Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186474796

Identifier: 186474796

GI number: 186474796

Start: 29288

End: 29647

Strand: Direct

Name: 186474796

Synonym: Bphy_0025

Alternate gene names: NA

Gene position: 29288-29647 (Clockwise)

Preceding gene: 186474795

Following gene: 186474797

Centisome position: 0.84

GC content: 60.28

Gene sequence:

>360_bases
ATGACAGACTTTATTCGACTCGGTGACACCACCGACCACGGCGGCAAGGTCAACACCGAATCCGATCGCGCATGGGTGGT
CCGAGCGAATGAACCAAAAGGAAAGAAAAGTATGGGCAAGGCACTCGTATGTAACGGCGATGAAACGACGACCGTCGGGC
ATGTGATCGCGAAGGCATCCACGATGTTCGACGGCGAGCGGCGCATCGCCCTTGACCGGGGCGACCTGTCGCAAGTGTCC
GGGCGAGCATCCGATTCAAGGTACGGGAACGGAGATGGACGAGGACGGGCGTGCGAGCGTACTCGACGGCGACCAGGTGC
TGTGTCCATGCGGGGCCAATCACGTCAAGGCGAGTCCTGA

Upstream 100 bases:

>100_bases
GTCTTGTTACTACTGTTTTTTTTCATAAAAAAATGGCTTATGAAAAGAAGGGCGGGTCAGTGAGGCTTGCAGATTTTATC
TGACACTTAGAGATCAAGGA

Downstream 100 bases:

>100_bases
CGCGGGATGTTCGACCTGAATGTCTGCCCCATTGACGCTGGACGATATGCAACGGCTGGCCGCTCGCCACGGTGGCCGGT
GCATATCGACCGACTACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MTDFIRLGDTTDHGGKVNTESDRAWVVRANEPKGKKSMGKALVCNGDETTTVGHVIAKASTMFDGERRIALDRGDLSQVS
GRASDSRYGNGDGRGRACERTRRRPGAVSMRGQSRQGES

Sequences:

>Translated_119_residues
MTDFIRLGDTTDHGGKVNTESDRAWVVRANEPKGKKSMGKALVCNGDETTTVGHVIAKASTMFDGERRIALDRGDLSQVS
GRASDSRYGNGDGRGRACERTRRRPGAVSMRGQSRQGES
>Mature_118_residues
TDFIRLGDTTDHGGKVNTESDRAWVVRANEPKGKKSMGKALVCNGDETTTVGHVIAKASTMFDGERRIALDRGDLSQVSG
RASDSRYGNGDGRGRACERTRRRPGAVSMRGQSRQGES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12871; Mature: 12740

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFIRLGDTTDHGGKVNTESDRAWVVRANEPKGKKSMGKALVCNGDETTTVGHVIAKAS
CCCEEECCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH
TMFDGERRIALDRGDLSQVSGRASDSRYGNGDGRGRACERTRRRPGAVSMRGQSRQGES
HCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCC
>Mature Secondary Structure 
TDFIRLGDTTDHGGKVNTESDRAWVVRANEPKGKKSMGKALVCNGDETTTVGHVIAKAS
CCEEECCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH
TMFDGERRIALDRGDLSQVSGRASDSRYGNGDGRGRACERTRRRPGAVSMRGQSRQGES
HCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA