| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222602
Identifier: 183222602
GI number: 183222602
Start: 3371296
End: 3372225
Strand: Reverse
Name: 183222602
Synonym: LEPBI_I3257
Alternate gene names: NA
Gene position: 3372225-3371296 (Counterclockwise)
Preceding gene: 183222603
Following gene: 183222599
Centisome position: 93.68
GC content: 40.32
Gene sequence:
>930_bases ATGGGCGTCCGTGAACAAGTTTTACAAACATTAGTCAAAATATTTCCTACTTACGACGCCTCACTTGCGATTGCAGGTGG AGGTTGTAAGGCGTTTTATGCACTGGGTGTAGGGAAAACTCTGAGAGAGTGGGGAGTGCGATTCACGGAGTTATCTGGTG TGTCTGCTGGTGCTGCGATGGCTCTTTGTATTTTGTCCCAAACAGAGGAAGAATCCGTTGAATACTTCGAAGAAATCACC AAACGGAATTCTAGAAATTTTCATTTTTCAAATTTGTTACGTGGGGAGTCCACATTTCCACACGAGGATATGTATCGACG AACCATTCGTTTCGGAATGCGTTTTGATCGAGTTTTAGAATCGGGTGCCAAAATTTGGATCCATTCTGTGAAAGCACATC CAAAAGAAGATTCTTTAAAAAACAAATTTCGATTGGCTCGTTTGATTTCAGAAACTGGCCGGGCCTTTATATTAGATGAC AGGGACCGCTCAGAAGGAATCCCAGCCAACCGCATCGCAGAAATCATCAAAAAGTGGAATATGGAAGATGTAGACTTTAC AGAAAAGGATTTTGTAAATTCAGAAACCATTGAGCAATTCATTTTGAATTCTTCTTCCATTCCTCCCATCGTTGACTTTC AATCCGTTGGCAACGAATACTACTTAGATGGAGGACTCACAAACAATATGATGATCGAAACCTTCTCTCCGAAGGCAAAA ATCATAGGAATTCATTACGAACCAAATACAATTGTAGGAAAAGATCCCGATTTACTAGCAAGGTCGTTTTTAATCACACC TTCCAAACCTCTTCCCATCACTTCCTTCGATTACACCAATCCCAAAGGTGTTAGAGAAACATTTGAATTAGGGAAAGCGG ACGCATTGGCAAAAAAATCAGAGATCATCAATTATTTAAAAAAGAACTGA
Upstream 100 bases:
>100_bases CGGAAGAAGATTGTCGTGCAAGTTTGTATTTTGACAGGTTTCTGGGAGAAAACAATACACTATGCTTTCGTTGGGAAGGG GATTAGAATTAGCCGAATTT
Downstream 100 bases:
>100_bases AGTAAGTTGAGTCCTTTTTCTAAGGTTTCTTCTTCTGTGATTAAACTAATTACAAGAATACACCTGTTATGCGAAAATCC GTACCAAGTTCCTGGGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MGVREQVLQTLVKIFPTYDASLAIAGGGCKAFYALGVGKTLREWGVRFTELSGVSAGAAMALCILSQTEEESVEYFEEIT KRNSRNFHFSNLLRGESTFPHEDMYRRTIRFGMRFDRVLESGAKIWIHSVKAHPKEDSLKNKFRLARLISETGRAFILDD RDRSEGIPANRIAEIIKKWNMEDVDFTEKDFVNSETIEQFILNSSSIPPIVDFQSVGNEYYLDGGLTNNMMIETFSPKAK IIGIHYEPNTIVGKDPDLLARSFLITPSKPLPITSFDYTNPKGVRETFELGKADALAKKSEIINYLKKN
Sequences:
>Translated_309_residues MGVREQVLQTLVKIFPTYDASLAIAGGGCKAFYALGVGKTLREWGVRFTELSGVSAGAAMALCILSQTEEESVEYFEEIT KRNSRNFHFSNLLRGESTFPHEDMYRRTIRFGMRFDRVLESGAKIWIHSVKAHPKEDSLKNKFRLARLISETGRAFILDD RDRSEGIPANRIAEIIKKWNMEDVDFTEKDFVNSETIEQFILNSSSIPPIVDFQSVGNEYYLDGGLTNNMMIETFSPKAK IIGIHYEPNTIVGKDPDLLARSFLITPSKPLPITSFDYTNPKGVRETFELGKADALAKKSEIINYLKKN >Mature_308_residues GVREQVLQTLVKIFPTYDASLAIAGGGCKAFYALGVGKTLREWGVRFTELSGVSAGAAMALCILSQTEEESVEYFEEITK RNSRNFHFSNLLRGESTFPHEDMYRRTIRFGMRFDRVLESGAKIWIHSVKAHPKEDSLKNKFRLARLISETGRAFILDDR DRSEGIPANRIAEIIKKWNMEDVDFTEKDFVNSETIEQFILNSSSIPPIVDFQSVGNEYYLDGGLTNNMMIETFSPKAKI IGIHYEPNTIVGKDPDLLARSFLITPSKPLPITSFDYTNPKGVRETFELGKADALAKKSEIINYLKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34953; Mature: 34822
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVREQVLQTLVKIFPTYDASLAIAGGGCKAFYALGVGKTLREWGVRFTELSGVSAGAAM CCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCHHHHHHCCEEEEECCCCHHHHH ALCILSQTEEESVEYFEEITKRNSRNFHFSNLLRGESTFPHEDMYRRTIRFGMRFDRVLE HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH SGAKIWIHSVKAHPKEDSLKNKFRLARLISETGRAFILDDRDRSEGIPANRIAEIIKKWN CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCC MEDVDFTEKDFVNSETIEQFILNSSSIPPIVDFQSVGNEYYLDGGLTNNMMIETFSPKAK CCCCCCCHHHHCCHHHHHHHHHCCCCCCCEEEHHHCCCEEEECCCCCCCEEEEEECCCEE IIGIHYEPNTIVGKDPDLLARSFLITPSKPLPITSFDYTNPKGVRETFELGKADALAKKS EEEEEECCCEECCCCHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH EIINYLKKN HHHHHHHCC >Mature Secondary Structure GVREQVLQTLVKIFPTYDASLAIAGGGCKAFYALGVGKTLREWGVRFTELSGVSAGAAM CHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCHHHHHHCCEEEEECCCCHHHHH ALCILSQTEEESVEYFEEITKRNSRNFHFSNLLRGESTFPHEDMYRRTIRFGMRFDRVLE HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH SGAKIWIHSVKAHPKEDSLKNKFRLARLISETGRAFILDDRDRSEGIPANRIAEIIKKWN CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCC MEDVDFTEKDFVNSETIEQFILNSSSIPPIVDFQSVGNEYYLDGGLTNNMMIETFSPKAK CCCCCCCHHHHCCHHHHHHHHHCCCCCCCEEEHHHCCCEEEECCCCCCCEEEEEECCCEE IIGIHYEPNTIVGKDPDLLARSFLITPSKPLPITSFDYTNPKGVRETFELGKADALAKKS EEEEEECCCEECCCCHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH EIINYLKKN HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA