| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222443
Identifier: 183222443
GI number: 183222443
Start: 3210322
End: 3211410
Strand: Direct
Name: 183222443
Synonym: LEPBI_I3097
Alternate gene names: NA
Gene position: 3210322-3211410 (Clockwise)
Preceding gene: 183222442
Following gene: 183222444
Centisome position: 89.18
GC content: 33.24
Gene sequence:
>1089_bases ATGAAATCGATATCAATTTATTCTTTCCCATTCTTAATTTTATTCAGCATCATCTTAATCGATAAGGTGATTTGTATTCC AGATGTTCGAGAAAGTGGTCGTAGAAATTACAAAGCGGGTCAAAATATTTTACTTGGGATGCCCGTCGTTTGGGAAGAAA ACAGTAAAATTAAAAATAGTGGGCAAAAAGTTGCAGTCGTAACTGGGACTTCTCGTTCGGAATCATTTCATGAATGGTCA GAAATTCCAGTAAAAAAATCCACTTTAAAGGATCCTATATATTTCGAAACTCGAACGGCCGTTAAAGCTTCGGAATTCAT GTTATTTTATCTTCTCGTAAAATCCATGTCAGATGCCAAATTTAAACCAGACATTCTGTTTTTGGAATTTTCAGATGAAA TGTTGAACGAAAACAACATCTATACCTATAAAACAAAATGGGCAGAATTGATGTTACATGAAAGTGAACTGATCGATCTA TATGATGCGATGAATCCCGAAATACAGAGAGATATCGTCACTCGTTTAATATTTTTAGGATATAACTATCATTTCAAACC CTTGCAAGCAGTGAAAAATTTGCTCACGGGAGAACGAGTGTCAAATGATACTTACTTTATCGGAATTTCTTCCTATATGA ATACAAAACGTCCTTTTTCTGCTGATAAAATTGGTTATGAAATAGATCAATTCCCACCAGAGGAATTCCAAGAGAGGATC GTAAATTACTCCGAATCCAGAAGGGAACATTTTTTAAGTCGATTCCAAATCTCAGAAACGGAAACTAATTTTTTTAAGAA AATCATTGCCCATATTGAAAAAAATAATATTCCAACCGTCATCTGGGAACCACAAATCCATCCATATTATCAAAATATTC GATCACAAATAACAAAAGAAAGTATCTTCAACCGATATATGAAAATGTATATCAATCCTAATTCAAAAAATATTCGTTTT GTGAGTCTGAATCAGGGTGGCTTAAGTTGTAAAACTTATGTAGATTGTAGTCATGTTTCTCCAGTTTGTGTTCCAGATAT CGTAGATAAGTTATTGCAAACTGCAAAGGAAATTCCAAACTTTCAATAA
Upstream 100 bases:
>100_bases CTTGGATCATTTTTTTCTTAAGTTTCTTCGTTTATATAGCTCTCAGCAAAATTGAAGCACCTGTAGAGACATTTATTTAC TTTCAGTTTTAAAGGCATAT
Downstream 100 bases:
>100_bases ACCTATGAAACTGAGCGGAAAACAGGTCCAAAAAATCAGACAAAGTCTCTTACTTTGTTTCGTTATTTTGTTTTCTGCCA ATTTTATGTATCAAAGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKSISIYSFPFLILFSIILIDKVICIPDVRESGRRNYKAGQNILLGMPVVWEENSKIKNSGQKVAVVTGTSRSESFHEWS EIPVKKSTLKDPIYFETRTAVKASEFMLFYLLVKSMSDAKFKPDILFLEFSDEMLNENNIYTYKTKWAELMLHESELIDL YDAMNPEIQRDIVTRLIFLGYNYHFKPLQAVKNLLTGERVSNDTYFIGISSYMNTKRPFSADKIGYEIDQFPPEEFQERI VNYSESRREHFLSRFQISETETNFFKKIIAHIEKNNIPTVIWEPQIHPYYQNIRSQITKESIFNRYMKMYINPNSKNIRF VSLNQGGLSCKTYVDCSHVSPVCVPDIVDKLLQTAKEIPNFQ
Sequences:
>Translated_362_residues MKSISIYSFPFLILFSIILIDKVICIPDVRESGRRNYKAGQNILLGMPVVWEENSKIKNSGQKVAVVTGTSRSESFHEWS EIPVKKSTLKDPIYFETRTAVKASEFMLFYLLVKSMSDAKFKPDILFLEFSDEMLNENNIYTYKTKWAELMLHESELIDL YDAMNPEIQRDIVTRLIFLGYNYHFKPLQAVKNLLTGERVSNDTYFIGISSYMNTKRPFSADKIGYEIDQFPPEEFQERI VNYSESRREHFLSRFQISETETNFFKKIIAHIEKNNIPTVIWEPQIHPYYQNIRSQITKESIFNRYMKMYINPNSKNIRF VSLNQGGLSCKTYVDCSHVSPVCVPDIVDKLLQTAKEIPNFQ >Mature_362_residues MKSISIYSFPFLILFSIILIDKVICIPDVRESGRRNYKAGQNILLGMPVVWEENSKIKNSGQKVAVVTGTSRSESFHEWS EIPVKKSTLKDPIYFETRTAVKASEFMLFYLLVKSMSDAKFKPDILFLEFSDEMLNENNIYTYKTKWAELMLHESELIDL YDAMNPEIQRDIVTRLIFLGYNYHFKPLQAVKNLLTGERVSNDTYFIGISSYMNTKRPFSADKIGYEIDQFPPEEFQERI VNYSESRREHFLSRFQISETETNFFKKIIAHIEKNNIPTVIWEPQIHPYYQNIRSQITKESIFNRYMKMYINPNSKNIRF VSLNQGGLSCKTYVDCSHVSPVCVPDIVDKLLQTAKEIPNFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42363; Mature: 42363
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSISIYSFPFLILFSIILIDKVICIPDVRESGRRNYKAGQNILLGMPVVWEENSKIKNS CCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEECCCEEECCCCCCCCC GQKVAVVTGTSRSESFHEWSEIPVKKSTLKDPIYFETRTAVKASEFMLFYLLVKSMSDAK CCEEEEEECCCCCCCHHHHHHCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCC FKPDILFLEFSDEMLNENNIYTYKTKWAELMLHESELIDLYDAMNPEIQRDIVTRLIFLG CCCCEEEEEECHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC YNYHFKPLQAVKNLLTGERVSNDTYFIGISSYMNTKRPFSADKIGYEIDQFPPEEFQERI CCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHH VNYSESRREHFLSRFQISETETNFFKKIIAHIEKNNIPTVIWEPQIHPYYQNIRSQITKE HCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHH SIFNRYMKMYINPNSKNIRFVSLNQGGLSCKTYVDCSHVSPVCVPDIVDKLLQTAKEIPN HHHHHHHHEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC FQ CC >Mature Secondary Structure MKSISIYSFPFLILFSIILIDKVICIPDVRESGRRNYKAGQNILLGMPVVWEENSKIKNS CCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEECCCEEECCCCCCCCC GQKVAVVTGTSRSESFHEWSEIPVKKSTLKDPIYFETRTAVKASEFMLFYLLVKSMSDAK CCEEEEEECCCCCCCHHHHHHCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCC FKPDILFLEFSDEMLNENNIYTYKTKWAELMLHESELIDLYDAMNPEIQRDIVTRLIFLG CCCCEEEEEECHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC YNYHFKPLQAVKNLLTGERVSNDTYFIGISSYMNTKRPFSADKIGYEIDQFPPEEFQERI CCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHH VNYSESRREHFLSRFQISETETNFFKKIIAHIEKNNIPTVIWEPQIHPYYQNIRSQITKE HCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHH SIFNRYMKMYINPNSKNIRFVSLNQGGLSCKTYVDCSHVSPVCVPDIVDKLLQTAKEIPN HHHHHHHHEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC FQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA