| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222692
Identifier: 183222692
GI number: 183222692
Start: 3455939
End: 3457702
Strand: Reverse
Name: 183222692
Synonym: LEPBI_I3348
Alternate gene names: NA
Gene position: 3457702-3455939 (Counterclockwise)
Preceding gene: 183222696
Following gene: 183222691
Centisome position: 96.06
GC content: 37.3
Gene sequence:
>1764_bases ATGGTTTGTTTGTATTGTCAAAACGGTTCTAAAACATTTTCCCGATTGGAACCCGTCCAAGATTTAAACCAAACTCCGGA GTTTCCTATCCATGACATTGTTGGAACAATGCGAAGACCATTTCGGGACATTTATGAATGTTTGGATTGCCATCAATTCT GGTGGATCCGAGTCAAAGGGACAGGGGACCCGCGTTCCACCTATCCTGAGTATTACGAACAAACTGCCGAATTATTGGAT GACCAACGTTCAGAATTGATCCGAAACCCCACTGTTTCGCGTTTATTACAACATACCGAATCCCAGTTTCCATATACTTT TTTTCCAGAGGTTTTGGAATCCATAGCCACAAACGAGAGAGATTCGCTCAAAAACATTTTTTTAGACCGAGTTCCCCATT TGCCAAGTCCAGCGAAGTTATGGTTGCGATCATGGTTCCAAACTCAATTTCCCGAAGAATACAAAGTACAAAAGGAACAG GGATTTCCAAACAAAGCGAAATTGGTTTCCACATGGGAATCAAATGAATTGGTTTTGGTTAGTGAATGGATCGCCATCGA TCAATTTGTGGTTTTGTCAGTTTTGGATGATTCCTATACTATCACGGCCTTCCAACTTCCTGAGAAAAAAATCATTTGGA AACAAAAATTGGGTCGTCCATTTTTAGAAGGAATTTCCATCCCCAATTTATTTTACCATTCAGGGTATTTATGTTATTAC CAAGGATTTCAAAAAGGTTCAGAGTATTTTTCAAAGCTCAATCGACCAAACGAACTGCTTGTGTTTGATTTGTCTGGAAA TCTTTTGTTACATCTCCCACTGTCCTTTCGCTGTTATGAAATTCTATCGACAGAAGAACGTGATGTATCGGAAAACCGCG TGGTCCATAATTTTCAATTTTCGATTCTTTCGAATACTTTATACATTCCCTATTCCAATGAAGTTCATATCTATGATTTA CAATCAAAAGAACTCCTTCAAAAGATCAAAACACCCAATGGTGATCCATTTTCGGGCAAAGCATTTGAAACTGAATCAGG AGTCATTTTATTCCATACCGTAAAAGGTGTGTTTGCGGTGAATGAGAAATGGGAGGTCGTATACCAATACCATTCCAAGT TTCATCCCGTTTTCATTGATTCCCAACTCAATTTCTATTATTATTATTCAATTGTAGATCAAATCCAAACAGGAGAACAA AAACGATTTTTCCAAAATGATGATTCTGGAAGCAATTTATTATTCGAATTGGTTTCTCCACCAGTAGAGTTTCCCAATGG AATTTTAACTCCGTTTGCTTGGGACAAAACATACCTACTCAACCAAAATTTGGAAATAACAAAGGAACTGAATTTCACTT CTTCCGATACTCTTGGGCCCCATGCGTTTGGCACAAACAAAATACCCATACTTGCAACAGAAGATCGTATTTGTATTACG AATGATTACCGTTCGATCATCATGATTGATTTTATTGGAAATCTAATCTGTAATCATCCCATCCAATCGGAAGTCATCCA AGTTTTAAGTTTTGATGGGAAACACTCGGTTGTGATCCTTTCTTGTTTTGATGAATATAGCGAGGAAGACCAAATAGAAT TGTTTTTTTTGGATCCTAAAGGAATCATTTTACTTAAAAAAATTTTACCAGGCCCCGAGGGTTTGAGTGTGAGTTTTGAT GGAATCTTGGTCTTTGCTCAAAACAATAAAATCTACACATTGGATATGTTTCAGGAAAGCGATTTTTATCTCAAAACAAT ATGA
Upstream 100 bases:
>100_bases AAATTGCCAAGAACTATGTGGGTGGAACCAGAGAAATCCCAATCTTGGAAATTGACTTGACCAAGTAGGGTTTTTAGAAA TAACTAAACACCTTCTCATT
Downstream 100 bases:
>100_bases AAGTTTTGCGTGATTCATTCATCATTGGTTTTCTTTTTGTATTTTGTTTCGAAGTACAAGCTGAATCTGAATCCATTGAT CTAACTTTATTACAAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MVCLYCQNGSKTFSRLEPVQDLNQTPEFPIHDIVGTMRRPFRDIYECLDCHQFWWIRVKGTGDPRSTYPEYYEQTAELLD DQRSELIRNPTVSRLLQHTESQFPYTFFPEVLESIATNERDSLKNIFLDRVPHLPSPAKLWLRSWFQTQFPEEYKVQKEQ GFPNKAKLVSTWESNELVLVSEWIAIDQFVVLSVLDDSYTITAFQLPEKKIIWKQKLGRPFLEGISIPNLFYHSGYLCYY QGFQKGSEYFSKLNRPNELLVFDLSGNLLLHLPLSFRCYEILSTEERDVSENRVVHNFQFSILSNTLYIPYSNEVHIYDL QSKELLQKIKTPNGDPFSGKAFETESGVILFHTVKGVFAVNEKWEVVYQYHSKFHPVFIDSQLNFYYYYSIVDQIQTGEQ KRFFQNDDSGSNLLFELVSPPVEFPNGILTPFAWDKTYLLNQNLEITKELNFTSSDTLGPHAFGTNKIPILATEDRICIT NDYRSIIMIDFIGNLICNHPIQSEVIQVLSFDGKHSVVILSCFDEYSEEDQIELFFLDPKGIILLKKILPGPEGLSVSFD GILVFAQNNKIYTLDMFQESDFYLKTI
Sequences:
>Translated_587_residues MVCLYCQNGSKTFSRLEPVQDLNQTPEFPIHDIVGTMRRPFRDIYECLDCHQFWWIRVKGTGDPRSTYPEYYEQTAELLD DQRSELIRNPTVSRLLQHTESQFPYTFFPEVLESIATNERDSLKNIFLDRVPHLPSPAKLWLRSWFQTQFPEEYKVQKEQ GFPNKAKLVSTWESNELVLVSEWIAIDQFVVLSVLDDSYTITAFQLPEKKIIWKQKLGRPFLEGISIPNLFYHSGYLCYY QGFQKGSEYFSKLNRPNELLVFDLSGNLLLHLPLSFRCYEILSTEERDVSENRVVHNFQFSILSNTLYIPYSNEVHIYDL QSKELLQKIKTPNGDPFSGKAFETESGVILFHTVKGVFAVNEKWEVVYQYHSKFHPVFIDSQLNFYYYYSIVDQIQTGEQ KRFFQNDDSGSNLLFELVSPPVEFPNGILTPFAWDKTYLLNQNLEITKELNFTSSDTLGPHAFGTNKIPILATEDRICIT NDYRSIIMIDFIGNLICNHPIQSEVIQVLSFDGKHSVVILSCFDEYSEEDQIELFFLDPKGIILLKKILPGPEGLSVSFD GILVFAQNNKIYTLDMFQESDFYLKTI >Mature_587_residues MVCLYCQNGSKTFSRLEPVQDLNQTPEFPIHDIVGTMRRPFRDIYECLDCHQFWWIRVKGTGDPRSTYPEYYEQTAELLD DQRSELIRNPTVSRLLQHTESQFPYTFFPEVLESIATNERDSLKNIFLDRVPHLPSPAKLWLRSWFQTQFPEEYKVQKEQ GFPNKAKLVSTWESNELVLVSEWIAIDQFVVLSVLDDSYTITAFQLPEKKIIWKQKLGRPFLEGISIPNLFYHSGYLCYY QGFQKGSEYFSKLNRPNELLVFDLSGNLLLHLPLSFRCYEILSTEERDVSENRVVHNFQFSILSNTLYIPYSNEVHIYDL QSKELLQKIKTPNGDPFSGKAFETESGVILFHTVKGVFAVNEKWEVVYQYHSKFHPVFIDSQLNFYYYYSIVDQIQTGEQ KRFFQNDDSGSNLLFELVSPPVEFPNGILTPFAWDKTYLLNQNLEITKELNFTSSDTLGPHAFGTNKIPILATEDRICIT NDYRSIIMIDFIGNLICNHPIQSEVIQVLSFDGKHSVVILSCFDEYSEEDQIELFFLDPKGIILLKKILPGPEGLSVSFD GILVFAQNNKIYTLDMFQESDFYLKTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68367; Mature: 68367
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCLYCQNGSKTFSRLEPVQDLNQTPEFPIHDIVGTMRRPFRDIYECLDCHQFWWIRVKG CEEEEEECCCCHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE TGDPRSTYPEYYEQTAELLDDQRSELIRNPTVSRLLQHTESQFPYTFFPEVLESIATNER CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCH DSLKNIFLDRVPHLPSPAKLWLRSWFQTQFPEEYKVQKEQGFPNKAKLVSTWESNELVLV HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEEEECCCCEEEE SEWIAIDQFVVLSVLDDSYTITAFQLPEKKIIWKQKLGRPFLEGISIPNLFYHSGYLCYY ECHHHHHHEEEEEEECCCEEEEEEECCCHHHHHHHHCCCHHHHHCCCCCCHHHCCEEEEE QGFQKGSEYFSKLNRPNELLVFDLSGNLLLHLPLSFRCYEILSTEERDVSENRVVHNFQF HHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCEEHHHHCCCCCCCCCCCEEEEEEE SILSNTLYIPYSNEVHIYDLQSKELLQKIKTPNGDPFSGKAFETESGVILFHTVKGVFAV EEECCEEEEEECCCEEEEECCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEEECCEEEE NEKWEVVYQYHSKFHPVFIDSQLNFYYYYSIVDQIQTGEQKRFFQNDDSGSNLLFELVSP CCCHHHHEEECCCCCCEEEECCCCEEEEEEEHHHHHCCCHHHHCCCCCCCCCEEEEECCC PVEFPNGILTPFAWDKTYLLNQNLEITKELNFTSSDTLGPHAFGTNKIPILATEDRICIT CCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEE NDYRSIIMIDFIGNLICNHPIQSEVIQVLSFDGKHSVVILSCFDEYSEEDQIELFFLDPK CCCCEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCC GIILLKKILPGPEGLSVSFDGILVFAQNNKIYTLDMFQESDFYLKTI CEEEEEECCCCCCCCEEEECEEEEEEECCEEEEEEEEECCCEEEEEC >Mature Secondary Structure MVCLYCQNGSKTFSRLEPVQDLNQTPEFPIHDIVGTMRRPFRDIYECLDCHQFWWIRVKG CEEEEEECCCCHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE TGDPRSTYPEYYEQTAELLDDQRSELIRNPTVSRLLQHTESQFPYTFFPEVLESIATNER CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCH DSLKNIFLDRVPHLPSPAKLWLRSWFQTQFPEEYKVQKEQGFPNKAKLVSTWESNELVLV HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEEEECCCCEEEE SEWIAIDQFVVLSVLDDSYTITAFQLPEKKIIWKQKLGRPFLEGISIPNLFYHSGYLCYY ECHHHHHHEEEEEEECCCEEEEEEECCCHHHHHHHHCCCHHHHHCCCCCCHHHCCEEEEE QGFQKGSEYFSKLNRPNELLVFDLSGNLLLHLPLSFRCYEILSTEERDVSENRVVHNFQF HHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCEEHHHHCCCCCCCCCCCEEEEEEE SILSNTLYIPYSNEVHIYDLQSKELLQKIKTPNGDPFSGKAFETESGVILFHTVKGVFAV EEECCEEEEEECCCEEEEECCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEEECCEEEE NEKWEVVYQYHSKFHPVFIDSQLNFYYYYSIVDQIQTGEQKRFFQNDDSGSNLLFELVSP CCCHHHHEEECCCCCCEEEECCCCEEEEEEEHHHHHCCCHHHHCCCCCCCCCEEEEECCC PVEFPNGILTPFAWDKTYLLNQNLEITKELNFTSSDTLGPHAFGTNKIPILATEDRICIT CCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEE NDYRSIIMIDFIGNLICNHPIQSEVIQVLSFDGKHSVVILSCFDEYSEEDQIELFFLDPK CCCCEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCC GIILLKKILPGPEGLSVSFDGILVFAQNNKIYTLDMFQESDFYLKTI CEEEEEECCCCCCCCEEEECEEEEEEECCEEEEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA