| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222407
Identifier: 183222407
GI number: 183222407
Start: 3173480
End: 3174664
Strand: Direct
Name: 183222407
Synonym: LEPBI_I3061
Alternate gene names: NA
Gene position: 3173480-3174664 (Clockwise)
Preceding gene: 183222406
Following gene: 183222409
Centisome position: 88.16
GC content: 38.31
Gene sequence:
>1185_bases ATGCAATCTTTCTCTACTTTCTTTTTTTTATTCATTTTCTTTCTAACTTCGTGTAACGACCAGTCTACCAACAAAGATTT GTTTCTTTTGGCTTTTTTGAATTTTTCAGGAGTTCCTGCCAATTCTGGACTAGAAGACAAATTCCAATCCACTCAAGCAA CTACCTTTTATCGAAAGGATGGAAACATAGAATTCCAAGACATTCTCATTGAATACAAACTGAACTCATCGCAAGTCACT TCGGAAACTGTAGAAGCATTTATAGGAAATCCAAATGAAATTTCTTATGATGCGCAAACGAATCAAATTTCTGGATTTTT CCAACAGAAAGAGGATTCATTCCAAACGAATTCAGTTGTCTTTTCGTATTCAGATCATACAAAAAAATTCAAAGTTTTAA TCACTGTAAAGAGAGACGGTAAAGTGATTTCCTTACGGGAACTGACCACCACTCCGCCAAATCCTCCAACCATCCCTCCT AATTCTATCACCTTACCTCTGATCAGTTATGAAACCAAACGATCGTTCATTGGTGGCACAGAACACCAAGTGATCCGAGT TAAATTTGAATCAGGTTCGGATCTATCCGCATTCAAACAACTAAATGCTTATATTGGTAGACCAAGTATCATCGCCCTTG CAGCGGATCAATATAATGTGAACAATTATATCTCTGCCTCGTATTTTGATACTTCATCCCAAAACTTTTTATTTTTAACT CCCGAACTAAACTCATCTTATAAAATTATTGTTGTGGGTTCCACTGCTGATGCAAAAGGAAATCGAAGTATCGATACTGT TCCTCCTCCCCCACCAGTTTCCCCATGCCTTGGAAGTGTGAATGCTCCTACTACCATTGGAAACTGTGCAACCCATTGTA TGGTTGTGGATTTAGTTGGGAATCAAATGACATATACAACAAAAGCAACAATCCAAACTGCAACCGAAGACTACCTCTAT TTAGATTCCACAAGTTCTACGGTGAGTGGCAACAGCGGACCCGCAGGTTTTACATATGATGAATTTTTTTCTCCGATCAC TGCGGGAACATACCAAACGAACCCAAGTACCTTTGATGTCACGTCTTATCATGAACAATGTGTCGTCCTTTCTTCCTATT TTGTGCAAGATGGACCTAATGGATTTCGAGATCATTATCTCTCAGGAAAAGTTTTTGTCCCATAA
Upstream 100 bases:
>100_bases GCAAATATTCTAATACACACGATAAATTATTTTTTTACAAAATCAGAGATTCATAAAATTTTGTGAATTAAATATTCCCT TTATTTGTTAAACGATATAG
Downstream 100 bases:
>100_bases CAGTCATTATACTAAATAATTGAATTTAATTAATTCTCTACAGGATTTTGATTTCACCGAGGGAATCTAATTTCAAAGAA TGTTGTTTGTTCTAGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MQSFSTFFFLFIFFLTSCNDQSTNKDLFLLAFLNFSGVPANSGLEDKFQSTQATTFYRKDGNIEFQDILIEYKLNSSQVT SETVEAFIGNPNEISYDAQTNQISGFFQQKEDSFQTNSVVFSYSDHTKKFKVLITVKRDGKVISLRELTTTPPNPPTIPP NSITLPLISYETKRSFIGGTEHQVIRVKFESGSDLSAFKQLNAYIGRPSIIALAADQYNVNNYISASYFDTSSQNFLFLT PELNSSYKIIVVGSTADAKGNRSIDTVPPPPPVSPCLGSVNAPTTIGNCATHCMVVDLVGNQMTYTTKATIQTATEDYLY LDSTSSTVSGNSGPAGFTYDEFFSPITAGTYQTNPSTFDVTSYHEQCVVLSSYFVQDGPNGFRDHYLSGKVFVP
Sequences:
>Translated_394_residues MQSFSTFFFLFIFFLTSCNDQSTNKDLFLLAFLNFSGVPANSGLEDKFQSTQATTFYRKDGNIEFQDILIEYKLNSSQVT SETVEAFIGNPNEISYDAQTNQISGFFQQKEDSFQTNSVVFSYSDHTKKFKVLITVKRDGKVISLRELTTTPPNPPTIPP NSITLPLISYETKRSFIGGTEHQVIRVKFESGSDLSAFKQLNAYIGRPSIIALAADQYNVNNYISASYFDTSSQNFLFLT PELNSSYKIIVVGSTADAKGNRSIDTVPPPPPVSPCLGSVNAPTTIGNCATHCMVVDLVGNQMTYTTKATIQTATEDYLY LDSTSSTVSGNSGPAGFTYDEFFSPITAGTYQTNPSTFDVTSYHEQCVVLSSYFVQDGPNGFRDHYLSGKVFVP >Mature_394_residues MQSFSTFFFLFIFFLTSCNDQSTNKDLFLLAFLNFSGVPANSGLEDKFQSTQATTFYRKDGNIEFQDILIEYKLNSSQVT SETVEAFIGNPNEISYDAQTNQISGFFQQKEDSFQTNSVVFSYSDHTKKFKVLITVKRDGKVISLRELTTTPPNPPTIPP NSITLPLISYETKRSFIGGTEHQVIRVKFESGSDLSAFKQLNAYIGRPSIIALAADQYNVNNYISASYFDTSSQNFLFLT PELNSSYKIIVVGSTADAKGNRSIDTVPPPPPVSPCLGSVNAPTTIGNCATHCMVVDLVGNQMTYTTKATIQTATEDYLY LDSTSSTVSGNSGPAGFTYDEFFSPITAGTYQTNPSTFDVTSYHEQCVVLSSYFVQDGPNGFRDHYLSGKVFVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43495; Mature: 43495
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSFSTFFFLFIFFLTSCNDQSTNKDLFLLAFLNFSGVPANSGLEDKFQSTQATTFYRKD CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEEEEEC GNIEFQDILIEYKLNSSQVTSETVEAFIGNPNEISYDAQTNQISGFFQQKEDSFQTNSVV CCEEEEEEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEE FSYSDHTKKFKVLITVKRDGKVISLRELTTTPPNPPTIPPNSITLPLISYETKRSFIGGT EEECCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECHHHHHCCCC EHQVIRVKFESGSDLSAFKQLNAYIGRPSIIALAADQYNVNNYISASYFDTSSQNFLFLT CCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEE PELNSSYKIIVVGSTADAKGNRSIDTVPPPPPVSPCLGSVNAPTTIGNCATHCMVVDLVG CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHEEEEEEECC NQMTYTTKATIQTATEDYLYLDSTSSTVSGNSGPAGFTYDEFFSPITAGTYQTNPSTFDV CEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCEEEE TSYHEQCVVLSSYFVQDGPNGFRDHYLSGKVFVP CCCCCCEEEEEHHHHCCCCCCHHHHCCCCEEECC >Mature Secondary Structure MQSFSTFFFLFIFFLTSCNDQSTNKDLFLLAFLNFSGVPANSGLEDKFQSTQATTFYRKD CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEEEEEC GNIEFQDILIEYKLNSSQVTSETVEAFIGNPNEISYDAQTNQISGFFQQKEDSFQTNSVV CCEEEEEEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEE FSYSDHTKKFKVLITVKRDGKVISLRELTTTPPNPPTIPPNSITLPLISYETKRSFIGGT EEECCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECHHHHHCCCC EHQVIRVKFESGSDLSAFKQLNAYIGRPSIIALAADQYNVNNYISASYFDTSSQNFLFLT CCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEE PELNSSYKIIVVGSTADAKGNRSIDTVPPPPPVSPCLGSVNAPTTIGNCATHCMVVDLVG CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHEEEEEEECC NQMTYTTKATIQTATEDYLYLDSTSSTVSGNSGPAGFTYDEFFSPITAGTYQTNPSTFDV CEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCEEEE TSYHEQCVVLSSYFVQDGPNGFRDHYLSGKVFVP CCCCCCEEEEEHHHHCCCCCCHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA