| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222705
Identifier: 183222705
GI number: 183222705
Start: 3471710
End: 3473593
Strand: Reverse
Name: 183222705
Synonym: LEPBI_I3361
Alternate gene names: NA
Gene position: 3473593-3471710 (Counterclockwise)
Preceding gene: 183222706
Following gene: 183222703
Centisome position: 96.5
GC content: 37.26
Gene sequence:
>1884_bases GTGAACAATTTTTTTATGAAAAAATCGATGAGTAGGAAAGGTCCGTTTGTGAACCATCAGATACGAAGGAACATTTTGTG TTTATTCCTAATTATGGTAATCCCAAGTGTTTCCATTTTATTTGCAGATTCTAATCGTAATTTAGACATCAATCGTATTG CTGAAAAGACAGAACGGATCTTAGTCAAAATTCCATCAAATCATACCAATCTTGACAATACTGCATTATCCTACACCTAT CCCATGTCGGATGGAACTCCTGCACCAAAACTTGTCTACATTGAATTAGGAGAGTATTTTCTCGCTTATAATGATGATCA ATCCAATGGTCGAATTATCAGTTTAGATTCTAATTTTAAATTCAGAAAAGAAATCGTGAGTCTCAAAAGTTTTCGAATTG AGGATATGATTGCCGATTCGAAAGGTCTCACCGTATTGTTATCAGAGTTTGAGGTGAAAAAAAAAGGGAAACATGAAATC AAAAATTTTCATACGGCCTACATCAACCAATATGACAAATCAGGTAGAATCAATTTTAGTACAAAAATTGTAGGAACAAA AGAATACGTTTCCGTTGGAGACCAAGGAATCGATACAACATTCGGTACACTTTCAATTACCAAGACAGCTGACAATCATT ATGCGACCTATTTTTCAACGTATCGTAAATGGGAGGATGGAGTTACACACCAAAGCGAATATCTGGCTTTATTTGATCAT AATGGAAAGCGTGTGATGAAATCGGATGGCAAATCGCAAGAAGGTTTTACTTGGAACGTGAGCCATAGCTTCCGACCGAG ATTTTTTAACGATGGAGATCAGTTGGTTATGATGACCGTGGGAGATGCCTACCCGAGAGGTTTGGTCATTGATACATTTC CCAATCGAAAACGAGAAATCCCTATCATTGTACCAAAAGCCGGTGCCAACGAAACGTACCAATATGTACCAATCTCAACT GGAGATTTATTTTCGAAAGATGGTACTACCTGGATCGTATTTGATTCTAATTTGAATCGAACCTCATACGATATTGGTCT CATCATCAAGAGTAAAGATCAACTTTCCAAACCAGTATATCTTACCAATACTTCCAAATCTAGAGAGAGGATTCCAAGGA TCGTTCCTTTTGGGGAAGACCATTTATTTTTATTGTGGATGACCGACGACGGCCCTGAAAAGGAGAAATGGTATCCCCAA ATTTCAAAAATGAAATTAGAAGCATGTTTGATACAAAAAGATGGAACGATTGTATCCAAACCTCAAAGTTTCGGTTTTGG AAACGGAATGGTATTTCGATCAGCCGCGCGATTTTTCCAATTGCCAAATGGAAAGTTTGGATGGGTCAATGATGTAACTG GATTTGCCGATCAATTGGAAATTGTTATCGTATCACCATTTCCATCGGATACTCAGATGGTTTCTACAAATGATTCGGAG AAACCAGAAAATATAGAAATCAAAATCAATCCCACTCTTGGAAAACCGTTAATCGATGCCATTTACGAGGGTAACGAAGA TCTTGGAATTTCTCTTCTGAAGCAAGGAGCAGATCCAAATACAATTTACGAAGGATGGTCTGCTTTATTATATGCTGCCT ATTTTGGAAGAACAGAAATTGTAAAAGCACTCATTTCTCATCATGCCAATACGGAATATTCCGTAGATGGTTGGAATGCA CTTCAGTTATCCGAAGTTAGAGGGCATACTCCGATTGTCCAACTACTACAACCAATGACAAAATCATTGTCGCGGACAGT TTCAAAATCACCAAATCCAAAGAATCCATTAAGGACAATCGTAAGAAATAAAAATTTACGATCAGAAATTGAACCAGTGA ATTCCAACCAAACTCTACAAATTTTAGGAACTCCAGTCCAATAA
Upstream 100 bases:
>100_bases AAATGGCTCTCTTATATGAGGGCCTTTTTTTTACCTTCTTCATCGAGTTCCTGGTTTTCTATTTCGATAAAATTTTGGTC CTTGTATTTTCCTTAAGATC
Downstream 100 bases:
>100_bases TTTGTAAACTTTTAAACTGCAGTGCCTAATGTTCAGCACTGCATTTTGAAAAACCAATTTATATTGGTGATAGGATCCCA CTTATTTCCCGTCTGTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MNNFFMKKSMSRKGPFVNHQIRRNILCLFLIMVIPSVSILFADSNRNLDINRIAEKTERILVKIPSNHTNLDNTALSYTY PMSDGTPAPKLVYIELGEYFLAYNDDQSNGRIISLDSNFKFRKEIVSLKSFRIEDMIADSKGLTVLLSEFEVKKKGKHEI KNFHTAYINQYDKSGRINFSTKIVGTKEYVSVGDQGIDTTFGTLSITKTADNHYATYFSTYRKWEDGVTHQSEYLALFDH NGKRVMKSDGKSQEGFTWNVSHSFRPRFFNDGDQLVMMTVGDAYPRGLVIDTFPNRKREIPIIVPKAGANETYQYVPIST GDLFSKDGTTWIVFDSNLNRTSYDIGLIIKSKDQLSKPVYLTNTSKSRERIPRIVPFGEDHLFLLWMTDDGPEKEKWYPQ ISKMKLEACLIQKDGTIVSKPQSFGFGNGMVFRSAARFFQLPNGKFGWVNDVTGFADQLEIVIVSPFPSDTQMVSTNDSE KPENIEIKINPTLGKPLIDAIYEGNEDLGISLLKQGADPNTIYEGWSALLYAAYFGRTEIVKALISHHANTEYSVDGWNA LQLSEVRGHTPIVQLLQPMTKSLSRTVSKSPNPKNPLRTIVRNKNLRSEIEPVNSNQTLQILGTPVQ
Sequences:
>Translated_627_residues MNNFFMKKSMSRKGPFVNHQIRRNILCLFLIMVIPSVSILFADSNRNLDINRIAEKTERILVKIPSNHTNLDNTALSYTY PMSDGTPAPKLVYIELGEYFLAYNDDQSNGRIISLDSNFKFRKEIVSLKSFRIEDMIADSKGLTVLLSEFEVKKKGKHEI KNFHTAYINQYDKSGRINFSTKIVGTKEYVSVGDQGIDTTFGTLSITKTADNHYATYFSTYRKWEDGVTHQSEYLALFDH NGKRVMKSDGKSQEGFTWNVSHSFRPRFFNDGDQLVMMTVGDAYPRGLVIDTFPNRKREIPIIVPKAGANETYQYVPIST GDLFSKDGTTWIVFDSNLNRTSYDIGLIIKSKDQLSKPVYLTNTSKSRERIPRIVPFGEDHLFLLWMTDDGPEKEKWYPQ ISKMKLEACLIQKDGTIVSKPQSFGFGNGMVFRSAARFFQLPNGKFGWVNDVTGFADQLEIVIVSPFPSDTQMVSTNDSE KPENIEIKINPTLGKPLIDAIYEGNEDLGISLLKQGADPNTIYEGWSALLYAAYFGRTEIVKALISHHANTEYSVDGWNA LQLSEVRGHTPIVQLLQPMTKSLSRTVSKSPNPKNPLRTIVRNKNLRSEIEPVNSNQTLQILGTPVQ >Mature_627_residues MNNFFMKKSMSRKGPFVNHQIRRNILCLFLIMVIPSVSILFADSNRNLDINRIAEKTERILVKIPSNHTNLDNTALSYTY PMSDGTPAPKLVYIELGEYFLAYNDDQSNGRIISLDSNFKFRKEIVSLKSFRIEDMIADSKGLTVLLSEFEVKKKGKHEI KNFHTAYINQYDKSGRINFSTKIVGTKEYVSVGDQGIDTTFGTLSITKTADNHYATYFSTYRKWEDGVTHQSEYLALFDH NGKRVMKSDGKSQEGFTWNVSHSFRPRFFNDGDQLVMMTVGDAYPRGLVIDTFPNRKREIPIIVPKAGANETYQYVPIST GDLFSKDGTTWIVFDSNLNRTSYDIGLIIKSKDQLSKPVYLTNTSKSRERIPRIVPFGEDHLFLLWMTDDGPEKEKWYPQ ISKMKLEACLIQKDGTIVSKPQSFGFGNGMVFRSAARFFQLPNGKFGWVNDVTGFADQLEIVIVSPFPSDTQMVSTNDSE KPENIEIKINPTLGKPLIDAIYEGNEDLGISLLKQGADPNTIYEGWSALLYAAYFGRTEIVKALISHHANTEYSVDGWNA LQLSEVRGHTPIVQLLQPMTKSLSRTVSKSPNPKNPLRTIVRNKNLRSEIEPVNSNQTLQILGTPVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71045; Mature: 71045
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNFFMKKSMSRKGPFVNHQIRRNILCLFLIMVIPSVSILFADSNRNLDINRIAEKTERI CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHCCCEE LVKIPSNHTNLDNTALSYTYPMSDGTPAPKLVYIELGEYFLAYNDDQSNGRIISLDSNFK EEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEECCCCCCCEEEEECCCCH FRKEIVSLKSFRIEDMIADSKGLTVLLSEFEVKKKGKHEIKNFHTAYINQYDKSGRINFS HHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEE TKIVGTKEYVSVGDQGIDTTFGTLSITKTADNHYATYFSTYRKWEDGVTHQSEYLALFDH EEEECCHHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEC NGKRVMKSDGKSQEGFTWNVSHSFRPRFFNDGDQLVMMTVGDAYPRGLVIDTFPNRKREI CCCEEECCCCCCCCCEEEECCCCCCCCEECCCCEEEEEEECCCCCCCEEEECCCCCCCCC PIIVPKAGANETYQYVPISTGDLFSKDGTTWIVFDSNLNRTSYDIGLIIKSKDQLSKPVY CEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECHHHHCCCEE LTNTSKSRERIPRIVPFGEDHLFLLWMTDDGPEKEKWYPQISKMKLEACLIQKDGTIVSK EECCCHHHHHCCCEECCCCCCEEEEEEECCCCCCHHHCCCHHHEEEEEEEEECCCCEEEC PQSFGFGNGMVFRSAARFFQLPNGKFGWVNDVTGFADQLEIVIVSPFPSDTQMVSTNDSE CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCC KPENIEIKINPTLGKPLIDAIYEGNEDLGISLLKQGADPNTIYEGWSALLYAAYFGRTEI CCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHH VKALISHHANTEYSVDGWNALQLSEVRGHTPIVQLLQPMTKSLSRTVSKSPNPKNPLRTI HHHHHHHCCCCEEECCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH VRNKNLRSEIEPVNSNQTLQILGTPVQ HHCCCCHHHCCCCCCCCEEEEEECCCC >Mature Secondary Structure MNNFFMKKSMSRKGPFVNHQIRRNILCLFLIMVIPSVSILFADSNRNLDINRIAEKTERI CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHCCCEE LVKIPSNHTNLDNTALSYTYPMSDGTPAPKLVYIELGEYFLAYNDDQSNGRIISLDSNFK EEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEECCCCCCCEEEEECCCCH FRKEIVSLKSFRIEDMIADSKGLTVLLSEFEVKKKGKHEIKNFHTAYINQYDKSGRINFS HHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEE TKIVGTKEYVSVGDQGIDTTFGTLSITKTADNHYATYFSTYRKWEDGVTHQSEYLALFDH EEEECCHHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEC NGKRVMKSDGKSQEGFTWNVSHSFRPRFFNDGDQLVMMTVGDAYPRGLVIDTFPNRKREI CCCEEECCCCCCCCCEEEECCCCCCCCEECCCCEEEEEEECCCCCCCEEEECCCCCCCCC PIIVPKAGANETYQYVPISTGDLFSKDGTTWIVFDSNLNRTSYDIGLIIKSKDQLSKPVY CEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECHHHHCCCEE LTNTSKSRERIPRIVPFGEDHLFLLWMTDDGPEKEKWYPQISKMKLEACLIQKDGTIVSK EECCCHHHHHCCCEECCCCCCEEEEEEECCCCCCHHHCCCHHHEEEEEEEEECCCCEEEC PQSFGFGNGMVFRSAARFFQLPNGKFGWVNDVTGFADQLEIVIVSPFPSDTQMVSTNDSE CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCC KPENIEIKINPTLGKPLIDAIYEGNEDLGISLLKQGADPNTIYEGWSALLYAAYFGRTEI CCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHH VKALISHHANTEYSVDGWNALQLSEVRGHTPIVQLLQPMTKSLSRTVSKSPNPKNPLRTI HHHHHHHCCCCEEECCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH VRNKNLRSEIEPVNSNQTLQILGTPVQ HHCCCCHHHCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA