| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222406
Identifier: 183222406
GI number: 183222406
Start: 3170765
End: 3173140
Strand: Direct
Name: 183222406
Synonym: LEPBI_I3060
Alternate gene names: NA
Gene position: 3170765-3173140 (Clockwise)
Preceding gene: 183222405
Following gene: 183222407
Centisome position: 88.08
GC content: 39.81
Gene sequence:
>2376_bases GTGAAATTGTCTCAAAGTCTAAACATTGGCATTATGAACTCATACCGTTTTTTGATTTCGCTCTTTCTCATTTACTTTAG TGTTTCTACGTGTAAACCTTCCACTCTGGAAAATGGTTGTGACCCAAGTTCGAAATCTTTTTATTCATTGGTACTCATCA AGAGTCTGTCCAACGAACGTTCTGCAAGTTGTGTTCCTTTTTTCGAAAGGAGCTTACCTAATTTTATCAGTTATGGTGTG TTTTCAGCTGGCTCACCAACGGAAGTATTGACCGCCGCCATCGCAAAAGGGAAATTTTATATCGGCGGTTTGTTTGATCA AATCGCGGCAACCACCGGTGGGGGAGCCTTTGTTTGGAGTGATTCTGGCACTCCCGTTGCTTCTACCTATTGCCCACAAT TGGACGTATTCAATGACACAACATCCAGTTTTGGAACGATCAACCAAGCGGTTCTCGACCCAGAAGGAAATCTTTACATT CTGGGAAACTTCACCCACATCCAAAGTTATCCGAGGCAAAACTTAGCCAAAATCAACTCGCGATGCCAATTGGATTTAGA GTTTGATGCAAAATTAAATCCATCTAGTACCATTTTTTATGATCTGCTCTATTTAGATGGTCGTATCTTTATTTCAGGCG ACTTCCAAACTTCCAATGGAGCCATCACCAATGTTCCTACCACTACGTTTCGTGAACATATTGCCTCTGTGAATGCAAAA ACGGGATTGATTGACTCTTGGAATCCAAATGTAACAGGAACAGATGTTAGATGTATGACAACTGATGGCACCTATATTTA TATTGGAGGTGGGTTTACTGCTGTGAATGCAAATGGGGCAGGCAATCTAGGCAAACTGCACAAAGACAACGGTTCCACTT TTTATGCGATGGTTGATACTAACGGTACAGTCAATGCAGTGGAAATAAAAGATGGAATTTTATACATCGGCGGAGTTTTC TCAGCTCTGAACGGAAGCACTGTCACTCGTTCCAAACTGGCAGCCATTGATTTATCCACAAACTCGGTGACATCTGCTTT CAGTTCGTTAACGATCGCAGGAAATGCAGTCTTTGATATCGCAATTTACAATAATACACTCTTTGTAGCAGGTGAAATTT CAACACCTAGACTCGGAATCTTTAAGATAGATTTACTCGGGACAGTGCAAAGTAATAATTATGCAATTGATGGAATCTTT CAAAATGTATACAAACTTTCACTCGTTGGAGATCAGTTGTTTGCATTTGGATCATTTGAAACGGTATGTACATTAGATAG AAAGTATTTTTTTCAATTGGACATTCCGACAGATCAAATCACTTCATTTGATCCCAAGCTTATGAATGCCAATTATGAAT TCAATGGCGTTGCGATAAAGATGAAAGATAATGTGATCTTTTTGGGAGGTGGATTCGGAGCCGTTGACACAAGATCACAA AGTTATTTTGCTGAATTGGATCTACAAACAGGTCAGCCAACAAATTGGAATCCGCAACCGAATGATCTCATTTCCAATAT CTTAATTGCAGAAAATCGAATTTACTTACACGGACAATTTTCATTGATTGATAGCACTGTTCGTCAATCCACAGCAGCTT TTGATTTAGACACAAAAGCATTGTTAGCTTGGAATCCAATTTTTCCTGCCGTCTCAATCGAATCCATGATTTATCATCAA GACTCCATTTATGTAGGTGGTTCGTTTACGACCGTTAACTCAATATCTGTCAACCGTATCGCAAAACATGATCTCAATGA AAGTGGATTTGATCCAAATTTCATAACAACTCCCAATAATACAGTGCGATCCCTACAAATCTGGAACGAAGAGCTTTTTG CAGCCGGCCAATTCACATCCATTCCTGACGCAGCAATCCACCTAGCTAAACTCAATCGATCGACTGGTGGTTTTCTCGGA ACCCATTCAGATACTTTTTCCTCTAACTTTTCTGCCTATACTAGTTTTGTTTCTGACAACCGTTTGATTTTAAGCGGACA ATACGAAACTGTATCTCCCATCCCAGGGTTTGGTCTTTCTTTTTACCAACTTCCAAATTTAACTTCAATTTCCACCAATG GAACCTTTGCCAGTACATCCGAATTCGTTCGATCCATCGACCAAAGCGAAACAAGGATCTACTTAGGAGGCCTTATCACA ACCGTCGGAGGTAATGCGCGAAATGGAATTTTTTCTTTGAACCGACAAACACTAACAATTAATAGTTGGGATCCAAAATT AGAATCGGGTTCGGCAATCCGAAAAATCATTTTTCATGAAAATGCGGTTTATGCGTTTGGCAACATTGTGAATGCTAACA AACGTTACAGATCCGGAATCGTAAAAATGGAAGCGGAGTCGGGGTTTTTATATTAA
Upstream 100 bases:
>100_bases AAACAACAACGCATCAAGACGACAAACATAAAGCTTTCGAAAATCTAACAGATGAGAGGTGGTTTGCGGTAAATATTATT TTAAGATTTGAATTTGACTC
Downstream 100 bases:
>100_bases AACATTACCGAAACGTAGACACGAAGCGAACATCCACCTACTCAGGAACCACAACAATGGTTCTTGAGAAAAAATCGAAT TCCTTCGAAATACCACATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MKLSQSLNIGIMNSYRFLISLFLIYFSVSTCKPSTLENGCDPSSKSFYSLVLIKSLSNERSASCVPFFERSLPNFISYGV FSAGSPTEVLTAAIAKGKFYIGGLFDQIAATTGGGAFVWSDSGTPVASTYCPQLDVFNDTTSSFGTINQAVLDPEGNLYI LGNFTHIQSYPRQNLAKINSRCQLDLEFDAKLNPSSTIFYDLLYLDGRIFISGDFQTSNGAITNVPTTTFREHIASVNAK TGLIDSWNPNVTGTDVRCMTTDGTYIYIGGGFTAVNANGAGNLGKLHKDNGSTFYAMVDTNGTVNAVEIKDGILYIGGVF SALNGSTVTRSKLAAIDLSTNSVTSAFSSLTIAGNAVFDIAIYNNTLFVAGEISTPRLGIFKIDLLGTVQSNNYAIDGIF QNVYKLSLVGDQLFAFGSFETVCTLDRKYFFQLDIPTDQITSFDPKLMNANYEFNGVAIKMKDNVIFLGGGFGAVDTRSQ SYFAELDLQTGQPTNWNPQPNDLISNILIAENRIYLHGQFSLIDSTVRQSTAAFDLDTKALLAWNPIFPAVSIESMIYHQ DSIYVGGSFTTVNSISVNRIAKHDLNESGFDPNFITTPNNTVRSLQIWNEELFAAGQFTSIPDAAIHLAKLNRSTGGFLG THSDTFSSNFSAYTSFVSDNRLILSGQYETVSPIPGFGLSFYQLPNLTSISTNGTFASTSEFVRSIDQSETRIYLGGLIT TVGGNARNGIFSLNRQTLTINSWDPKLESGSAIRKIIFHENAVYAFGNIVNANKRYRSGIVKMEAESGFLY
Sequences:
>Translated_791_residues MKLSQSLNIGIMNSYRFLISLFLIYFSVSTCKPSTLENGCDPSSKSFYSLVLIKSLSNERSASCVPFFERSLPNFISYGV FSAGSPTEVLTAAIAKGKFYIGGLFDQIAATTGGGAFVWSDSGTPVASTYCPQLDVFNDTTSSFGTINQAVLDPEGNLYI LGNFTHIQSYPRQNLAKINSRCQLDLEFDAKLNPSSTIFYDLLYLDGRIFISGDFQTSNGAITNVPTTTFREHIASVNAK TGLIDSWNPNVTGTDVRCMTTDGTYIYIGGGFTAVNANGAGNLGKLHKDNGSTFYAMVDTNGTVNAVEIKDGILYIGGVF SALNGSTVTRSKLAAIDLSTNSVTSAFSSLTIAGNAVFDIAIYNNTLFVAGEISTPRLGIFKIDLLGTVQSNNYAIDGIF QNVYKLSLVGDQLFAFGSFETVCTLDRKYFFQLDIPTDQITSFDPKLMNANYEFNGVAIKMKDNVIFLGGGFGAVDTRSQ SYFAELDLQTGQPTNWNPQPNDLISNILIAENRIYLHGQFSLIDSTVRQSTAAFDLDTKALLAWNPIFPAVSIESMIYHQ DSIYVGGSFTTVNSISVNRIAKHDLNESGFDPNFITTPNNTVRSLQIWNEELFAAGQFTSIPDAAIHLAKLNRSTGGFLG THSDTFSSNFSAYTSFVSDNRLILSGQYETVSPIPGFGLSFYQLPNLTSISTNGTFASTSEFVRSIDQSETRIYLGGLIT TVGGNARNGIFSLNRQTLTINSWDPKLESGSAIRKIIFHENAVYAFGNIVNANKRYRSGIVKMEAESGFLY >Mature_791_residues MKLSQSLNIGIMNSYRFLISLFLIYFSVSTCKPSTLENGCDPSSKSFYSLVLIKSLSNERSASCVPFFERSLPNFISYGV FSAGSPTEVLTAAIAKGKFYIGGLFDQIAATTGGGAFVWSDSGTPVASTYCPQLDVFNDTTSSFGTINQAVLDPEGNLYI LGNFTHIQSYPRQNLAKINSRCQLDLEFDAKLNPSSTIFYDLLYLDGRIFISGDFQTSNGAITNVPTTTFREHIASVNAK TGLIDSWNPNVTGTDVRCMTTDGTYIYIGGGFTAVNANGAGNLGKLHKDNGSTFYAMVDTNGTVNAVEIKDGILYIGGVF SALNGSTVTRSKLAAIDLSTNSVTSAFSSLTIAGNAVFDIAIYNNTLFVAGEISTPRLGIFKIDLLGTVQSNNYAIDGIF QNVYKLSLVGDQLFAFGSFETVCTLDRKYFFQLDIPTDQITSFDPKLMNANYEFNGVAIKMKDNVIFLGGGFGAVDTRSQ SYFAELDLQTGQPTNWNPQPNDLISNILIAENRIYLHGQFSLIDSTVRQSTAAFDLDTKALLAWNPIFPAVSIESMIYHQ DSIYVGGSFTTVNSISVNRIAKHDLNESGFDPNFITTPNNTVRSLQIWNEELFAAGQFTSIPDAAIHLAKLNRSTGGFLG THSDTFSSNFSAYTSFVSDNRLILSGQYETVSPIPGFGLSFYQLPNLTSISTNGTFASTSEFVRSIDQSETRIYLGGLIT TVGGNARNGIFSLNRQTLTINSWDPKLESGSAIRKIIFHENAVYAFGNIVNANKRYRSGIVKMEAESGFLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86113; Mature: 86113
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSQSLNIGIMNSYRFLISLFLIYFSVSTCKPSTLENGCDPSSKSFYSLVLIKSLSNER CCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCC SASCVPFFERSLPNFISYGVFSAGSPTEVLTAAIAKGKFYIGGLFDQIAATTGGGAFVWS CCCCCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHCCCCCEEEEC DSGTPVASTYCPQLDVFNDTTSSFGTINQAVLDPEGNLYILGNFTHIQSYPRQNLAKINS CCCCEEEHCCCCCEECCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHHCCHHHHHHHCC RCQLDLEFDAKLNPSSTIFYDLLYLDGRIFISGDFQTSNGAITNVPTTTFREHIASVNAK EEEEEEEECCCCCCCCEEEEEEEEECCEEEEEECEECCCCEEECCCCHHHHHHHHHCCCC TGLIDSWNPNVTGTDVRCMTTDGTYIYIGGGFTAVNANGAGNLGKLHKDNGSTFYAMVDT CCEEECCCCCCCCCEEEEEEECCCEEEECCCEEEEECCCCCCCCCEEECCCCEEEEEEEC NGTVNAVEIKDGILYIGGVFSALNGSTVTRSKLAAIDLSTNSVTSAFSSLTIAGNAVFDI CCCEEEEEECCCEEEEEEHHHHCCCCEEECCEEEEEEECCCHHHHHHHEEEEECCEEEEE AIYNNTLFVAGEISTPRLGIFKIDLLGTVQSNNYAIDGIFQNVYKLSLVGDQLFAFGSFE EEECCEEEEEECCCCCCEEEEEEEEEEEEECCCEEEHHHHHHHEEEEEECCHHEECCCCC TVCTLDRKYFFQLDIPTDQITSFDPKLMNANYEFNGVAIKMKDNVIFLGGGFGAVDTRSQ EEEEECCEEEEEEECCHHHHCCCCCHHCCCCEEECEEEEEEECCEEEEECCCCCCCCCCC SYFAELDLQTGQPTNWNPQPNDLISNILIAENRIYLHGQFSLIDSTVRQSTAAFDLDTKA CEEEEEEECCCCCCCCCCCHHHHHHHEEEECCEEEEEEEHHHHHHHHHHHHEEEECCCCE LLAWNPIFPAVSIESMIYHQDSIYVGGSFTTVNSISVNRIAKHDLNESGFDPNFITTPNN EEEECCCCCCEEHHHEEEECCEEEECCCEEEEECEEHHHHHHCCCCCCCCCCCEEECCCC TVRSLQIWNEELFAAGQFTSIPDAAIHLAKLNRSTGGFLGTHSDTFSSNFSAYTSFVSDN CEEEEEEECHHHHCCCCCCCCCHHHEEEEECCCCCCCEECCCCCCCCCCCHHHHHEECCC RLILSGQYETVSPIPGFGLSFYQLPNLTSISTNGTFASTSEFVRSIDQSETRIYLGGLIT EEEEECCCCEECCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEE TVGGNARNGIFSLNRQTLTINSWDPKLESGSAIRKIIFHENAVYAFGNIVNANKRYRSGI ECCCCCCCCEEEECCEEEEEECCCCCCCCCCHHEEEEEECCEEEEECCEECCCCHHHCCE VKMEAESGFLY EEEECCCCCCC >Mature Secondary Structure MKLSQSLNIGIMNSYRFLISLFLIYFSVSTCKPSTLENGCDPSSKSFYSLVLIKSLSNER CCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCC SASCVPFFERSLPNFISYGVFSAGSPTEVLTAAIAKGKFYIGGLFDQIAATTGGGAFVWS CCCCCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHCCCCCEEEEC DSGTPVASTYCPQLDVFNDTTSSFGTINQAVLDPEGNLYILGNFTHIQSYPRQNLAKINS CCCCEEEHCCCCCEECCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHHCCHHHHHHHCC RCQLDLEFDAKLNPSSTIFYDLLYLDGRIFISGDFQTSNGAITNVPTTTFREHIASVNAK EEEEEEEECCCCCCCCEEEEEEEEECCEEEEEECEECCCCEEECCCCHHHHHHHHHCCCC TGLIDSWNPNVTGTDVRCMTTDGTYIYIGGGFTAVNANGAGNLGKLHKDNGSTFYAMVDT CCEEECCCCCCCCCEEEEEEECCCEEEECCCEEEEECCCCCCCCCEEECCCCEEEEEEEC NGTVNAVEIKDGILYIGGVFSALNGSTVTRSKLAAIDLSTNSVTSAFSSLTIAGNAVFDI CCCEEEEEECCCEEEEEEHHHHCCCCEEECCEEEEEEECCCHHHHHHHEEEEECCEEEEE AIYNNTLFVAGEISTPRLGIFKIDLLGTVQSNNYAIDGIFQNVYKLSLVGDQLFAFGSFE EEECCEEEEEECCCCCCEEEEEEEEEEEEECCCEEEHHHHHHHEEEEEECCHHEECCCCC TVCTLDRKYFFQLDIPTDQITSFDPKLMNANYEFNGVAIKMKDNVIFLGGGFGAVDTRSQ EEEEECCEEEEEEECCHHHHCCCCCHHCCCCEEECEEEEEEECCEEEEECCCCCCCCCCC SYFAELDLQTGQPTNWNPQPNDLISNILIAENRIYLHGQFSLIDSTVRQSTAAFDLDTKA CEEEEEEECCCCCCCCCCCHHHHHHHEEEECCEEEEEEEHHHHHHHHHHHHEEEECCCCE LLAWNPIFPAVSIESMIYHQDSIYVGGSFTTVNSISVNRIAKHDLNESGFDPNFITTPNN EEEECCCCCCEEHHHEEEECCEEEECCCEEEEECEEHHHHHHCCCCCCCCCCCEEECCCC TVRSLQIWNEELFAAGQFTSIPDAAIHLAKLNRSTGGFLGTHSDTFSSNFSAYTSFVSDN CEEEEEEECHHHHCCCCCCCCCHHHEEEEECCCCCCCEECCCCCCCCCCCHHHHHEECCC RLILSGQYETVSPIPGFGLSFYQLPNLTSISTNGTFASTSEFVRSIDQSETRIYLGGLIT EEEEECCCCEECCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEE TVGGNARNGIFSLNRQTLTINSWDPKLESGSAIRKIIFHENAVYAFGNIVNANKRYRSGI ECCCCCCCCEEEECCEEEEEECCCCCCCCCCHHEEEEEECCEEEEECCEECCCCHHHCCE VKMEAESGFLY EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA