| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222746
Identifier: 183222746
GI number: 183222746
Start: 3524344
End: 3525417
Strand: Reverse
Name: 183222746
Synonym: LEPBI_I3404
Alternate gene names: NA
Gene position: 3525417-3524344 (Counterclockwise)
Preceding gene: 183222747
Following gene: 183222745
Centisome position: 97.94
GC content: 40.6
Gene sequence:
>1074_bases ATGCATCCGGGTTTCTTACCTAACCATTTCATTCCAGTATTTGTGTTTTTCAAATTTTTCTCATCTACATCGAACCGAGT CAGTTTTTTTTTAATCCTGTGTCACTTCGGCATGGGTTTTGGACTAGTCTCTCCATTGTTTGCCGAAACCACCATCATTG AAAATGAAGAGGATGAAAAACGAGTTTTAGAAAACCATGCGTTTGAAAAATTAAGGTTTGGATTAGCCAATCACATCCAT TACTACAAAGTCAAAAAAACAAAAAATACGGTCGTAGAACAAAGGTCAGGTCGCAAACGTTTGTATGACCATAATTTGAT ATTACGTTCCATGTTTCGGAATCGAATTTTACACCACCAGTATGGTTCCATTGGACGTTTGTTAGTTGGTGCAAGTTTTA TTGATTTTGGAAGTGCCATTCTTTATGAAGAAGGAGCTGTGACCGTCAGAGATTTGTATGAAGACCAGTTCCTCGCGAAA TACATCAAAAAAATTGTCGCAACCGACATCAATGACCCTGAATACGATCATACCCGTTATATCGAAATCCATCTGACGGA ACGCGATCCGTTTCCGTTTGCCTTTAACGAAATTCCCTATCGATTGGATGACCCATCCTACATTCGCATTTTGACAAAAC TTTATACTCCCAATGAATTCTCGCCCGTAATCTTTCGGAGCACCAATTCTGGACCCGATTTGTTTTACACTGTGGAAGAA ATGAAGGAACACTTTCGATCCGTTTTGGATGCCAACCCTCACAGGACCATTTTGTATTTTTTCAACCGTTACATTTTCTT TCGAACACCCTGTGAATCCAAGTTCCAACTGATTGGAACCATCGATGAAAAGGTGGGGGTGAACCATAGTTTCAGTGCCT GGCGGTATGTGGATTGGAACAAACGGGAATTTTCAGAGGCGATTGACCCCAATTTTCGATACATTCGGATCGCAGAGGAA CGAAATGAAAGTAGGGCAGACAGGCTCGATGCGATGATTTTGGGCTATTCTTGCCAAATCCAAGCGAAAATGAAGTACTA CCGTCACAAATTCACAAAAACTATGACGAAATGA
Upstream 100 bases:
>100_bases AAGAAAGAATGATGGAAAAAACAGGTGGTCCCATCCTCGGCCAAAGGAATTAAGATTCTAACTTACCTTCGAAACATAGA CCCGGAATCGTATTTTCAAA
Downstream 100 bases:
>100_bases TGATTTTTTTACTTTTCTTGTGAGGCGAACTCTGTACGTTTTTCCTAGAACACCCAGAGAGAGGTAAACCCATGGGGAAT TCCTATATTATTGATGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MHPGFLPNHFIPVFVFFKFFSSTSNRVSFFLILCHFGMGFGLVSPLFAETTIIENEEDEKRVLENHAFEKLRFGLANHIH YYKVKKTKNTVVEQRSGRKRLYDHNLILRSMFRNRILHHQYGSIGRLLVGASFIDFGSAILYEEGAVTVRDLYEDQFLAK YIKKIVATDINDPEYDHTRYIEIHLTERDPFPFAFNEIPYRLDDPSYIRILTKLYTPNEFSPVIFRSTNSGPDLFYTVEE MKEHFRSVLDANPHRTILYFFNRYIFFRTPCESKFQLIGTIDEKVGVNHSFSAWRYVDWNKREFSEAIDPNFRYIRIAEE RNESRADRLDAMILGYSCQIQAKMKYYRHKFTKTMTK
Sequences:
>Translated_357_residues MHPGFLPNHFIPVFVFFKFFSSTSNRVSFFLILCHFGMGFGLVSPLFAETTIIENEEDEKRVLENHAFEKLRFGLANHIH YYKVKKTKNTVVEQRSGRKRLYDHNLILRSMFRNRILHHQYGSIGRLLVGASFIDFGSAILYEEGAVTVRDLYEDQFLAK YIKKIVATDINDPEYDHTRYIEIHLTERDPFPFAFNEIPYRLDDPSYIRILTKLYTPNEFSPVIFRSTNSGPDLFYTVEE MKEHFRSVLDANPHRTILYFFNRYIFFRTPCESKFQLIGTIDEKVGVNHSFSAWRYVDWNKREFSEAIDPNFRYIRIAEE RNESRADRLDAMILGYSCQIQAKMKYYRHKFTKTMTK >Mature_357_residues MHPGFLPNHFIPVFVFFKFFSSTSNRVSFFLILCHFGMGFGLVSPLFAETTIIENEEDEKRVLENHAFEKLRFGLANHIH YYKVKKTKNTVVEQRSGRKRLYDHNLILRSMFRNRILHHQYGSIGRLLVGASFIDFGSAILYEEGAVTVRDLYEDQFLAK YIKKIVATDINDPEYDHTRYIEIHLTERDPFPFAFNEIPYRLDDPSYIRILTKLYTPNEFSPVIFRSTNSGPDLFYTVEE MKEHFRSVLDANPHRTILYFFNRYIFFRTPCESKFQLIGTIDEKVGVNHSFSAWRYVDWNKREFSEAIDPNFRYIRIAEE RNESRADRLDAMILGYSCQIQAKMKYYRHKFTKTMTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42467; Mature: 42467
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPGFLPNHFIPVFVFFKFFSSTSNRVSFFLILCHFGMGFGLVSPLFAETTIIENEEDEK CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCHHH RVLENHAFEKLRFGLANHIHYYKVKKTKNTVVEQRSGRKRLYDHNLILRSMFRNRILHHQ HHHHHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC YGSIGRLLVGASFIDFGSAILYEEGAVTVRDLYEDQFLAKYIKKIVATDINDPEYDHTRY CCCHHHHHHHHHHHHHCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE IEIHLTERDPFPFAFNEIPYRLDDPSYIRILTKLYTPNEFSPVIFRSTNSGPDLFYTVEE EEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEHHH MKEHFRSVLDANPHRTILYFFNRYIFFRTPCESKFQLIGTIDEKVGVNHSFSAWRYVDWN HHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCCCEEEEHHHHHCCCCCCCCEEEECCC KREFSEAIDPNFRYIRIAEERNESRADRLDAMILGYSCQIQAKMKYYRHKFTKTMTK HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHEEEEEEEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHPGFLPNHFIPVFVFFKFFSSTSNRVSFFLILCHFGMGFGLVSPLFAETTIIENEEDEK CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCHHH RVLENHAFEKLRFGLANHIHYYKVKKTKNTVVEQRSGRKRLYDHNLILRSMFRNRILHHQ HHHHHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC YGSIGRLLVGASFIDFGSAILYEEGAVTVRDLYEDQFLAKYIKKIVATDINDPEYDHTRY CCCHHHHHHHHHHHHHCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE IEIHLTERDPFPFAFNEIPYRLDDPSYIRILTKLYTPNEFSPVIFRSTNSGPDLFYTVEE EEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEHHH MKEHFRSVLDANPHRTILYFFNRYIFFRTPCESKFQLIGTIDEKVGVNHSFSAWRYVDWN HHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCCCEEEEHHHHHCCCCCCCCEEEECCC KREFSEAIDPNFRYIRIAEERNESRADRLDAMILGYSCQIQAKMKYYRHKFTKTMTK HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHEEEEEEEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA