| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222727
Identifier: 183222727
GI number: 183222727
Start: 3502714
End: 3504033
Strand: Reverse
Name: 183222727
Synonym: LEPBI_I3383
Alternate gene names: NA
Gene position: 3504033-3502714 (Counterclockwise)
Preceding gene: 183222728
Following gene: 183222726
Centisome position: 97.34
GC content: 39.55
Gene sequence:
>1320_bases ATGTTATATTCTTTCCCAAACATTTTGCTGATTTATAATCAAATCCGTAAGTTCGTCCAAAACAAAACGGAAAATAATTT CCCATTCAAAAAGGAAAGGAAACTCCATCCGATTTGCCATACGAGTCAAAAGGTAGGTTTCCGTTCGTTTGTTTCGATGT ATCTATTTTTCATCATACTCGTTTCATTCACAACACAGATGTTAGCCGATGGGTGGGATGCAACCATTTGGAAGGAAAAA ACCTACCAAAACAAACGGATCTCCAGTTCTGATCCCACAGAGGGAAATGATGATTTCATCAAAATTCCCAAAAAGAAAAC TGTGACCATTGCCGAAATCAAAGGCCGTGGGATCATCAAACACATCTGGATGACATTGGCAAGTAAAGACCCAATGGCAC GAAAAAATGCCGTCATTCGAATGACTTGGGACAACCATACATATCCTTCCGTGAACGTTCCGTTAGGTGAATTTTTTGGC CAAGGCTGGGGAGAAGAATACATACTCAATTCTTTGCCACTCGTTGCTGCTCCCAAAAAAGGTAAATCAATGAACTCCTA TTTTCCGATGCCATTTGAATCGGGAGCTAAAATTGAAATTGAAAACGAATCGGAAGAAGACATTACCAATTTTTATTTTT ATATCGATTATGAAGAATGGAAATCACCTCTCGACTCACCACTCCGTTTTCATGCCGAGTGGAACCGAAGTATCACCAAA CCGAACACTTCGAACCAAAGGGAAAATGAATGGTCACTCCTTGGAGAGATGGAAAGAACAAAATTCAAAAAGGAAAATTA TTTTACTGTCCTCGAAACAGAAGGAAAAGGTCAGTTCATTGGCCTCAATCTGTATGTCGATTCACCGACACCTCTTTGGT ATGGCGAAGGAGATGATTTAATTTTTATCGATGGGAACCAAACAACCGCTACACTAAAAGGAACAGGAACCGAAGATGTG TTTAATACCGCTTGGTCCCCCAAAGAAGTGTTTATGCATCCTTATTTTGGTTATCCGAGAGTATCCGATTCCATCGGTTG GTTGGGTAAAACCCATTTGTATCGATTTTGGGTAGAATCCCCTATTCGTTTTGAAAAAAATTTCCTATTCTTACTCGAAC ATGGTCATGCAAATTCCTTGACCTTAGATTTGATCTCTGTTGCTTATTGGTATCAGAGTCTGAATCCAAAACCAATGAAG GTTTTGCCGAAAAAAGAGTTCAGGGTGAACCAACCTGAGATTAATTTTCGTCATATCCATAAGTGGCGGGATTCATTCCG AAGTGAAAAAGCAAATGGGGAAATTTGGGGAAATGAATGA
Upstream 100 bases:
>100_bases CATCCATTTGTATGTATTATTTGAAATTTTTTTACAGTCACTCGTACAGGCAGGGATTTTCCTTTGGTTTATGAGAAAGC TGTAACGTAGAGCGAATCGT
Downstream 100 bases:
>100_bases GTTTCATACAGAGGCATTGTCAAAGGAAATAGTTTCCCAATCGATTGATTCGATTGTCGTTTTGGATACCAACCAAAAGA TTTTATTTAGTAATGTAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MLYSFPNILLIYNQIRKFVQNKTENNFPFKKERKLHPICHTSQKVGFRSFVSMYLFFIILVSFTTQMLADGWDATIWKEK TYQNKRISSSDPTEGNDDFIKIPKKKTVTIAEIKGRGIIKHIWMTLASKDPMARKNAVIRMTWDNHTYPSVNVPLGEFFG QGWGEEYILNSLPLVAAPKKGKSMNSYFPMPFESGAKIEIENESEEDITNFYFYIDYEEWKSPLDSPLRFHAEWNRSITK PNTSNQRENEWSLLGEMERTKFKKENYFTVLETEGKGQFIGLNLYVDSPTPLWYGEGDDLIFIDGNQTTATLKGTGTEDV FNTAWSPKEVFMHPYFGYPRVSDSIGWLGKTHLYRFWVESPIRFEKNFLFLLEHGHANSLTLDLISVAYWYQSLNPKPMK VLPKKEFRVNQPEINFRHIHKWRDSFRSEKANGEIWGNE
Sequences:
>Translated_439_residues MLYSFPNILLIYNQIRKFVQNKTENNFPFKKERKLHPICHTSQKVGFRSFVSMYLFFIILVSFTTQMLADGWDATIWKEK TYQNKRISSSDPTEGNDDFIKIPKKKTVTIAEIKGRGIIKHIWMTLASKDPMARKNAVIRMTWDNHTYPSVNVPLGEFFG QGWGEEYILNSLPLVAAPKKGKSMNSYFPMPFESGAKIEIENESEEDITNFYFYIDYEEWKSPLDSPLRFHAEWNRSITK PNTSNQRENEWSLLGEMERTKFKKENYFTVLETEGKGQFIGLNLYVDSPTPLWYGEGDDLIFIDGNQTTATLKGTGTEDV FNTAWSPKEVFMHPYFGYPRVSDSIGWLGKTHLYRFWVESPIRFEKNFLFLLEHGHANSLTLDLISVAYWYQSLNPKPMK VLPKKEFRVNQPEINFRHIHKWRDSFRSEKANGEIWGNE >Mature_439_residues MLYSFPNILLIYNQIRKFVQNKTENNFPFKKERKLHPICHTSQKVGFRSFVSMYLFFIILVSFTTQMLADGWDATIWKEK TYQNKRISSSDPTEGNDDFIKIPKKKTVTIAEIKGRGIIKHIWMTLASKDPMARKNAVIRMTWDNHTYPSVNVPLGEFFG QGWGEEYILNSLPLVAAPKKGKSMNSYFPMPFESGAKIEIENESEEDITNFYFYIDYEEWKSPLDSPLRFHAEWNRSITK PNTSNQRENEWSLLGEMERTKFKKENYFTVLETEGKGQFIGLNLYVDSPTPLWYGEGDDLIFIDGNQTTATLKGTGTEDV FNTAWSPKEVFMHPYFGYPRVSDSIGWLGKTHLYRFWVESPIRFEKNFLFLLEHGHANSLTLDLISVAYWYQSLNPKPMK VLPKKEFRVNQPEINFRHIHKWRDSFRSEKANGEIWGNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51462; Mature: 51462
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYSFPNILLIYNQIRKFVQNKTENNFPFKKERKLHPICHTSQKVGFRSFVSMYLFFIIL CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHH VSFTTQMLADGWDATIWKEKTYQNKRISSSDPTEGNDDFIKIPKKKTVTIAEIKGRGIIK HHHHHHHHHCCCCCEEECHHHCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCHHH HIWMTLASKDPMARKNAVIRMTWDNHTYPSVNVPLGEFFGQGWGEEYILNSLPLVAAPKK HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHCCCEEECCCC GKSMNSYFPMPFESGAKIEIENESEEDITNFYFYIDYEEWKSPLDSPLRFHAEWNRSITK CCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEHHHHCCCCCCCEEEEEECCCCCCC PNTSNQRENEWSLLGEMERTKFKKENYFTVLETEGKGQFIGLNLYVDSPTPLWYGEGDDL CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCCEEECCCCCE IFIDGNQTTATLKGTGTEDVFNTAWSPKEVFMHPYFGYPRVSDSIGWLGKTHLYRFWVES EEEECCCEEEEEECCCCHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCHHHEEEEECCC PIRFEKNFLFLLEHGHANSLTLDLISVAYWYQSLNPKPMKVLPKKEFRVNQPEINFRHIH CCEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHCCCCCCCCCHHHHH KWRDSFRSEKANGEIWGNE HHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLYSFPNILLIYNQIRKFVQNKTENNFPFKKERKLHPICHTSQKVGFRSFVSMYLFFIIL CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHH VSFTTQMLADGWDATIWKEKTYQNKRISSSDPTEGNDDFIKIPKKKTVTIAEIKGRGIIK HHHHHHHHHCCCCCEEECHHHCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCHHH HIWMTLASKDPMARKNAVIRMTWDNHTYPSVNVPLGEFFGQGWGEEYILNSLPLVAAPKK HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHCCCEEECCCC GKSMNSYFPMPFESGAKIEIENESEEDITNFYFYIDYEEWKSPLDSPLRFHAEWNRSITK CCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEHHHHCCCCCCCEEEEEECCCCCCC PNTSNQRENEWSLLGEMERTKFKKENYFTVLETEGKGQFIGLNLYVDSPTPLWYGEGDDL CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCCEEECCCCCE IFIDGNQTTATLKGTGTEDVFNTAWSPKEVFMHPYFGYPRVSDSIGWLGKTHLYRFWVES EEEECCCEEEEEECCCCHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCHHHEEEEECCC PIRFEKNFLFLLEHGHANSLTLDLISVAYWYQSLNPKPMKVLPKKEFRVNQPEINFRHIH CCEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHCCCCCCCCCHHHHH KWRDSFRSEKANGEIWGNE HHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA