRGRACERTRRRPGAVSMRGQSRQGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12871; Mature: 12740
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFIRLGDTTDHGGKVNTESDRAWVVRANEPKGKKSMGKALVCNGDETTTVGHVIAKAS CCCEEECCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH TMFDGERRIALDRGDLSQVSGRASDSRYGNGDGRGRACERTRRRPGAVSMRGQSRQGES HCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCC >Mature Secondary Structure TDFIRLGDTTDHGGKVNTESDRAWVVRANEPKGKKSMGKALVCNGDETTTVGHVIAKAS CCEEECCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH TMFDGERRIALDRGDLSQVSGRASDSRYGNGDGRGRACERTRRRPGAVSMRGQSRQGES HCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA