| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222384
Identifier: 183222384
GI number: 183222384
Start: 3153350
End: 3153979
Strand: Direct
Name: 183222384
Synonym: LEPBI_I3038
Alternate gene names: NA
Gene position: 3153350-3153979 (Clockwise)
Preceding gene: 183222382
Following gene: 183222385
Centisome position: 87.6
GC content: 40.0
Gene sequence:
>630_bases ATGAAACCAATCACTTTCAAGTCACTTGTCCTTCTCGGACTCTGCTTTCAATTCACCGCTTGCCAAATGGAAAAACAAGT TCCAGAATCGGATTCGGAAAAAAATTTACTCGTGGGTTTACTTGCAGGAAGTGCACTTTCCACTTCGTTTTTATTGGAAT ACAATGGTCAATGGAACGCAGGTTTTACTTATAATGCAAGCGGCCAACTAACAGGAACACCTTCGGGAAGACTCATCATC GCAACTAACCCAGATGGTTCAGGGAGTATCATTTCAGGATTTGAAAAGAATAGTGATTACTTTGGTGGTGGAGATACAAC GTATCGGATTTTATCATTCGAAAAATCCACAAGACGATTGTATTACCAAAATACCCCAGGTGGAAATAACTTTTCCAATT CTACATTTGGTCGAATTGATTACACGGCAGTGACCACTTCTGGTTGTGAACTTGGTGCATCCAAATGTTTTTATTTTTGT GAAGCTGTTTCTGGAAAGGCAACATATGCAGAAGTTTTGAATAGCGCAGTCACAAGTAACCCTACTAATTTTTCATCGAA TGGATGTGGGGGATTTACATTTAGTCGGGCACTTTCCAGAACCGAAAACTCAACTTGGACTGGACTTTAA
Upstream 100 bases:
>100_bases TACAATGTTGATTTAGGAATTTGGATTCAAATTCGATCAATCCATTCGTTGTCATCCTTTGGCTCGGAGTTCCCTAATCA TTTAAATTTAGGAAACGTTT
Downstream 100 bases:
>100_bases ACAGAATTTTTGTAAATTGGAAAGGAAACCACAACTGTTATGAAAACAAACCCACTCTTTTTACTTTCATTCCTTATTTG TTTGTGGACCTTTTCATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKPITFKSLVLLGLCFQFTACQMEKQVPESDSEKNLLVGLLAGSALSTSFLLEYNGQWNAGFTYNASGQLTGTPSGRLII ATNPDGSGSIISGFEKNSDYFGGGDTTYRILSFEKSTRRLYYQNTPGGNNFSNSTFGRIDYTAVTTSGCELGASKCFYFC EAVSGKATYAEVLNSAVTSNPTNFSSNGCGGFTFSRALSRTENSTWTGL
Sequences:
>Translated_209_residues MKPITFKSLVLLGLCFQFTACQMEKQVPESDSEKNLLVGLLAGSALSTSFLLEYNGQWNAGFTYNASGQLTGTPSGRLII ATNPDGSGSIISGFEKNSDYFGGGDTTYRILSFEKSTRRLYYQNTPGGNNFSNSTFGRIDYTAVTTSGCELGASKCFYFC EAVSGKATYAEVLNSAVTSNPTNFSSNGCGGFTFSRALSRTENSTWTGL >Mature_209_residues MKPITFKSLVLLGLCFQFTACQMEKQVPESDSEKNLLVGLLAGSALSTSFLLEYNGQWNAGFTYNASGQLTGTPSGRLII ATNPDGSGSIISGFEKNSDYFGGGDTTYRILSFEKSTRRLYYQNTPGGNNFSNSTFGRIDYTAVTTSGCELGASKCFYFC EAVSGKATYAEVLNSAVTSNPTNFSSNGCGGFTFSRALSRTENSTWTGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22414; Mature: 22414
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPITFKSLVLLGLCFQFTACQMEKQVPESDSEKNLLVGLLAGSALSTSFLLEYNGQWNA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCC GFTYNASGQLTGTPSGRLIIATNPDGSGSIISGFEKNSDYFGGGDTTYRILSFEKSTRRL CEEECCCCEEECCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCEE YYQNTPGGNNFSNSTFGRIDYTAVTTSGCELGASKCFYFCEAVSGKATYAEVLNSAVTSN EEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC PTNFSSNGCGGFTFSRALSRTENSTWTGL CCCCCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKPITFKSLVLLGLCFQFTACQMEKQVPESDSEKNLLVGLLAGSALSTSFLLEYNGQWNA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCC GFTYNASGQLTGTPSGRLIIATNPDGSGSIISGFEKNSDYFGGGDTTYRILSFEKSTRRL CEEECCCCEEECCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCEE YYQNTPGGNNFSNSTFGRIDYTAVTTSGCELGASKCFYFCEAVSGKATYAEVLNSAVTSN EEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC PTNFSSNGCGGFTFSRALSRTENSTWTGL CCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA