Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183222360

Identifier: 183222360

GI number: 183222360

Start: 3127581

End: 3127985

Strand: Direct

Name: 183222360

Synonym: LEPBI_I3013

Alternate gene names: NA

Gene position: 3127581-3127985 (Clockwise)

Preceding gene: 183222359

Following gene: 183222361

Centisome position: 86.89

GC content: 33.58

Gene sequence:

>405_bases
ATGGGAAACCAAGAAGTACGGAGTTACCTTGTGAAAAAAAATATTTTTTTGATTTTAATAATCGTATTATCGATGTTTGT
TTCAAATTGCGCTTCATCCTCAGTTGGAATCGCAACTAGCAATAAACCGATACCAAATACTCCTTACGAAACAATCAAAA
CTGTAGATAAAACCTTTACTTGGTATACATTCGATATCATTTTATTTGGGGTACCTATCTCCGAACCACCTGTAGCCAAT
TTGTATGAAAAACTGTTAGAAGAAGAATCTGGTGACGCACTTGTGAACATCCGTTACTGGAACGATAAATCAATTTTTGG
ACCAATCACTAGGTATCGTTTTAATATCAAAGGTGATTTGGTAAAATTTTCAAATTCACCAGTTCAAACAAAGTCCAAAA
AGTAA

Upstream 100 bases:

>100_bases
CTCTAAATTTTCCGATTCACTCCCCTATAGGTAGCGTTCATTCCCAATCAAGTAGGGAACATAGAATCTACGAATTATTC
CATTGACGTTCCGATCCTAA

Downstream 100 bases:

>100_bases
TCAGAGAAATTGATGATGAATTTTAATAAAATAACATTGGTTTGTGTTTTGATCGGAATACTCAGCTTAGTTGGGTGCAT
CGGTTCACATGTTCCAAAAG

Product: putative signal peptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MGNQEVRSYLVKKNIFLILIIVLSMFVSNCASSSVGIATSNKPIPNTPYETIKTVDKTFTWYTFDIILFGVPISEPPVAN
LYEKLLEEESGDALVNIRYWNDKSIFGPITRYRFNIKGDLVKFSNSPVQTKSKK

Sequences:

>Translated_134_residues
MGNQEVRSYLVKKNIFLILIIVLSMFVSNCASSSVGIATSNKPIPNTPYETIKTVDKTFTWYTFDIILFGVPISEPPVAN
LYEKLLEEESGDALVNIRYWNDKSIFGPITRYRFNIKGDLVKFSNSPVQTKSKK
>Mature_133_residues
GNQEVRSYLVKKNIFLILIIVLSMFVSNCASSSVGIATSNKPIPNTPYETIKTVDKTFTWYTFDIILFGVPISEPPVANL
YEKLLEEESGDALVNIRYWNDKSIFGPITRYRFNIKGDLVKFSNSPVQTKSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15204; Mature: 15073

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNQEVRSYLVKKNIFLILIIVLSMFVSNCASSSVGIATSNKPIPNTPYETIKTVDKTFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHH
WYTFDIILFGVPISEPPVANLYEKLLEEESGDALVNIRYWNDKSIFGPITRYRFNIKGDL
HEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHEEECCCCCE
VKFSNSPVQTKSKK
EEECCCCCCCCCCC
>Mature Secondary Structure 
GNQEVRSYLVKKNIFLILIIVLSMFVSNCASSSVGIATSNKPIPNTPYETIKTVDKTFT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHH
WYTFDIILFGVPISEPPVANLYEKLLEEESGDALVNIRYWNDKSIFGPITRYRFNIKGDL
HEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHEEECCCCCE
VKFSNSPVQTKSKK
EEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA