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The map label for this gene is yebA [H]

Identifier: 183222769

GI number: 183222769

Start: 3547175

End: 3548149

Strand: Reverse

Name: yebA [H]

Synonym: LEPBI_I3428

Alternate gene names: 183222769

Gene position: 3548149-3547175 (Counterclockwise)

Preceding gene: 183222770

Following gene: 183222767

Centisome position: 98.57

GC content: 36.62

Gene sequence:

>975_bases
ATGATGGTTCGTTCTATTTCTATCCTATCCTTCATTTTATTTTTTGTCCAAGCCGTTCCCGCAGAATCTCGCGAAGTCAA
AAAGAAAATTCCAAAACATACTGTAAGCTCTGGAAATTATTTTGTTAAAAAAGAAGAGAAGAATTTTTCGCTTCTGATGG
AAGCTCGCCGTTTTGGTCGAGGGGAAGTGATTTTTTTACGTTTAACTCCGAAAGATAAAAAATGGATCAATGAATCATAT
AAACTGAGTTGGTTAGGGAAGGATGTAATCCTAACCAAACGGGAAAATAGTATGATTGCTTTTTTGCCCATTTCTCCTGA
CACTCCGGCGGGAGCGATGACTTTGGAAATCGTTTCCAAAATCTTTTTTGTGAAACGGGGGCAAAAACAATATCAAATTA
TATTGGAGCCAACCAAGTTCCAAGTGATCAAAAAAAACCAACAGATCAAAGTAGATGAAAAATTTGTCACGAAGGAACTT
CCAAAAGAAACTTTGGATTTTATCCAAGAGTGTAAAAATGCGAAAGAAACCGCATTTACGAAATCAAGTCAATTGCAGTT
CCAAAAAAACTTTAAAAATCCACTCGAATCCATTTACATTACAAGTAAGTTCTATGTTAGGCGAGACTATAATAACAAAC
AAGGCCGTCCACATGGAGGAGTTGATTTTCGAGGTAAAACGGGAACACCAATTCTAGCGATCCAAGATGGAACTGTTGTC
TTAGCTCAAAAAACATACTATGAAGGAAATTTTACCATCATCGATCATGGAAACAAAATCTTTTCCTTCTATATGCACCA
AGACGAAATCAAAGTAAAGGTGGGTGAATTGGTAAAACAAGGACAACAAATTGGAACTGTTGGTACGACAGGTATGTCTA
CAGGTCCTCACTTACATTTAGGTGCAAAAATCAATGGAGTGTTAGTGGATCCACTTTCTCTGATTGCATTACAATCCATT
TCTGAATCGAATTGA

Upstream 100 bases:

>100_bases
CCAAGGTTATTTGTATAGTAAACCCCTCCCTGAAGATGAATTTGTTGTCTTTGTGCAAAAATTTAACGAATCTGCCAAAA
CAAAATAGCCGAAATTTTGA

Downstream 100 bases:

>100_bases
TGCCAAAAATTCTCGAATCACTTGTTCGTGAATTTCTCCTTTTTCAAGATTTTCAGTGATATGTAACAAAAGTTTGTCGT
GATTTGAGTTTTCTAAAATC

Product: M37 familypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MMVRSISILSFILFFVQAVPAESREVKKKIPKHTVSSGNYFVKKEEKNFSLLMEARRFGRGEVIFLRLTPKDKKWINESY
KLSWLGKDVILTKRENSMIAFLPISPDTPAGAMTLEIVSKIFFVKRGQKQYQIILEPTKFQVIKKNQQIKVDEKFVTKEL
PKETLDFIQECKNAKETAFTKSSQLQFQKNFKNPLESIYITSKFYVRRDYNNKQGRPHGGVDFRGKTGTPILAIQDGTVV
LAQKTYYEGNFTIIDHGNKIFSFYMHQDEIKVKVGELVKQGQQIGTVGTTGMSTGPHLHLGAKINGVLVDPLSLIALQSI
SESN

Sequences:

>Translated_324_residues
MMVRSISILSFILFFVQAVPAESREVKKKIPKHTVSSGNYFVKKEEKNFSLLMEARRFGRGEVIFLRLTPKDKKWINESY
KLSWLGKDVILTKRENSMIAFLPISPDTPAGAMTLEIVSKIFFVKRGQKQYQIILEPTKFQVIKKNQQIKVDEKFVTKEL
PKETLDFIQECKNAKETAFTKSSQLQFQKNFKNPLESIYITSKFYVRRDYNNKQGRPHGGVDFRGKTGTPILAIQDGTVV
LAQKTYYEGNFTIIDHGNKIFSFYMHQDEIKVKVGELVKQGQQIGTVGTTGMSTGPHLHLGAKINGVLVDPLSLIALQSI
SESN
>Mature_324_residues
MMVRSISILSFILFFVQAVPAESREVKKKIPKHTVSSGNYFVKKEEKNFSLLMEARRFGRGEVIFLRLTPKDKKWINESY
KLSWLGKDVILTKRENSMIAFLPISPDTPAGAMTLEIVSKIFFVKRGQKQYQIILEPTKFQVIKKNQQIKVDEKFVTKEL
PKETLDFIQECKNAKETAFTKSSQLQFQKNFKNPLESIYITSKFYVRRDYNNKQGRPHGGVDFRGKTGTPILAIQDGTVV
LAQKTYYEGNFTIIDHGNKIFSFYMHQDEIKVKVGELVKQGQQIGTVGTTGMSTGPHLHLGAKINGVLVDPLSLIALQSI
SESN

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=116, Percent_Identity=45.6896551724138, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1789099, Length=94, Percent_Identity=39.3617021276596, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 36877; Mature: 36877

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVRSISILSFILFFVQAVPAESREVKKKIPKHTVSSGNYFVKKEEKNFSLLMEARRFGR
CCEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCC
GEVIFLRLTPKDKKWINESYKLSWLGKDVILTKRENSMIAFLPISPDTPAGAMTLEIVSK
CCEEEEEECCCCHHHCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHH
IFFVKRGQKQYQIILEPTKFQVIKKNQQIKVDEKFVTKELPKETLDFIQECKNAKETAFT
HHHHHCCCCEEEEEECCCEEEEEECCCEEEECHHHHHHHCCHHHHHHHHHHCCCHHHHHC
KSSQLQFQKNFKNPLESIYITSKFYVRRDYNNKQGRPHGGVDFRGKTGTPILAIQDGTVV
CCHHHHHHHHHCCHHHHEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEECCEEE
LAQKTYYEGNFTIIDHGNKIFSFYMHQDEIKVKVGELVKQGQQIGTVGTTGMSTGPHLHL
EEEEEEECCCEEEEECCCEEEEEEEECCHHEEEHHHHHHCCCCCCCEECCCCCCCCEEEE
GAKINGVLVDPLSLIALQSISESN
CCEECEEEECHHHHHHHHHHCCCC
>Mature Secondary Structure
MMVRSISILSFILFFVQAVPAESREVKKKIPKHTVSSGNYFVKKEEKNFSLLMEARRFGR
CCEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCC
GEVIFLRLTPKDKKWINESYKLSWLGKDVILTKRENSMIAFLPISPDTPAGAMTLEIVSK
CCEEEEEECCCCHHHCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHH
IFFVKRGQKQYQIILEPTKFQVIKKNQQIKVDEKFVTKELPKETLDFIQECKNAKETAFT
HHHHHCCCCEEEEEECCCEEEEEECCCEEEECHHHHHHHCCHHHHHHHHHHCCCHHHHHC
KSSQLQFQKNFKNPLESIYITSKFYVRRDYNNKQGRPHGGVDFRGKTGTPILAIQDGTVV
CCHHHHHHHHHCCHHHHEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEECCEEE
LAQKTYYEGNFTIIDHGNKIFSFYMHQDEIKVKVGELVKQGQQIGTVGTTGMSTGPHLHL
EEEEEEECCCEEEEECCCEEEEEEEECCHHEEEHHHHHHCCCCCCCEECCCCCCCCEEEE
GAKINGVLVDPLSLIALQSISESN
CCEECEEEECHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]