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The map label for this gene is parB [H]

Identifier: 183222812

GI number: 183222812

Start: 3592012

End: 3592908

Strand: Reverse

Name: parB [H]

Synonym: LEPBI_I3473

Alternate gene names: 183222812

Gene position: 3592908-3592012 (Counterclockwise)

Preceding gene: 183222813

Following gene: 183222807

Centisome position: 99.81

GC content: 40.02

Gene sequence:

>897_bases
ATGGCACTCGGCAAAGGAAAAGTATTAGGACGAGGACTTGGAAATTTAATTCCAGTCAATGAAAACAATGTAGAGATTTC
GAAAGAGGAACTATCGGGACTACGCGAAATCAAAGTTTCCGAAATCTCACCAAATCCTCACCAACCAAGAAAACAATTTT
CAGATGTATCCATCCAAGAACTTTCCAATACCATTATCGAACATGGAGTGATCCAACCGATCGTAGTTCAAAAAAATCCA
TCTGGTTCAGGTTTCATCTTGGTTGCTGGAGAAAGGAGATTACGTGCATGCAAACTTGCTGGTTTTGCAAAAATTCCTGC
GATTGTTCGTGATCTATCGGAAGCGGATATGATGGAGCTTGCACTCATCGAAAATATCCAAAGGGAAAATTTAAATCCGA
TGGATGAAGCGTATGCCTACCAAGCCATCATCGACAAACGAGCGTTAAAGGTAACAGACCTTGCCACTCGTGTGGGAAAA
AACCGTGCAACCATTTCCAATTTGATTCGCCTCCTCTCTTTACCGAAACCTTTACAAGATTGGGTGAAAGAAGGGAAACT
TTCGGAAGGACAAGCACGTCCCCTGCTCTCGATCCCGGATTCCAAAAAACAATTTGAAGTAGCACAGAAAGTGATTAGTG
AAAGTTGGAATGTTCGTGAAGTGGAAAACTATGTTTCCAATTTACTAAACCCTGATAAAAAATCGAATTCCTCTTCTAGT
GTTCCAGACAAACGAGATGTTAGCATTGTGAAATTGGAAACAAAATTAAGAAACAAATTCAGTTCCAAAGTGGAAGTGTC
CCACAATGAAACAAATGGCAAAGGCAAAATTGTTTTTTCTTACGCAAATCTAAGTGATATGGAAAGGATCTTAGAGCAGC
TCGGTGTGAAATTGTAA

Upstream 100 bases:

>100_bases
ACCTTCGTTTGGAAAACCAATCAACTACTATGATCCTGATGGTGTTGGTGCCAAAAGTTATAAAAGTTTAGCGGAAGAAA
TTGTAGGGAGGGCATAAGTT

Downstream 100 bases:

>100_bases
TTTCGCCAATCTTTCATATAACTCACTTTGTTTTAAGAGTTCGTCATGTGTTCCAACGGACTCAATCTCCCCTTCTCTTA
TCACCACAATCTGATTGGAT

Product: chromosome partitioning protein ParB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MALGKGKVLGRGLGNLIPVNENNVEISKEELSGLREIKVSEISPNPHQPRKQFSDVSIQELSNTIIEHGVIQPIVVQKNP
SGSGFILVAGERRLRACKLAGFAKIPAIVRDLSEADMMELALIENIQRENLNPMDEAYAYQAIIDKRALKVTDLATRVGK
NRATISNLIRLLSLPKPLQDWVKEGKLSEGQARPLLSIPDSKKQFEVAQKVISESWNVREVENYVSNLLNPDKKSNSSSS
VPDKRDVSIVKLETKLRNKFSSKVEVSHNETNGKGKIVFSYANLSDMERILEQLGVKL

Sequences:

>Translated_298_residues
MALGKGKVLGRGLGNLIPVNENNVEISKEELSGLREIKVSEISPNPHQPRKQFSDVSIQELSNTIIEHGVIQPIVVQKNP
SGSGFILVAGERRLRACKLAGFAKIPAIVRDLSEADMMELALIENIQRENLNPMDEAYAYQAIIDKRALKVTDLATRVGK
NRATISNLIRLLSLPKPLQDWVKEGKLSEGQARPLLSIPDSKKQFEVAQKVISESWNVREVENYVSNLLNPDKKSNSSSS
VPDKRDVSIVKLETKLRNKFSSKVEVSHNETNGKGKIVFSYANLSDMERILEQLGVKL
>Mature_297_residues
ALGKGKVLGRGLGNLIPVNENNVEISKEELSGLREIKVSEISPNPHQPRKQFSDVSIQELSNTIIEHGVIQPIVVQKNPS
GSGFILVAGERRLRACKLAGFAKIPAIVRDLSEADMMELALIENIQRENLNPMDEAYAYQAIIDKRALKVTDLATRVGKN
RATISNLIRLLSLPKPLQDWVKEGKLSEGQARPLLSIPDSKKQFEVAQKVISESWNVREVENYVSNLLNPDKKSNSSSSV
PDKRDVSIVKLETKLRNKFSSKVEVSHNETNGKGKIVFSYANLSDMERILEQLGVKL

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33128; Mature: 32996

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALGKGKVLGRGLGNLIPVNENNVEISKEELSGLREIKVSEISPNPHQPRKQFSDVSIQE
CCCCCCCHHHCCCCCEECCCCCCCEECHHHHHHHHHEEEECCCCCCCCHHHHHCCCHHHH
LSNTIIEHGVIQPIVVQKNPSGSGFILVAGERRLRACKLAGFAKIPAIVRDLSEADMMEL
HHHHHHHCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ALIENIQRENLNPMDEAYAYQAIIDKRALKVTDLATRVGKNRATISNLIRLLSLPKPLQD
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH
WVKEGKLSEGQARPLLSIPDSKKQFEVAQKVISESWNVREVENYVSNLLNPDKKSNSSSS
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
VPDKRDVSIVKLETKLRNKFSSKVEVSHNETNGKGKIVFSYANLSDMERILEQLGVKL
CCCCCCCEEEEHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALGKGKVLGRGLGNLIPVNENNVEISKEELSGLREIKVSEISPNPHQPRKQFSDVSIQE
CCCCCCHHHCCCCCEECCCCCCCEECHHHHHHHHHEEEECCCCCCCCHHHHHCCCHHHH
LSNTIIEHGVIQPIVVQKNPSGSGFILVAGERRLRACKLAGFAKIPAIVRDLSEADMMEL
HHHHHHHCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ALIENIQRENLNPMDEAYAYQAIIDKRALKVTDLATRVGKNRATISNLIRLLSLPKPLQD
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH
WVKEGKLSEGQARPLLSIPDSKKQFEVAQKVISESWNVREVENYVSNLLNPDKKSNSSSS
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
VPDKRDVSIVKLETKLRNKFSSKVEVSHNETNGKGKIVFSYANLSDMERILEQLGVKL
CCCCCCCEEEEHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]