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The map label for this gene is vanW [H]

Identifier: 183222516

GI number: 183222516

Start: 3283591

End: 3284457

Strand: Reverse

Name: vanW [H]

Synonym: LEPBI_I3171

Alternate gene names: 183222516

Gene position: 3284457-3283591 (Counterclockwise)

Preceding gene: 183222517

Following gene: 183222515

Centisome position: 91.24

GC content: 38.75

Gene sequence:

>867_bases
ATGGGATTTAAGATACGTAAACACAAATCAGATCTTTTTCCAAAGAAGGTCCACAGGAGTGAACTTCGCCTTTTTTTTGG
GAAACTTTATTTTCAATGGAAACGGACCTTGATCTGGTTAAAAGAACGAAAGTCCTTTGCTCGAACCATCATGGATCCAT
CCTCAATCAAAGAGGAATATCCAATTTCGATTTTTATACACCAATCTCCCATTTACCGTAAGTTAAAAGATGTTCCGATG
TATCTACAAGAAAACAAAAAGGTGAATTTGGAGATCGCCTTACAAAAAATAGATGGAATTCTTTTGGAACCGAACCAAGT
GTTTTCTTTTTGGTATCTTGTCGGAAAACCTACCAAACGAAAGGGGTATCTACCTGGGATGCAATTGAAAAATGGTGGAT
TTATAGAAAGTACGGGGGGTGGTCTTTGCCAAATGGCAAATTTAATTTATTGGATGACCTTACACACCCCTCTCACTGTG
AAAGAAAGATGGCGTCATAGTTTTGATATCTTTCCTGATTCGAATCGCACACTTCCCTTTGGATCGGGGGCCACCTTATC
CTATAACTACATCGACCTACAAATCCAAAACACAACCAAACAACCGTTTGTTTTACGTATATGGATCGAAGATGGAAATT
TATGCGGGGAATGGAGGAGTGATCGGGACATTCCTTATTTGTATTCTGTTTACGAATCTTACCATGCCTTTCATGCAGAA
CCTTGGGGTGGATACACAAGACGGAATACCATTCGTCGGAAGGTAATCTTAAAAACCACAAAAGAATTGATAGAAGACCA
ATTGGTAACAGAAAATACCGCATGGATGATGTATGAACCATTATTGGAATCAAACCCCCAAAAATAA

Upstream 100 bases:

>100_bases
ATGTGGTTGGAGAAACGTAATTCAAAACTTTTAGGTGTTGCCAAGTCTTGGAAAAATCCATATCGTAAACGTCCAGGTTT
CCTCCAAAGAAAACAACAAT

Downstream 100 bases:

>100_bases
AAAAACAAGGAACAACTGTAATGCGAAACTTGAATCGAATATGGATCCACATTGGATTTGATGCCTTGCGATCTGCATTC
AATTTAATTTTACTTGTGGT

Product: putative vancomycin B-type resistance protein VanW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MGFKIRKHKSDLFPKKVHRSELRLFFGKLYFQWKRTLIWLKERKSFARTIMDPSSIKEEYPISIFIHQSPIYRKLKDVPM
YLQENKKVNLEIALQKIDGILLEPNQVFSFWYLVGKPTKRKGYLPGMQLKNGGFIESTGGGLCQMANLIYWMTLHTPLTV
KERWRHSFDIFPDSNRTLPFGSGATLSYNYIDLQIQNTTKQPFVLRIWIEDGNLCGEWRSDRDIPYLYSVYESYHAFHAE
PWGGYTRRNTIRRKVILKTTKELIEDQLVTENTAWMMYEPLLESNPQK

Sequences:

>Translated_288_residues
MGFKIRKHKSDLFPKKVHRSELRLFFGKLYFQWKRTLIWLKERKSFARTIMDPSSIKEEYPISIFIHQSPIYRKLKDVPM
YLQENKKVNLEIALQKIDGILLEPNQVFSFWYLVGKPTKRKGYLPGMQLKNGGFIESTGGGLCQMANLIYWMTLHTPLTV
KERWRHSFDIFPDSNRTLPFGSGATLSYNYIDLQIQNTTKQPFVLRIWIEDGNLCGEWRSDRDIPYLYSVYESYHAFHAE
PWGGYTRRNTIRRKVILKTTKELIEDQLVTENTAWMMYEPLLESNPQK
>Mature_287_residues
GFKIRKHKSDLFPKKVHRSELRLFFGKLYFQWKRTLIWLKERKSFARTIMDPSSIKEEYPISIFIHQSPIYRKLKDVPMY
LQENKKVNLEIALQKIDGILLEPNQVFSFWYLVGKPTKRKGYLPGMQLKNGGFIESTGGGLCQMANLIYWMTLHTPLTVK
ERWRHSFDIFPDSNRTLPFGSGATLSYNYIDLQIQNTTKQPFVLRIWIEDGNLCGEWRSDRDIPYLYSVYESYHAFHAEP
WGGYTRRNTIRRKVILKTTKELIEDQLVTENTAWMMYEPLLESNPQK

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007391 [H]

Pfam domain/function: PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 34174; Mature: 34043

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFKIRKHKSDLFPKKVHRSELRLFFGKLYFQWKRTLIWLKERKSFARTIMDPSSIKEEY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
PISIFIHQSPIYRKLKDVPMYLQENKKVNLEIALQKIDGILLEPNQVFSFWYLVGKPTKR
CEEEEEECCHHHHHHHCCCCEECCCCEEEEEEEEEECCCEEECCHHEEEEEEEECCCCCC
KGYLPGMQLKNGGFIESTGGGLCQMANLIYWMTLHTPLTVKERWRHSFDIFPDSNRTLPF
CCCCCCCEECCCCEEECCCCCHHHHHHHEEEEEECCCCCHHHHCCCCCCCCCCCCCEEEC
GSGATLSYNYIDLQIQNTTKQPFVLRIWIEDGNLCGEWRSDRDIPYLYSVYESYHAFHAE
CCCCEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PWGGYTRRNTIRRKVILKTTKELIEDQLVTENTAWMMYEPLLESNPQK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCC
>Mature Secondary Structure 
GFKIRKHKSDLFPKKVHRSELRLFFGKLYFQWKRTLIWLKERKSFARTIMDPSSIKEEY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
PISIFIHQSPIYRKLKDVPMYLQENKKVNLEIALQKIDGILLEPNQVFSFWYLVGKPTKR
CEEEEEECCHHHHHHHCCCCEECCCCEEEEEEEEEECCCEEECCHHEEEEEEEECCCCCC
KGYLPGMQLKNGGFIESTGGGLCQMANLIYWMTLHTPLTVKERWRHSFDIFPDSNRTLPF
CCCCCCCEECCCCEEECCCCCHHHHHHHEEEEEECCCCCHHHHCCCCCCCCCCCCCEEEC
GSGATLSYNYIDLQIQNTTKQPFVLRIWIEDGNLCGEWRSDRDIPYLYSVYESYHAFHAE
CCCCEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PWGGYTRRNTIRRKVILKTTKELIEDQLVTENTAWMMYEPLLESNPQK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631706; 12663927 [H]