| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222738
Identifier: 183222738
GI number: 183222738
Start: 3518169
End: 3518636
Strand: Reverse
Name: 183222738
Synonym: LEPBI_I3394
Alternate gene names: NA
Gene position: 3518636-3518169 (Counterclockwise)
Preceding gene: 183222739
Following gene: 183222737
Centisome position: 97.75
GC content: 36.32
Gene sequence:
>468_bases TTGCCATCCCCTCATCGAAATCAATCCAATCAGAACAAATGGAGTCAAAAATATCCACTTCCTTCGGAAGAAGTATCCTC GTATTACTTTAGTGTTCCTCAGTCGATGTTAGACCAATTGATACAAATTCGAACCTTGATCTATGAATTGGCTGAAGCAG ATGAGCGAATTGGAATGATTCAGGAATGTTTGAAATGGGGAGAACCAAGTTTTTTAACACCCATTACCAAGTCTGGTTCA ACGATTCGACTCGCGAAAGTGGACGATTCGATGTTTGGAATTTATTTCAATTGTAAAACGACCATTGCCCAAGAGATTGC CATTCAATTCCCGGAACTAAATTGTGATGGCAAACGTGCTTTAAATTTTTCTACAAATCAAAAAATTCCAAAAACCAAAC TGATTGTCTGTTTGAAGAAAGCACTATTATACCATAAACGAAAGTTTCAAATAGATAAAGAAATTTGA
Upstream 100 bases:
>100_bases CTGATTTTGGTTCTGTCAAAATTGGTGACACGGTTCGGTTTAAGGAGAGTGATGAAACCATTGGACCGGTCTTTCAATAT TAAGATTTGAGGTATTCTCG
Downstream 100 bases:
>100_bases TTCGATTCTTGGTTTAGATTCGACTTTTTCAGTCTGCGGAGGTGGATTCACAAGGGATTGTGTTTAATGCCAATTATCTT AATTATTTGGATGTTGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPSPHRNQSNQNKWSQKYPLPSEEVSSYYFSVPQSMLDQLIQIRTLIYELAEADERIGMIQECLKWGEPSFLTPITKSGS TIRLAKVDDSMFGIYFNCKTTIAQEIAIQFPELNCDGKRALNFSTNQKIPKTKLIVCLKKALLYHKRKFQIDKEI
Sequences:
>Translated_155_residues MPSPHRNQSNQNKWSQKYPLPSEEVSSYYFSVPQSMLDQLIQIRTLIYELAEADERIGMIQECLKWGEPSFLTPITKSGS TIRLAKVDDSMFGIYFNCKTTIAQEIAIQFPELNCDGKRALNFSTNQKIPKTKLIVCLKKALLYHKRKFQIDKEI >Mature_154_residues PSPHRNQSNQNKWSQKYPLPSEEVSSYYFSVPQSMLDQLIQIRTLIYELAEADERIGMIQECLKWGEPSFLTPITKSGST IRLAKVDDSMFGIYFNCKTTIAQEIAIQFPELNCDGKRALNFSTNQKIPKTKLIVCLKKALLYHKRKFQIDKEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17937; Mature: 17806
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPHRNQSNQNKWSQKYPLPSEEVSSYYFSVPQSMLDQLIQIRTLIYELAEADERIGMI CCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QECLKWGEPSFLTPITKSGSTIRLAKVDDSMFGIYFNCKTTIAQEIAIQFPELNCDGKRA HHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECHHHHHHHHHHHCCCCCCCCCEE LNFSTNQKIPKTKLIVCLKKALLYHKRKFQIDKEI ECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PSPHRNQSNQNKWSQKYPLPSEEVSSYYFSVPQSMLDQLIQIRTLIYELAEADERIGMI CCCCCCCCCCCCCHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QECLKWGEPSFLTPITKSGSTIRLAKVDDSMFGIYFNCKTTIAQEIAIQFPELNCDGKRA HHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECHHHHHHHHHHHCCCCCCCCCEE LNFSTNQKIPKTKLIVCLKKALLYHKRKFQIDKEI ECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA