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The map label for this gene is ddpX [H]

Identifier: 183222515

GI number: 183222515

Start: 3282821

End: 3283570

Strand: Reverse

Name: ddpX [H]

Synonym: LEPBI_I3170

Alternate gene names: 183222515

Gene position: 3283570-3282821 (Counterclockwise)

Preceding gene: 183222516

Following gene: 183222514

Centisome position: 91.22

GC content: 38.93

Gene sequence:

>750_bases
ATGCGAAACTTGAATCGAATATGGATCCACATTGGATTTGATGCCTTGCGATCTGCATTCAATTTAATTTTACTTGTGGT
TATTTCGATCTTTCTTTCAACACCTTTTGGGGCTGAAGACTCAAAACTGATTGTGTTTGACAAAACCGCATACCTCCAAT
CCATCAAAAAAGATCCCAACCGAGTTCTCATTGACTTAGAATCCATTCCAGAGATTGTTTTGGACATCAGATATGCCTCA
GAAAATAACTTCACAGGCCAAGTGATCTACAACCGAGGAAAAGCGTTTGCGAGAAAACGTGTGGCGGAAGCCCTCCGCAA
TGCCCAAATCGAATTTTTAAAACAAGGGCATTCCATTCAAATTTATGATGCCTATAGGCCGTACCAAGCGACTGTCAAAT
TTTATGAAATCATAAAAGACACTCGTTATGTAGCCTCTCCCAAAACGGGGTCAAGGCATAACAAAGGTTGTGCGATTGAT
TTAACCTTGGTAGATAAAAATACAAAACAATCATTACAAATGCCAACTAAATACGATTCCTTTGAAAAAGCAGCTTGGGC
AAATGCTCCCGTTTCTGATCCAGTGACCAAACAAAACAGAGACAAACTCATTGAAGGGATGAGCCGATTTGGATTTCGAG
TCAACAAAACGGAATGGTGGCATTTTGATTTTTTGGATTGTTCTGGGTATGAAGTATTGGACATTCCATTTGAAGAATTA
GAAGATGATGATCTTAGGAAATACAAATGA

Upstream 100 bases:

>100_bases
TGATAGAAGACCAATTGGTAACAGAAAATACCGCATGGATGATGTATGAACCATTATTGGAATCAAACCCCCAAAAATAA
AAAAACAAGGAACAACTGTA

Downstream 100 bases:

>100_bases
AGAAACAAATTTTACTTTTTTTATCTCTGGTTGTATCAGGATCTCTTTTGGCACAGACCAAAGGATTCATTTCATTTGAA
GAAAATGGCTTGTACGGTTT

Product: putative D-alanyl-D-alanine dipeptidase VanX

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRNLNRIWIHIGFDALRSAFNLILLVVISIFLSTPFGAEDSKLIVFDKTAYLQSIKKDPNRVLIDLESIPEIVLDIRYAS
ENNFTGQVIYNRGKAFARKRVAEALRNAQIEFLKQGHSIQIYDAYRPYQATVKFYEIIKDTRYVASPKTGSRHNKGCAID
LTLVDKNTKQSLQMPTKYDSFEKAAWANAPVSDPVTKQNRDKLIEGMSRFGFRVNKTEWWHFDFLDCSGYEVLDIPFEEL
EDDDLRKYK

Sequences:

>Translated_249_residues
MRNLNRIWIHIGFDALRSAFNLILLVVISIFLSTPFGAEDSKLIVFDKTAYLQSIKKDPNRVLIDLESIPEIVLDIRYAS
ENNFTGQVIYNRGKAFARKRVAEALRNAQIEFLKQGHSIQIYDAYRPYQATVKFYEIIKDTRYVASPKTGSRHNKGCAID
LTLVDKNTKQSLQMPTKYDSFEKAAWANAPVSDPVTKQNRDKLIEGMSRFGFRVNKTEWWHFDFLDCSGYEVLDIPFEEL
EDDDLRKYK
>Mature_249_residues
MRNLNRIWIHIGFDALRSAFNLILLVVISIFLSTPFGAEDSKLIVFDKTAYLQSIKKDPNRVLIDLESIPEIVLDIRYAS
ENNFTGQVIYNRGKAFARKRVAEALRNAQIEFLKQGHSIQIYDAYRPYQATVKFYEIIKDTRYVASPKTGSRHNKGCAID
LTLVDKNTKQSLQMPTKYDSFEKAAWANAPVSDPVTKQNRDKLIEGMSRFGFRVNKTEWWHFDFLDCSGYEVLDIPFEEL
EDDDLRKYK

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

Organism=Escherichia coli, GI1787763, Length=172, Percent_Identity=33.7209302325581, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 28890; Mature: 28890

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLNRIWIHIGFDALRSAFNLILLVVISIFLSTPFGAEDSKLIVFDKTAYLQSIKKDPN
CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHCCCC
RVLIDLESIPEIVLDIRYASENNFTGQVIYNRGKAFARKRVAEALRNAQIEFLKQGHSIQ
EEEEEHHHCCCEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEE
IYDAYRPYQATVKFYEIIKDTRYVASPKTGSRHNKGCAIDLTLVDKNTKQSLQMPTKYDS
EEECCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCC
FEKAAWANAPVSDPVTKQNRDKLIEGMSRFGFRVNKTEWWHFDFLDCSGYEVLDIPFEEL
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCEEECCCEEEEEEEECCCCCEEEECCHHHC
EDDDLRKYK
CCCHHHCCC
>Mature Secondary Structure
MRNLNRIWIHIGFDALRSAFNLILLVVISIFLSTPFGAEDSKLIVFDKTAYLQSIKKDPN
CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHCCCC
RVLIDLESIPEIVLDIRYASENNFTGQVIYNRGKAFARKRVAEALRNAQIEFLKQGHSIQ
EEEEEHHHCCCEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEE
IYDAYRPYQATVKFYEIIKDTRYVASPKTGSRHNKGCAIDLTLVDKNTKQSLQMPTKYDS
EEECCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCC
FEKAAWANAPVSDPVTKQNRDKLIEGMSRFGFRVNKTEWWHFDFLDCSGYEVLDIPFEEL
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCEEECCCEEEEEEEECCCCCEEEECCHHHC
EDDDLRKYK
CCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]