| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is rsbP [H]
Identifier: 183222691
GI number: 183222691
Start: 3453921
End: 3455942
Strand: Reverse
Name: rsbP [H]
Synonym: LEPBI_I3347
Alternate gene names: 183222691
Gene position: 3455942-3453921 (Counterclockwise)
Preceding gene: 183222692
Following gene: 183222690
Centisome position: 96.01
GC content: 34.77
Gene sequence:
>2022_bases ATGAAAGTTTTGCGTGATTCATTCATCATTGGTTTTCTTTTTGTATTTTGTTTCGAAGTACAAGCTGAATCTGAATCCAT TGATCTAACTTTATTACAAAACAAACCCATCCATTTGTCCCAATCCATGTTAGTTTTGGAAGATCCAACAAACTCATTGG ATTTTCATCGTATCAAATCCATTGAATCCAATCTCCTATTTCAAAAAATTCCAACGGCCAAAGAAGCATTCAATTTTTCT TACTCAAAATCTACTTACTGGCTTAAAGTTTCCATCTCCAATCCAAACCAACATTCGATGGAAACAAACCTCGTTGTTTC GTATCCTCGGCTCAAAACTTTGGACTTGTATTTGGAATCCAAAGAGGGAGTCAAATACGTTCCATCTGGGTATTCTGTCC CTTCTAACAAACGTCCTTACCAATCTCGTTTTTTTGTATTCCCAATCGTGTTTTCAGGGAACTCAAATACAAATGTATAT TTAAAAGTGAACTCACCGAATGCGATCAATCTCCCCGTTCAAATTTGGAAACAAAAATCCTATGATCGACACGAAATCGA TGATCATGTCATTCAAGCGATCTATTTTGGAATCACATTAGCGATGATTGTCTTTAATTTATTTGTATTCTTTATCTTAA AAGACGTCAGTTATTTTTTATACGTATTGGTTGTCATTAGTACATCTGTTGCAATCGCAATTCATAATGGAATCGCTTCG GAGTATTTATGGAATGATTCATCTTGGTTAGATCAGTATGCAATCAATTTAATGATTTCCATAGTTTTGATTCTTTTTTT GATTTTTATGCGGACATTATTACAAACGAAAATAGTTTTACCTAAATTTGAACCTTGGAATTGGTTTTTTGTTTTTTTAC AAATTGGTTTGTCCATTGCTTATATTATTTCTTTCGATACTTTTATCAAAGTTTTTGTTCTAAGTCATACTGTTACATCT TTTTGGATCTTATTGATCGGTATTCTTTGTTCGATAAAAAAACAGAGAATCGCATACTTTTTCCTTTTGGCATTTGCTTT TTTATTTTTAGCACTGATCGTTTCCACACTCAGAGCTCTTGGATACATTCCCACAAATGTATTTACAATAGAAGGACCAC AATATGGTTCTGCCGCCGAAATGATGTTACTCGCTTTTGCACTTGCTGATCGGTACAATACGATCATAAAGGAAAAGGAA ATAGCAGAAAATCGTGTGAAATTAAATTTAGAAAGATCCAATTTGGAACTGGAGGAAAAAGTAAAAGAAAGAACTTCCAA ATTAAACCAAACATTGAGTGTGTTGCGAAGAGACCTTGATGTTGCCAAAAAAATCCAAGAAAATTCCATCTTAATTGATC CTAAATTGAGAAACGCTTTAAAATTGCATTATCGTTATTTACCAGTCACCGAAGTGGGAGGTGATTTTTTTGACATCATT CATTTAAAGGATTCTAGTTACAGAATTTTTATCGCAGATGCGACTGGGCATGGAGTTCATGCGGCGATGATCACAATGGC CATCAAAGGTTTGTATGATCCGATAAAAGAATTTGAACTCCCTCCTCATAAGGTGATCGAAATCTTTAATGAAGAATTTA TGGATAATTTTGTTTCTTTGAATAGCCTTCTCACCGCAATGATCATTGATATTCATACTGAATCGAAAATTATTGAATTT GCCTCTGCGGGCCATCCATCCGCTGTTCTGATCCAAAAAGGGAATCTGAAATTATTGCCAAAGACTGGCCGAATGATTGG GATAAAAAAACAGTCCCATTATGAAAAGATGGAAATCCCATTTGGAACTGGCGACCGTTTGTTTGTTTTCACCGATGGTG CCTATGAAGCCTTTAATCATAATGAAGAAGAATTTGGGGAAGACAAATTACACCAATTATTATTGGAAACAATCCATCTT CCTCTAGTGGAAGTGGAGGATACCCTCTTAAAAACACTACAAAATTTTCAAAACGGTCCCGATCGTCAGGACGACCTAAC GATTCTAAGTTTTGATTTGTGA
Upstream 100 bases:
>100_bases GTTTGAGTGTGAGTTTTGATGGAATCTTGGTCTTTGCTCAAAACAATAAAATCTACACATTGGATATGTTTCAGGAAAGC GATTTTTATCTCAAAACAAT
Downstream 100 bases:
>100_bases CCAAACTTCTATTTTTTTGGAAAAAATACTTTGATATTGAATTATTTTATATCAAAATAATATCCACCTTTGTCTATGTT CTATAAGGACTTTTAAGGAA
Product: putative phosphoserine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MKVLRDSFIIGFLFVFCFEVQAESESIDLTLLQNKPIHLSQSMLVLEDPTNSLDFHRIKSIESNLLFQKIPTAKEAFNFS YSKSTYWLKVSISNPNQHSMETNLVVSYPRLKTLDLYLESKEGVKYVPSGYSVPSNKRPYQSRFFVFPIVFSGNSNTNVY LKVNSPNAINLPVQIWKQKSYDRHEIDDHVIQAIYFGITLAMIVFNLFVFFILKDVSYFLYVLVVISTSVAIAIHNGIAS EYLWNDSSWLDQYAINLMISIVLILFLIFMRTLLQTKIVLPKFEPWNWFFVFLQIGLSIAYIISFDTFIKVFVLSHTVTS FWILLIGILCSIKKQRIAYFFLLAFAFLFLALIVSTLRALGYIPTNVFTIEGPQYGSAAEMMLLAFALADRYNTIIKEKE IAENRVKLNLERSNLELEEKVKERTSKLNQTLSVLRRDLDVAKKIQENSILIDPKLRNALKLHYRYLPVTEVGGDFFDII HLKDSSYRIFIADATGHGVHAAMITMAIKGLYDPIKEFELPPHKVIEIFNEEFMDNFVSLNSLLTAMIIDIHTESKIIEF ASAGHPSAVLIQKGNLKLLPKTGRMIGIKKQSHYEKMEIPFGTGDRLFVFTDGAYEAFNHNEEEFGEDKLHQLLLETIHL PLVEVEDTLLKTLQNFQNGPDRQDDLTILSFDL
Sequences:
>Translated_673_residues MKVLRDSFIIGFLFVFCFEVQAESESIDLTLLQNKPIHLSQSMLVLEDPTNSLDFHRIKSIESNLLFQKIPTAKEAFNFS YSKSTYWLKVSISNPNQHSMETNLVVSYPRLKTLDLYLESKEGVKYVPSGYSVPSNKRPYQSRFFVFPIVFSGNSNTNVY LKVNSPNAINLPVQIWKQKSYDRHEIDDHVIQAIYFGITLAMIVFNLFVFFILKDVSYFLYVLVVISTSVAIAIHNGIAS EYLWNDSSWLDQYAINLMISIVLILFLIFMRTLLQTKIVLPKFEPWNWFFVFLQIGLSIAYIISFDTFIKVFVLSHTVTS FWILLIGILCSIKKQRIAYFFLLAFAFLFLALIVSTLRALGYIPTNVFTIEGPQYGSAAEMMLLAFALADRYNTIIKEKE IAENRVKLNLERSNLELEEKVKERTSKLNQTLSVLRRDLDVAKKIQENSILIDPKLRNALKLHYRYLPVTEVGGDFFDII HLKDSSYRIFIADATGHGVHAAMITMAIKGLYDPIKEFELPPHKVIEIFNEEFMDNFVSLNSLLTAMIIDIHTESKIIEF ASAGHPSAVLIQKGNLKLLPKTGRMIGIKKQSHYEKMEIPFGTGDRLFVFTDGAYEAFNHNEEEFGEDKLHQLLLETIHL PLVEVEDTLLKTLQNFQNGPDRQDDLTILSFDL >Mature_673_residues MKVLRDSFIIGFLFVFCFEVQAESESIDLTLLQNKPIHLSQSMLVLEDPTNSLDFHRIKSIESNLLFQKIPTAKEAFNFS YSKSTYWLKVSISNPNQHSMETNLVVSYPRLKTLDLYLESKEGVKYVPSGYSVPSNKRPYQSRFFVFPIVFSGNSNTNVY LKVNSPNAINLPVQIWKQKSYDRHEIDDHVIQAIYFGITLAMIVFNLFVFFILKDVSYFLYVLVVISTSVAIAIHNGIAS EYLWNDSSWLDQYAINLMISIVLILFLIFMRTLLQTKIVLPKFEPWNWFFVFLQIGLSIAYIISFDTFIKVFVLSHTVTS FWILLIGILCSIKKQRIAYFFLLAFAFLFLALIVSTLRALGYIPTNVFTIEGPQYGSAAEMMLLAFALADRYNTIIKEKE IAENRVKLNLERSNLELEEKVKERTSKLNQTLSVLRRDLDVAKKIQENSILIDPKLRNALKLHYRYLPVTEVGGDFFDII HLKDSSYRIFIADATGHGVHAAMITMAIKGLYDPIKEFELPPHKVIEIFNEEFMDNFVSLNSLLTAMIIDIHTESKIIEF ASAGHPSAVLIQKGNLKLLPKTGRMIGIKKQSHYEKMEIPFGTGDRLFVFTDGAYEAFNHNEEEFGEDKLHQLLLETIHL PLVEVEDTLLKTLQNFQNGPDRQDDLTILSFDL
Specific function: Positive regulator of sigma-B activity. Dephosphorylates rsbV in response to energy stress [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00989 PAS; PF07228 SpoIIE [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 77352; Mature: 77352
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLRDSFIIGFLFVFCFEVQAESESIDLTLLQNKPIHLSQSMLVLEDPTNSLDFHRIKS CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEECCCEEEEECCCCCCCHHHHHH IESNLLFQKIPTAKEAFNFSYSKSTYWLKVSISNPNQHSMETNLVVSYPRLKTLDLYLES HHHHHHHHHCCCHHHHCCCEECCCEEEEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEC KEGVKYVPSGYSVPSNKRPYQSRFFVFPIVFSGNSNTNVYLKVNSPNAINLPVQIWKQKS CCCCEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCEEECCHHHHCCCC YDRHEIDDHVIQAIYFGITLAMIVFNLFVFFILKDVSYFLYVLVVISTSVAIAIHNGIAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHH EYLWNDSSWLDQYAINLMISIVLILFLIFMRTLLQTKIVLPKFEPWNWFFVFLQIGLSIA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH YIISFDTFIKVFVLSHTVTSFWILLIGILCSIKKQRIAYFFLLAFAFLFLALIVSTLRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYIPTNVFTIEGPQYGSAAEMMLLAFALADRYNTIIKEKEIAENRVKLNLERSNLELEEK CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH VKERTSKLNQTLSVLRRDLDVAKKIQENSILIDPKLRNALKLHYRYLPVTEVGGDFFDII HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHEEEEEHHHCCCCEEEEE HLKDSSYRIFIADATGHGVHAAMITMAIKGLYDPIKEFELPPHKVIEIFNEEFMDNFVSL EEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH NSLLTAMIIDIHTESKIIEFASAGHPSAVLIQKGNLKLLPKTGRMIGIKKQSHYEKMEIP HHHHHHHHHEECCCHHHHHHHCCCCCCEEEEECCCEEEEECCCCEEEEECCCCCCEEECC FGTGDRLFVFTDGAYEAFNHNEEEFGEDKLHQLLLETIHLPLVEVEDTLLKTLQNFQNGP CCCCCEEEEEECCCHHHHCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC DRQDDLTILSFDL CCCCCEEEEEECC >Mature Secondary Structure MKVLRDSFIIGFLFVFCFEVQAESESIDLTLLQNKPIHLSQSMLVLEDPTNSLDFHRIKS CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEECCCEEEEECCCCCCCHHHHHH IESNLLFQKIPTAKEAFNFSYSKSTYWLKVSISNPNQHSMETNLVVSYPRLKTLDLYLES HHHHHHHHHCCCHHHHCCCEECCCEEEEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEC KEGVKYVPSGYSVPSNKRPYQSRFFVFPIVFSGNSNTNVYLKVNSPNAINLPVQIWKQKS CCCCEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCEEECCHHHHCCCC YDRHEIDDHVIQAIYFGITLAMIVFNLFVFFILKDVSYFLYVLVVISTSVAIAIHNGIAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHH EYLWNDSSWLDQYAINLMISIVLILFLIFMRTLLQTKIVLPKFEPWNWFFVFLQIGLSIA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH YIISFDTFIKVFVLSHTVTSFWILLIGILCSIKKQRIAYFFLLAFAFLFLALIVSTLRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYIPTNVFTIEGPQYGSAAEMMLLAFALADRYNTIIKEKEIAENRVKLNLERSNLELEEK CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH VKERTSKLNQTLSVLRRDLDVAKKIQENSILIDPKLRNALKLHYRYLPVTEVGGDFFDII HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHEEEEEHHHCCCCEEEEE HLKDSSYRIFIADATGHGVHAAMITMAIKGLYDPIKEFELPPHKVIEIFNEEFMDNFVSL EEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH NSLLTAMIIDIHTESKIIEFASAGHPSAVLIQKGNLKLLPKTGRMIGIKKQSHYEKMEIP HHHHHHHHHEECCCHHHHHHHCCCCCCEEEEECCCEEEEECCCCEEEEECCCCCCEEECC FGTGDRLFVFTDGAYEAFNHNEEEFGEDKLHQLLLETIHLPLVEVEDTLLKTLQNFQNGP CCCCCEEEEEECCCHHHHCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC DRQDDLTILSFDL CCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 10632888 [H]