| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222465
Identifier: 183222465
GI number: 183222465
Start: 3232941
End: 3233846
Strand: Reverse
Name: 183222465
Synonym: LEPBI_I3119
Alternate gene names: NA
Gene position: 3233846-3232941 (Counterclockwise)
Preceding gene: 183222466
Following gene: 183222464
Centisome position: 89.84
GC content: 42.72
Gene sequence:
>906_bases TTGAAATCGTTTCCCATTTCCTTTCTAACGCTCCTGTTCCTTTTCGCAGGAGCATTCTCTCAGTGCACCTTTGGATCGGT TGGAAACAGTGAAGAAGAACAACTCGTCATTCTCCAGAATTTGATTTTTTTCAATAACAACCAAACCATTGCGGTTGGAA CCAATGTAAGAAGTTATGATGACCAAGCGGATGACAATATAAATCAGTTCAGTTTGACAAGTAATGGGAATCCATACAAC ATCACGGTTCAATCTGACTCCTACATCCATTGGGAAACAGGAACGTATCGGATCAATCCACCGAACCAGGTGTTAGGTGT ATCGACGACTGGCTCGGAAAGGAGTACTGCAGTAGCGAAAACTCATACTCCTTTTACGGTTCCATTGGATTTGCCAGCGG ATGATCTGTATGGAAAGTCTTATCCATTTCTTGCGACCTCGGTTGTCTCAAACATCACTCAGTTCAATGACACGATGGAA ACGGGAGCCAGTTTTTTGTATCCCAATACGCGGTCGGCTAGTTTGCCTTTGGGAGTCGTTGCAATCGCCAATGTGAGTTG GGAGGAGATTTACATTCGGATGGATGTGACTAGAGCACCAAATACAAAAACAGTTACCATTCTATTACCCCAAGGGAATA AACAGATCACTCCTAAGTGTAAGATACCTATCAAAAATGGTCGGAGTGGAAACATTGAGATTTTAGTTTCCTTGTCATCT CTCTTCCAAGACAGGACAGTATCTGGAACACCGATACGATTTCTTGATCAATTGCCGATTGGAACTGATCCTGTCGTGAT CTCCAAAGTATCCAATGTGAATTTATACAATATCCTCCAACAGAACCTCCAAGCAGAAGACATCACTTTTAGTTTCCCTG GTTGTTTTCCAGGAGTGGAACGATGA
Upstream 100 bases:
>100_bases CGTTCACGATCACAAATTCTCAGAGGGATGATATGGTAAACTTCCTACTCACCCTCACCGACGATGAATTCCTAACCAAC CCAAAATTTGCGAGTCCATT
Downstream 100 bases:
>100_bases AAGAATTGAAACAAAAAACAAAACGCAGGAATTTCATTTTTTCATTTATTCTCATTTTGGTTTTATTTTGGAATTTCTCA ATACATTCGCATCACACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKSFPISFLTLLFLFAGAFSQCTFGSVGNSEEEQLVILQNLIFFNNNQTIAVGTNVRSYDDQADDNINQFSLTSNGNPYN ITVQSDSYIHWETGTYRINPPNQVLGVSTTGSERSTAVAKTHTPFTVPLDLPADDLYGKSYPFLATSVVSNITQFNDTME TGASFLYPNTRSASLPLGVVAIANVSWEEIYIRMDVTRAPNTKTVTILLPQGNKQITPKCKIPIKNGRSGNIEILVSLSS LFQDRTVSGTPIRFLDQLPIGTDPVVISKVSNVNLYNILQQNLQAEDITFSFPGCFPGVER
Sequences:
>Translated_301_residues MKSFPISFLTLLFLFAGAFSQCTFGSVGNSEEEQLVILQNLIFFNNNQTIAVGTNVRSYDDQADDNINQFSLTSNGNPYN ITVQSDSYIHWETGTYRINPPNQVLGVSTTGSERSTAVAKTHTPFTVPLDLPADDLYGKSYPFLATSVVSNITQFNDTME TGASFLYPNTRSASLPLGVVAIANVSWEEIYIRMDVTRAPNTKTVTILLPQGNKQITPKCKIPIKNGRSGNIEILVSLSS LFQDRTVSGTPIRFLDQLPIGTDPVVISKVSNVNLYNILQQNLQAEDITFSFPGCFPGVER >Mature_301_residues MKSFPISFLTLLFLFAGAFSQCTFGSVGNSEEEQLVILQNLIFFNNNQTIAVGTNVRSYDDQADDNINQFSLTSNGNPYN ITVQSDSYIHWETGTYRINPPNQVLGVSTTGSERSTAVAKTHTPFTVPLDLPADDLYGKSYPFLATSVVSNITQFNDTME TGASFLYPNTRSASLPLGVVAIANVSWEEIYIRMDVTRAPNTKTVTILLPQGNKQITPKCKIPIKNGRSGNIEILVSLSS LFQDRTVSGTPIRFLDQLPIGTDPVVISKVSNVNLYNILQQNLQAEDITFSFPGCFPGVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33097; Mature: 33097
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFPISFLTLLFLFAGAFSQCTFGSVGNSEEEQLVILQNLIFFNNNQTIAVGTNVRSYD CCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCC DQADDNINQFSLTSNGNPYNITVQSDSYIHWETGTYRINPPNQVLGVSTTGSERSTAVAK CCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCEEEECCCCCEEEEECCCCCCCEEEEE THTPFTVPLDLPADDLYGKSYPFLATSVVSNITQFNDTMETGASFLYPNTRSASLPLGVV CCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEE AIANVSWEEIYIRMDVTRAPNTKTVTILLPQGNKQITPKCKIPIKNGRSGNIEILVSLSS EEECCCEEEEEEEEEEECCCCCEEEEEEEECCCCEECCEEEEEECCCCCCCEEEEEEEHH LFQDRTVSGTPIRFLDQLPIGTDPVVISKVSNVNLYNILQQNLQAEDITFSFPGCFPGVE HHCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEEECCCCCCCCC R C >Mature Secondary Structure MKSFPISFLTLLFLFAGAFSQCTFGSVGNSEEEQLVILQNLIFFNNNQTIAVGTNVRSYD CCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCC DQADDNINQFSLTSNGNPYNITVQSDSYIHWETGTYRINPPNQVLGVSTTGSERSTAVAK CCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCEEEECCCCCEEEEECCCCCCCEEEEE THTPFTVPLDLPADDLYGKSYPFLATSVVSNITQFNDTMETGASFLYPNTRSASLPLGVV CCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEE AIANVSWEEIYIRMDVTRAPNTKTVTILLPQGNKQITPKCKIPIKNGRSGNIEILVSLSS EEECCCEEEEEEEEEEECCCCCEEEEEEEECCCCEECCEEEEEECCCCCCCEEEEEEEHH LFQDRTVSGTPIRFLDQLPIGTDPVVISKVSNVNLYNILQQNLQAEDITFSFPGCFPGVE HHCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEEECCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA