| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222464
Identifier: 183222464
GI number: 183222464
Start: 3232000
End: 3232944
Strand: Reverse
Name: 183222464
Synonym: LEPBI_I3118
Alternate gene names: NA
Gene position: 3232944-3232000 (Counterclockwise)
Preceding gene: 183222465
Following gene: 183222463
Centisome position: 89.81
GC content: 39.68
Gene sequence:
>945_bases ATGAAAGAATTGAAACAAAAAACAAAACGCAGGAATTTCATTTTTTCATTTATTCTCATTTTGGTTTTATTTTGGAATTT CTCAATACATTCGCATCACACGGGTTCGTCGGACAGTCCGAATGCGACTGCCAGGTTTGTGGATCCATTTACGGGCAAAC GAGAAAAACCAACCAATTATTTGGTGATGACCCAAGACTATTACCAATCCACAAGAGAGAATAGCCATCTCTTCACAACC ACTGCGTTTGCGGAATTGAATTTTTTTGATGGAAGGTTTGCACTCAATGCTTCTGTTCCGTGGAATTATTACCAACAACG TGGTAGAGAAGATGCAGCGAGGATTGGGAAAACCTATTTAGGTTTTAAGTACCAACCATTCTTTGATTTGGACAAACCTT ACTTTTTTGTGATCGAAGGGGCGGTTGGTTTTCCAAGTGGTCCCGATACGGATCGGTTCACTGGAGGAAATTATTATACA GGATCTGGATTTATTAAACTCGGATACTTATATGAAAGATGGTCTTTTGTGACAAAGATCGGAGGACTCAATCCTCTCTC TAGACCACAGCCGAATAACTTACAAGATAACGATGGAATTCCTTTTTATTTTCGAAAACCTTCGGCCACTCCACCAGAAC CCGAATACGAATTCAAAAAAACGACACTCATTTCGGCGTATGTGACGTATTATTTGATGCCAGAGATTTCCGTATTCACA GGAGTTTTGTATCGAAATCCGTATAATGGAGTCGATTATTCTAAAGAAAAAGACAAAGCGAATCCATCGTATTTTACTGA GGCGAGTGTTGGATTTTCTTGGAATTTTTCTGAAAAATACAACATGAGTTTAGCATATCGTTATCCGTTGCAACGTGACC GAGAATACAGGTTATACCAGTCTGCTTGGACATTTGCCTTCTCGATGGAGTGGGGAAGCGATTGA
Upstream 100 bases:
>100_bases CCAAAGTATCCAATGTGAATTTATACAATATCCTCCAACAGAACCTCCAAGCAGAAGACATCACTTTTAGTTTCCCTGGT TGTTTTCCAGGAGTGGAACG
Downstream 100 bases:
>100_bases CATTTCATGCCTTTTTTAAAACGTTCTAAGAAACTGTATAAATCTTAATCGTAAAAGGTAATCTATGAGCAACGTAGAAA TCGTACCAGTAGGGGAACTA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKELKQKTKRRNFIFSFILILVLFWNFSIHSHHTGSSDSPNATARFVDPFTGKREKPTNYLVMTQDYYQSTRENSHLFTT TAFAELNFFDGRFALNASVPWNYYQQRGREDAARIGKTYLGFKYQPFFDLDKPYFFVIEGAVGFPSGPDTDRFTGGNYYT GSGFIKLGYLYERWSFVTKIGGLNPLSRPQPNNLQDNDGIPFYFRKPSATPPEPEYEFKKTTLISAYVTYYLMPEISVFT GVLYRNPYNGVDYSKEKDKANPSYFTEASVGFSWNFSEKYNMSLAYRYPLQRDREYRLYQSAWTFAFSMEWGSD
Sequences:
>Translated_314_residues MKELKQKTKRRNFIFSFILILVLFWNFSIHSHHTGSSDSPNATARFVDPFTGKREKPTNYLVMTQDYYQSTRENSHLFTT TAFAELNFFDGRFALNASVPWNYYQQRGREDAARIGKTYLGFKYQPFFDLDKPYFFVIEGAVGFPSGPDTDRFTGGNYYT GSGFIKLGYLYERWSFVTKIGGLNPLSRPQPNNLQDNDGIPFYFRKPSATPPEPEYEFKKTTLISAYVTYYLMPEISVFT GVLYRNPYNGVDYSKEKDKANPSYFTEASVGFSWNFSEKYNMSLAYRYPLQRDREYRLYQSAWTFAFSMEWGSD >Mature_314_residues MKELKQKTKRRNFIFSFILILVLFWNFSIHSHHTGSSDSPNATARFVDPFTGKREKPTNYLVMTQDYYQSTRENSHLFTT TAFAELNFFDGRFALNASVPWNYYQQRGREDAARIGKTYLGFKYQPFFDLDKPYFFVIEGAVGFPSGPDTDRFTGGNYYT GSGFIKLGYLYERWSFVTKIGGLNPLSRPQPNNLQDNDGIPFYFRKPSATPPEPEYEFKKTTLISAYVTYYLMPEISVFT GVLYRNPYNGVDYSKEKDKANPSYFTEASVGFSWNFSEKYNMSLAYRYPLQRDREYRLYQSAWTFAFSMEWGSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36733; Mature: 36733
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELKQKTKRRNFIFSFILILVLFWNFSIHSHHTGSSDSPNATARFVDPFTGKREKPTNY CCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCE LVMTQDYYQSTRENSHLFTTTAFAELNFFDGRFALNASVPWNYYQQRGREDAARIGKTYL EEEEHHHHHHHCCCCEEEEEEEEEEEEEECCEEEEECCCCHHHHHHCCCHHHHHHHHHHH GFKYQPFFDLDKPYFFVIEGAVGFPSGPDTDRFTGGNYYTGSGFIKLGYLYERWSFVTKI CEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEECHHHHHHHHHHHH GGLNPLSRPQPNNLQDNDGIPFYFRKPSATPPEPEYEFKKTTLISAYVTYYLMPEISVFT CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH GVLYRNPYNGVDYSKEKDKANPSYFTEASVGFSWNFSEKYNMSLAYRYPLQRDREYRLYQ HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCEEEEECCCCCCCCHHEEH SAWTFAFSMEWGSD EEEEEEEEECCCCC >Mature Secondary Structure MKELKQKTKRRNFIFSFILILVLFWNFSIHSHHTGSSDSPNATARFVDPFTGKREKPTNY CCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCE LVMTQDYYQSTRENSHLFTTTAFAELNFFDGRFALNASVPWNYYQQRGREDAARIGKTYL EEEEHHHHHHHCCCCEEEEEEEEEEEEEECCEEEEECCCCHHHHHHCCCHHHHHHHHHHH GFKYQPFFDLDKPYFFVIEGAVGFPSGPDTDRFTGGNYYTGSGFIKLGYLYERWSFVTKI CEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEECHHHHHHHHHHHH GGLNPLSRPQPNNLQDNDGIPFYFRKPSATPPEPEYEFKKTTLISAYVTYYLMPEISVFT CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH GVLYRNPYNGVDYSKEKDKANPSYFTEASVGFSWNFSEKYNMSLAYRYPLQRDREYRLYQ HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCEEEEECCCCCCCCHHEEH SAWTFAFSMEWGSD EEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA