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The map label for this gene is yahD [C]

Identifier: 183222703

GI number: 183222703

Start: 3470282

End: 3470776

Strand: Reverse

Name: yahD [C]

Synonym: LEPBI_I3359

Alternate gene names: 183222703

Gene position: 3470776-3470282 (Counterclockwise)

Preceding gene: 183222705

Following gene: 183222699

Centisome position: 96.42

GC content: 39.39

Gene sequence:

>495_bases
ATGTTCCTTTTCTTATCGAGCCGATTTTTCAAAAAATTCTTCCCTTTTGTCATAATTTTTCTGACCTCTCTTATGGGATT
TGGATGTATTGAGGATGAAACAGTTGTTAAAAACCCGCCGAGCCTCGAATTACGTCTCTTCCAAGCCGTGGAAAATGGAA
ATTTAGAAGAAGTCAAAAATCTTTTGGCCCAAGGAGTTTCCATCAATGCAAAGGATTCGCTTGGAAATTCTTCTCTGATC
AAAGCAGTCGATGAAGAGGAAATGGAACTCACAAAATTCCTAATTCAAAAAGGTGCCAATGTTAACCTTCGGAATACAAT
GGGAGAAACAGCTTTATACCGTGCGGTATACCGAGGCAATTTAGAACTGGTGAAACTCTTAGTCAAAGCTGGTGCAGAAA
CCAAGGCCAAAACTGTTGGTGGCATTAGTATTGCTGAGTTGGCGGAAGAACGTGGGGAAGAAGGAATTTTAAATTATTTA
CAAGGCTCAAAATAA

Upstream 100 bases:

>100_bases
AAGAGACGAACACCATCCCAAGAAACAAAACAGGAGCAAACCGTAAACTTGTGAGAAAAATGGATCGACGTTTCATAGTT
AAACTATTAGACTAAAACAG

Downstream 100 bases:

>100_bases
GCCAACTATCGTGTAAAATGAAAACATAAAGAACCTTTATGTTTCTAAATTCACTTGGACTCAACTTTGCGGAAACAATC
TTTACTGGTTTGTATCTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MFLFLSSRFFKKFFPFVIIFLTSLMGFGCIEDETVVKNPPSLELRLFQAVENGNLEEVKNLLAQGVSINAKDSLGNSSLI
KAVDEEEMELTKFLIQKGANVNLRNTMGETALYRAVYRGNLELVKLLVKAGAETKAKTVGGISIAELAEERGEEGILNYL
QGSK

Sequences:

>Translated_164_residues
MFLFLSSRFFKKFFPFVIIFLTSLMGFGCIEDETVVKNPPSLELRLFQAVENGNLEEVKNLLAQGVSINAKDSLGNSSLI
KAVDEEEMELTKFLIQKGANVNLRNTMGETALYRAVYRGNLELVKLLVKAGAETKAKTVGGISIAELAEERGEEGILNYL
QGSK
>Mature_164_residues
MFLFLSSRFFKKFFPFVIIFLTSLMGFGCIEDETVVKNPPSLELRLFQAVENGNLEEVKNLLAQGVSINAKDSLGNSSLI
KAVDEEEMELTKFLIQKGANVNLRNTMGETALYRAVYRGNLELVKLLVKAGAETKAKTVGGISIAELAEERGEEGILNYL
QGSK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI41327752, Length=118, Percent_Identity=33.8983050847458, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI267844887, Length=118, Percent_Identity=36.4406779661017, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI21956645, Length=110, Percent_Identity=33.6363636363636, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI18252778, Length=119, Percent_Identity=31.9327731092437, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 18127; Mature: 18127

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLFLSSRFFKKFFPFVIIFLTSLMGFGCIEDETVVKNPPSLELRLFQAVENGNLEEVKN
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHH
LLAQGVSINAKDSLGNSSLIKAVDEEEMELTKFLIQKGANVNLRNTMGETALYRAVYRGN
HHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
LELVKLLVKAGAETKAKTVGGISIAELAEERGEEGILNYLQGSK
HHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCHHHHHHHHCCCC
>Mature Secondary Structure
MFLFLSSRFFKKFFPFVIIFLTSLMGFGCIEDETVVKNPPSLELRLFQAVENGNLEEVKN
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHH
LLAQGVSINAKDSLGNSSLIKAVDEEEMELTKFLIQKGANVNLRNTMGETALYRAVYRGN
HHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
LELVKLLVKAGAETKAKTVGGISIAELAEERGEEGILNYLQGSK
HHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA