| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222385
Identifier: 183222385
GI number: 183222385
Start: 3154019
End: 3154870
Strand: Direct
Name: 183222385
Synonym: LEPBI_I3039
Alternate gene names: NA
Gene position: 3154019-3154870 (Clockwise)
Preceding gene: 183222384
Following gene: 183222386
Centisome position: 87.62
GC content: 44.01
Gene sequence:
>852_bases ATGAAAACAAACCCACTCTTTTTACTTTCATTCCTTATTTGTTTGTGGACCTTTTCATGCAAACCATCGGCATCATCTTC TGACGAAACTTTGGCGGCCCTCATCCCTCTTCTTGGTGCCAGTGCCAACGCCAACGTTTGTCCCAAATCGCCTCTGCCCT CCGATATTCTTTTGGCAAATACCATTGTCAGTGCGGAGGCAAATGTTTCTGGATTTTCTGATCCCAATAAAGCCATCAAT GGAGTCTGTGGGGCAGGAGAACTCGTTGGTTCTTTGGATGTGTATGCCTTAGAAATCTCGGGTTCAGGAGCCTCCATGAT CCTCAGTTGGGGAGGGCGGACTGTTAAAAATGTCCCAGACTCCATCGACTTCATTGTCTATGATAATAGCTTTCGGGTCT CAGGAGATACGAACACCTATGCCATGGACCCTTCCGTCATCCAGGTATCACTCGATGGATCCAAATATTGTGGTTTTAAT CCGAGTTATACGGCAGGAAACATCAATTTGATGACCAACTGGCTTAAGTTTGGCGGATTAAGACCAGTTTATTACAATAT GACCACCAATCCATTGTCAAACGAAGATTTATTCATAGTGACAGGAGGTACTTTCCTTCTCGGTGGTGGGGATGGTTTTG ATTTGCAGAATCTAGATGAAAACGATCCTAACGATGTTAATTGTGATGCCACTGCCGTAAGTGATATCCAAACAACAGGA TTTAAATTCATCAAAATCACTTCCGCAAGCAATGTAATCAATCATGCCGATGGCACAAACAAATTTCCATGGCCTCCTGG CAGTTATAATGGAAGTGATATCGACGGAGTCGTCGCTCGCGAATTACAATGA
Upstream 100 bases:
>100_bases GGGATTTACATTTAGTCGGGCACTTTCCAGAACCGAAAACTCAACTTGGACTGGACTTTAAACAGAATTTTTGTAAATTG GAAAGGAAACCACAACTGTT
Downstream 100 bases:
>100_bases ATCCGTAGTCATTATGTCTGATCCAATGGTGGATCGGAGCCAATTGGAAAAAACAATTCAAAAAGGTTCGTATTTCAGTT GACCTATTTTGAAAAAGAGT
Product: putative signal peptide
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKTNPLFLLSFLICLWTFSCKPSASSSDETLAALIPLLGASANANVCPKSPLPSDILLANTIVSAEANVSGFSDPNKAIN GVCGAGELVGSLDVYALEISGSGASMILSWGGRTVKNVPDSIDFIVYDNSFRVSGDTNTYAMDPSVIQVSLDGSKYCGFN PSYTAGNINLMTNWLKFGGLRPVYYNMTTNPLSNEDLFIVTGGTFLLGGGDGFDLQNLDENDPNDVNCDATAVSDIQTTG FKFIKITSASNVINHADGTNKFPWPPGSYNGSDIDGVVARELQ
Sequences:
>Translated_283_residues MKTNPLFLLSFLICLWTFSCKPSASSSDETLAALIPLLGASANANVCPKSPLPSDILLANTIVSAEANVSGFSDPNKAIN GVCGAGELVGSLDVYALEISGSGASMILSWGGRTVKNVPDSIDFIVYDNSFRVSGDTNTYAMDPSVIQVSLDGSKYCGFN PSYTAGNINLMTNWLKFGGLRPVYYNMTTNPLSNEDLFIVTGGTFLLGGGDGFDLQNLDENDPNDVNCDATAVSDIQTTG FKFIKITSASNVINHADGTNKFPWPPGSYNGSDIDGVVARELQ >Mature_283_residues MKTNPLFLLSFLICLWTFSCKPSASSSDETLAALIPLLGASANANVCPKSPLPSDILLANTIVSAEANVSGFSDPNKAIN GVCGAGELVGSLDVYALEISGSGASMILSWGGRTVKNVPDSIDFIVYDNSFRVSGDTNTYAMDPSVIQVSLDGSKYCGFN PSYTAGNINLMTNWLKFGGLRPVYYNMTTNPLSNEDLFIVTGGTFLLGGGDGFDLQNLDENDPNDVNCDATAVSDIQTTG FKFIKITSASNVINHADGTNKFPWPPGSYNGSDIDGVVARELQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29944; Mature: 29944
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNPLFLLSFLICLWTFSCKPSASSSDETLAALIPLLGASANANVCPKSPLPSDILLAN CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE TIVSAEANVSGFSDPNKAINGVCGAGELVGSLDVYALEISGSGASMILSWGGRTVKNVPD EEEECCCCCCCCCCCHHHHCCCCCCCHHHCCEEEEEEEECCCCCEEEEECCCCEECCCCC SIDFIVYDNSFRVSGDTNTYAMDPSVIQVSLDGSKYCGFNPSYTAGNINLMTNWLKFGGL CEEEEEECCEEEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHCCC RPVYYNMTTNPLSNEDLFIVTGGTFLLGGGDGFDLQNLDENDPNDVNCDATAVSDIQTTG CEEEEEEECCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC FKFIKITSASNVINHADGTNKFPWPPGSYNGSDIDGVVARELQ EEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCC >Mature Secondary Structure MKTNPLFLLSFLICLWTFSCKPSASSSDETLAALIPLLGASANANVCPKSPLPSDILLAN CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE TIVSAEANVSGFSDPNKAINGVCGAGELVGSLDVYALEISGSGASMILSWGGRTVKNVPD EEEECCCCCCCCCCCHHHHCCCCCCCHHHCCEEEEEEEECCCCCEEEEECCCCEECCCCC SIDFIVYDNSFRVSGDTNTYAMDPSVIQVSLDGSKYCGFNPSYTAGNINLMTNWLKFGGL CEEEEEECCEEEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHCCC RPVYYNMTTNPLSNEDLFIVTGGTFLLGGGDGFDLQNLDENDPNDVNCDATAVSDIQTTG CEEEEEEECCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC FKFIKITSASNVINHADGTNKFPWPPGSYNGSDIDGVVARELQ EEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA