| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is cysK2 [H]
Identifier: 183222435
GI number: 183222435
Start: 3197443
End: 3198417
Strand: Direct
Name: cysK2 [H]
Synonym: LEPBI_I3089
Alternate gene names: 183222435
Gene position: 3197443-3198417 (Clockwise)
Preceding gene: 183222429
Following gene: 183222436
Centisome position: 88.83
GC content: 43.28
Gene sequence:
>975_bases ATGCAAACAGAAATTAGAAATGGATTTATTGCGACGATTGGAAATACACCTCTCATCCGCATTCGTTCCTTAAGTGAAGA AACAGGATGTGAAATCCTGGGAAAGGCGGAATTTTTAAACCCTGGTGGTTCTGTCAAAGACCGCGCAGCTCTTTACATCA TTGAAGATGCGGAAAAAAGAGGCCTCTTAAAAAAAGGGGGAACCGTTGTGGAAGGGACGGCGGGCAATACAGGAATTGGT CTCACTCATATTTGTAATGCAAAAGGTTACAAATCCATCATTGTCATCCCCGAAACACAATCCAAAGAAAAAATTGAAAT GTTACGCACGTTAGGTGCAGAAGTCATCTTAGTACCTGCAGTACCTTATGTTGATCCCGGAAATTATGTGCGTGTTTCGG AACGAATCGCAAAAGAAACACCCAATTCCCTTTGGGCAAACCAATTTGATAACCTTGCCAACAGGAATGCTCACTTTGAA ACCACAGGTCCCGAAATTTGGAACCAAACCCAAGGAAAAATTGATGTCTGGACCACTTCGATTGGAACGGGAGGGACATA CGCCGGAACCGCTCTTTATCTCAAATCAAAAAATCCAAATGTAAAATGCATTGTGGCAGATCCGTATGGTTCTGGAGTGT ATTCATTTGTGAAAACTGGAACGATTACGATCGAAGGATCTTCCATCACAGAAGGGATCGGGCAAGGTCGCATCACAAAA AATATGGAAGGAATGCCTTCTGACGATGCCATTCGCATCCACGACAAACAAGCACTCGAAATCTTACAAAAGGTCCTCCG AGAGGATGGACTCTTTATGGGAGGAAGTGTCGGAATCAATTTGGCAGCCGCCTTCCAAATCGCAAAAGAGATAGGACCTG GACACACCATCGTGACTGTGTTATGTGACACAGGAACCAAATACCAATCCAAACTTTACAATCCTGATTTTTTGAAATCC AAGGGACTTTTGTGA
Upstream 100 bases:
>100_bases TTTTTGTGGGATCGCAGGAGCAGGTGCGAACCACTGCCGAATGGACTTGTACATAAACTTGGAAATTGAAGTCTAATAGA GAGGAGTCAAGTGTATTCTT
Downstream 100 bases:
>100_bases TGTGACGATGAGACAAAATTTGTCCAATTTTAGGCATCCAATGATTCCACTTGGCGACAAAAAAACTATCCATTCGAAAA GAACCAAAAACAATCATCAG
Product: cysteine synthase A
Products: NA
Alternate protein names: CSase; O-acetylserine (thiol)-lyase; OAS-TL; O-acetylserine sulfhydrylase [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MQTEIRNGFIATIGNTPLIRIRSLSEETGCEILGKAEFLNPGGSVKDRAALYIIEDAEKRGLLKKGGTVVEGTAGNTGIG LTHICNAKGYKSIIVIPETQSKEKIEMLRTLGAEVILVPAVPYVDPGNYVRVSERIAKETPNSLWANQFDNLANRNAHFE TTGPEIWNQTQGKIDVWTTSIGTGGTYAGTALYLKSKNPNVKCIVADPYGSGVYSFVKTGTITIEGSSITEGIGQGRITK NMEGMPSDDAIRIHDKQALEILQKVLREDGLFMGGSVGINLAAAFQIAKEIGPGHTIVTVLCDTGTKYQSKLYNPDFLKS KGLL
Sequences:
>Translated_324_residues MQTEIRNGFIATIGNTPLIRIRSLSEETGCEILGKAEFLNPGGSVKDRAALYIIEDAEKRGLLKKGGTVVEGTAGNTGIG LTHICNAKGYKSIIVIPETQSKEKIEMLRTLGAEVILVPAVPYVDPGNYVRVSERIAKETPNSLWANQFDNLANRNAHFE TTGPEIWNQTQGKIDVWTTSIGTGGTYAGTALYLKSKNPNVKCIVADPYGSGVYSFVKTGTITIEGSSITEGIGQGRITK NMEGMPSDDAIRIHDKQALEILQKVLREDGLFMGGSVGINLAAAFQIAKEIGPGHTIVTVLCDTGTKYQSKLYNPDFLKS KGLL >Mature_324_residues MQTEIRNGFIATIGNTPLIRIRSLSEETGCEILGKAEFLNPGGSVKDRAALYIIEDAEKRGLLKKGGTVVEGTAGNTGIG LTHICNAKGYKSIIVIPETQSKEKIEMLRTLGAEVILVPAVPYVDPGNYVRVSERIAKETPNSLWANQFDNLANRNAHFE TTGPEIWNQTQGKIDVWTTSIGTGGTYAGTALYLKSKNPNVKCIVADPYGSGVYSFVKTGTITIEGSSITEGIGQGRITK NMEGMPSDDAIRIHDKQALEILQKVLREDGLFMGGSVGINLAAAFQIAKEIGPGHTIVTVLCDTGTKYQSKLYNPDFLKS KGLL
Specific function: Two Cysteine Synthase Enzymes Are Found. Both Catalyze The Same Reaction. Cysteine Synthase B Can Also Use Thiosulfate In Place Of Sulfide To Give Cysteine Thiosulfonate As A Product. [C]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=324, Percent_Identity=38.8888888888889, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI295821200, Length=324, Percent_Identity=38.8888888888889, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI4557415, Length=324, Percent_Identity=38.8888888888889, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI11345492, Length=200, Percent_Identity=29, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI2367138, Length=303, Percent_Identity=35.6435643564356, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1788754, Length=315, Percent_Identity=35.5555555555556, Blast_Score=159, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17562970, Length=307, Percent_Identity=40.0651465798046, Blast_Score=201, Evalue=3e-52, Organism=Caenorhabditis elegans, GI32566674, Length=300, Percent_Identity=40.3333333333333, Blast_Score=201, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17535051, Length=304, Percent_Identity=38.4868421052632, Blast_Score=197, Evalue=6e-51, Organism=Caenorhabditis elegans, GI115535073, Length=310, Percent_Identity=37.0967741935484, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17561720, Length=307, Percent_Identity=38.4364820846906, Blast_Score=172, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17534315, Length=332, Percent_Identity=32.2289156626506, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI25147552, Length=329, Percent_Identity=31.306990881459, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI32566672, Length=222, Percent_Identity=35.5855855855856, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71996324, Length=341, Percent_Identity=24.9266862170088, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321449, Length=331, Percent_Identity=41.9939577039275, Blast_Score=226, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6321594, Length=334, Percent_Identity=32.6347305389222, Blast_Score=176, Evalue=5e-45, Organism=Drosophila melanogaster, GI24643623, Length=325, Percent_Identity=35.6923076923077, Blast_Score=194, Evalue=5e-50, Organism=Drosophila melanogaster, GI20129101, Length=325, Percent_Identity=35.6923076923077, Blast_Score=194, Evalue=5e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 34907; Mature: 34907
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS00901 CYS_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTEIRNGFIATIGNTPLIRIRSLSEETGCEILGKAEFLNPGGSVKDRAALYIIEDAEKR CCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEECEEEECCCCCCCCCEEEEEEECCCCC GLLKKGGTVVEGTAGNTGIGLTHICNAKGYKSIIVIPETQSKEKIEMLRTLGAEVILVPA CHHHCCCEEEECCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECC VPYVDPGNYVRVSERIAKETPNSLWANQFDNLANRNAHFETTGPEIWNQTQGKIDVWTTS CCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCHHHHCCCCCEEEEEEEE IGTGGTYAGTALYLKSKNPNVKCIVADPYGSGVYSFVKTGTITIEGSSITEGIGQGRITK CCCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHCCCEEEEECCHHHHCCCCCCEEC NMEGMPSDDAIRIHDKQALEILQKVLREDGLFMGGSVGINLAAAFQIAKEIGPGHTIVTV CCCCCCCCCEEEEECHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEE LCDTGTKYQSKLYNPDFLKSKGLL EECCCCHHHHHCCCCCHHHCCCCC >Mature Secondary Structure MQTEIRNGFIATIGNTPLIRIRSLSEETGCEILGKAEFLNPGGSVKDRAALYIIEDAEKR CCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEECEEEECCCCCCCCCEEEEEEECCCCC GLLKKGGTVVEGTAGNTGIGLTHICNAKGYKSIIVIPETQSKEKIEMLRTLGAEVILVPA CHHHCCCEEEECCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECC VPYVDPGNYVRVSERIAKETPNSLWANQFDNLANRNAHFETTGPEIWNQTQGKIDVWTTS CCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCHHHHCCCCCEEEEEEEE IGTGGTYAGTALYLKSKNPNVKCIVADPYGSGVYSFVKTGTITIEGSSITEGIGQGRITK CCCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHCCCEEEEECCHHHHCCCCCCEEC NMEGMPSDDAIRIHDKQALEILQKVLREDGLFMGGSVGINLAAAFQIAKEIGPGHTIVTV CCCCCCCCCEEEEECHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEE LCDTGTKYQSKLYNPDFLKSKGLL EECCCCHHHHHCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA