| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222739
Identifier: 183222739
GI number: 183222739
Start: 3518654
End: 3519013
Strand: Reverse
Name: 183222739
Synonym: LEPBI_I3395
Alternate gene names: NA
Gene position: 3519013-3518654 (Counterclockwise)
Preceding gene: 183222740
Following gene: 183222738
Centisome position: 97.76
GC content: 41.67
Gene sequence:
>360_bases TTGGTAAATACGAGTAATGGTACTATGACCCCAACAGTGACTTTAACTGGCATTGTTTGCCACAAATGCCAATGCAAAGT AGCGGAAGTGTTAGATGGTTGCCCCTCTTGTGGCAGCGAATCCATTGAAACGATCGAATTAAAACAGAACGGAACGATTG TTTCCTTCACTGTTGTACATGTTGGTTTTGGTCATATGGCATCGCGAGCACCTTATTTACTTGCGATCGTACAAACGGAA GAAAATGTAAAACTCACGACAATCATAGATGGCGTGACTGATTTTGGTTCTGTCAAAATTGGTGACACGGTTCGGTTTAA GGAGAGTGATGAAACCATTGGACCGGTCTTTCAATATTAA
Upstream 100 bases:
>100_bases CAGTTTTCAAATGGTTATCAAATCATCGCCGGCAGTTGCATCAAAATTGAATCGTGAATCTCAAATCATAAATCTTAAAA TAAACAGATTGCATTAAAAT
Downstream 100 bases:
>100_bases GATTTGAGGTATTCTCGTTGCCATCCCCTCATCGAAATCAATCCAATCAGAACAAATGGAGTCAAAAATATCCACTTCCT TCGGAAGAAGTATCCTCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MVNTSNGTMTPTVTLTGIVCHKCQCKVAEVLDGCPSCGSESIETIELKQNGTIVSFTVVHVGFGHMASRAPYLLAIVQTE ENVKLTTIIDGVTDFGSVKIGDTVRFKESDETIGPVFQY
Sequences:
>Translated_119_residues MVNTSNGTMTPTVTLTGIVCHKCQCKVAEVLDGCPSCGSESIETIELKQNGTIVSFTVVHVGFGHMASRAPYLLAIVQTE ENVKLTTIIDGVTDFGSVKIGDTVRFKESDETIGPVFQY >Mature_119_residues MVNTSNGTMTPTVTLTGIVCHKCQCKVAEVLDGCPSCGSESIETIELKQNGTIVSFTVVHVGFGHMASRAPYLLAIVQTE ENVKLTTIIDGVTDFGSVKIGDTVRFKESDETIGPVFQY
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12758; Mature: 12758
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNTSNGTMTPTVTLTGIVCHKCQCKVAEVLDGCPSCGSESIETIELKQNGTIVSFTVVH CEECCCCEECEEEEEEEEEEECCCCCHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEE VGFGHMASRAPYLLAIVQTEENVKLTTIIDGVTDFGSVKIGDTVRFKESDETIGPVFQY ECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEECCEEEEECCCCCCCCCCCC >Mature Secondary Structure MVNTSNGTMTPTVTLTGIVCHKCQCKVAEVLDGCPSCGSESIETIELKQNGTIVSFTVVH CEECCCCEECEEEEEEEEEEECCCCCHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEE VGFGHMASRAPYLLAIVQTEENVKLTTIIDGVTDFGSVKIGDTVRFKESDETIGPVFQY ECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEECCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA