| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222775
Identifier: 183222775
GI number: 183222775
Start: 3554834
End: 3555358
Strand: Reverse
Name: 183222775
Synonym: LEPBI_I3434
Alternate gene names: NA
Gene position: 3555358-3554834 (Counterclockwise)
Preceding gene: 183222776
Following gene: 183222770
Centisome position: 98.77
GC content: 35.62
Gene sequence:
>525_bases ATGTTTTCCTTCCCTCGTTTGATTCTTTTTATCTTTCACATAACAATCATTAGCATATTATCTGTATTACATTTCAAACC ATTACACGCAGAACCATATGGAATGGCAGGATGCGGTCTTGGTTCTATGGTGCCTGTTTGGAAAAATGACATTGGTCAAA TCCTTGCTGCAACAACCAATATCAGTTTTTCTTCTCAAACATTTGGAATCACATCGGGAACTTCCAATTGTACAAATGAC GGTATCGTAAAAAAAGAAATGGCCCAAGAAGTATTCATCGCTTACAACGAAGCACCTTTAGAACTCGAAACGACCAAAGG TTCTGGCGAAAGGATTCGTGCCATGGCAACTCTATTAGGTTGTCCAACACATGCTTCTGAATTGGGCAAACTCATGAAAG AAAACCATTCATATCTTTTTGCTAAATCTAAATTAGAAACAGAAATTCGTTCCAAAGAAATTTTAACACGAATTAAAACA CAAATAGCTTCTGATAAAACTTTAAGTTTAGTTTGTTCTCATTAA
Upstream 100 bases:
>100_bases ATTTCGATGGCAGGAGAAGTTTTGGCACAAGGTTCACACCATCCTCAGATCGACAGAACTTCCGATTCCTTATTTACGTT TTAGAATTGGAGTTTGATTT
Downstream 100 bases:
>100_bases TCTCGGATCACACGTGAAATTTCGGAGTTGTATCGATAAGCAGCTTCGGTTTGACCTAAGTATCCATAAGCACCAAGTTC AAATAAAAAAGAAGCTGTGA
Product: putative signal peptide
Products: orotate; 5-phospho-alpha-D-ribose 1-diphosphate
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MFSFPRLILFIFHITIISILSVLHFKPLHAEPYGMAGCGLGSMVPVWKNDIGQILAATTNISFSSQTFGITSGTSNCTND GIVKKEMAQEVFIAYNEAPLELETTKGSGERIRAMATLLGCPTHASELGKLMKENHSYLFAKSKLETEIRSKEILTRIKT QIASDKTLSLVCSH
Sequences:
>Translated_174_residues MFSFPRLILFIFHITIISILSVLHFKPLHAEPYGMAGCGLGSMVPVWKNDIGQILAATTNISFSSQTFGITSGTSNCTND GIVKKEMAQEVFIAYNEAPLELETTKGSGERIRAMATLLGCPTHASELGKLMKENHSYLFAKSKLETEIRSKEILTRIKT QIASDKTLSLVCSH >Mature_174_residues MFSFPRLILFIFHITIISILSVLHFKPLHAEPYGMAGCGLGSMVPVWKNDIGQILAATTNISFSSQTFGITSGTSNCTND GIVKKEMAQEVFIAYNEAPLELETTKGSGERIRAMATLLGCPTHASELGKLMKENHSYLFAKSKLETEIRSKEILTRIKT QIASDKTLSLVCSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.2.10
Molecular weight: Translated: 19125; Mature: 19125
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSFPRLILFIFHITIISILSVLHFKPLHAEPYGMAGCGLGSMVPVWKNDIGQILAATTN CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC ISFSSQTFGITSGTSNCTNDGIVKKEMAQEVFIAYNEAPLELETTKGSGERIRAMATLLG CCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHEECCCCCEEEECCCCCHHHHHHHHHHC CPTHASELGKLMKENHSYLFAKSKLETEIRSKEILTRIKTQIASDKTLSLVCSH CCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MFSFPRLILFIFHITIISILSVLHFKPLHAEPYGMAGCGLGSMVPVWKNDIGQILAATTN CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC ISFSSQTFGITSGTSNCTNDGIVKKEMAQEVFIAYNEAPLELETTKGSGERIRAMATLLG CCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHEECCCCCEEEECCCCCHHHHHHHHHHC CPTHASELGKLMKENHSYLFAKSKLETEIRSKEILTRIKTQIASDKTLSLVCSH CCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: orotidine 5'-phosphate; diphosphate
Specific reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA