Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183222273

Identifier: 183222273

GI number: 183222273

Start: 3021490

End: 3022971

Strand: Direct

Name: 183222273

Synonym: LEPBI_I2924

Alternate gene names: NA

Gene position: 3021490-3022971 (Clockwise)

Preceding gene: 183222272

Following gene: 183222276

Centisome position: 83.94

GC content: 40.76

Gene sequence:

>1482_bases
ATGGACGTAAAAAATGCACCGGACTTCAATCCGGAACGGGGACTCAAGATCCAAATCTCCGAGGATCGTTTGACTGCAAC
TTTGGTGGTAAAACCGATTTGGCTGTTAGGTGGTTCTATGAGCAATATTCTCATTTATGAGGCACTTGATAATGCAACCA
TTCATAGAGACCGCATTTTGATGAAAGATGTGGACCTGGCCGCTCTTGAAATCGAAAAAATTTTAAAAGATCCCACAAAG
GTAAAAGAAGAATTTACATTCGTTGTTGGCAAGGGAATTCCCGCAAAACAAGGAGAAAGTGGTTGGGTCAAATTTTATTT
CCCAAGAGCCCAACGTGTTGTGTTAAAAGATGATGGATCTGCCGATTTTCGTAATATCAATAAATATGTTCACGTCAAAG
AAGGGGAAAAACTTGCCACTTTATTTGAAGGCATCGCCGGAGAACAAGGGATAGATGTGATTGGCAATCCCATTTACCCC
AATCCCATCGACAGACCAAGACTCACTCTTGGAAAAAATGTTTTACCGAAAACCATCGATGATCCTGAGAAACCAGGAAG
ACAATTAAAAGAATACTTTGCATCTCTTAGTGGAGTAGTTTTCTCCACAGACACTTCGCTTACGGTTTCTCCTGAGCTCA
ATATTGAAAGTAACATTGGACTCGGAACAGGGAATATCAATTTTGAAGGGACCATCCGAGTGAAAGGAACCATTGAAGAA
GGCGCCGTTGTCAACTGCCAAGGTTCTCTTTATTTAGATGGGAACGTTGAATCATCGGATGTGATTGTTGGTGAAGACTT
AGAAGTCAAAGGTGGCGTCAAAGCCAAAGGTAGAGGTGTCATCCGAATCAAAGGAGACCTTCGCGCGAAATTCATCGAAA
ATGCCAATTTGGAAATTGATGGCGATTGTATCATTGAAAACTTTATTTTAGGAAGTCGAATCCTTTGTCTTGGAAATATC
ATACTCACAGGGGAAACATCTTCTATCATTGGAAGTGATCTCATTTCTTACCAAGGGATCACGGTATCATCACTCGGTTC
GTCTGCACAAATGGATACTGTGGTGGAAGTTGGTTTTCATTATAAAAATGACCGACTGCTCACAGAAGGGAGTTCTCGTC
TTTCTGATATGGAAAAAGAATTAGAAGCCCTAGTCCCTGAAATCCAAAAGATCAAAGAAGTGGTCCAACGTTCTCGTGGT
AAGATTGATGAAGCGAGAAAAGAAAAGTTCAAAGAAATCTTTGATGCCTATCAGAAAAAAAACAAAACCGTTGAATTATT
AAAATCCAAAATTGAAGAACTCAAAGGGGCTCGTTACAACCAAGACAATGTGAAAGTTGTGGTTCGAAACACAGCCCATC
CTGGCGCCGTGATCAAATATAGAAGGCAAGTGGAAAAAATCACGAAGGCACAATCTTCGTTTGTGATGAATTTTTTCCCG
AACCAAGATAAGGCGATGCTCACAGCCTTCAAAGGTAAGTAA

Upstream 100 bases:

>100_bases
GCTCTACTCCAAACTTTTGGTAGTTTTCTGCACTGGCTCGATCGATAACACTACAGAAATTGTCGTTTCTCCTAAAAAAA
CTGCCGATACTATTGTCAGA

Downstream 100 bases:

>100_bases
ATAAAGGCAAACATACGTTAGCCTTCATTGATACAATCGAATCTGCTATTGGGAATTTTCTAGTCTAGTCTGGTACAATC
TAATCTAATTTAGCCTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Two-Component Fusion Protein

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MDVKNAPDFNPERGLKIQISEDRLTATLVVKPIWLLGGSMSNILIYEALDNATIHRDRILMKDVDLAALEIEKILKDPTK
VKEEFTFVVGKGIPAKQGESGWVKFYFPRAQRVVLKDDGSADFRNINKYVHVKEGEKLATLFEGIAGEQGIDVIGNPIYP
NPIDRPRLTLGKNVLPKTIDDPEKPGRQLKEYFASLSGVVFSTDTSLTVSPELNIESNIGLGTGNINFEGTIRVKGTIEE
GAVVNCQGSLYLDGNVESSDVIVGEDLEVKGGVKAKGRGVIRIKGDLRAKFIENANLEIDGDCIIENFILGSRILCLGNI
ILTGETSSIIGSDLISYQGITVSSLGSSAQMDTVVEVGFHYKNDRLLTEGSSRLSDMEKELEALVPEIQKIKEVVQRSRG
KIDEARKEKFKEIFDAYQKKNKTVELLKSKIEELKGARYNQDNVKVVVRNTAHPGAVIKYRRQVEKITKAQSSFVMNFFP
NQDKAMLTAFKGK

Sequences:

>Translated_493_residues
MDVKNAPDFNPERGLKIQISEDRLTATLVVKPIWLLGGSMSNILIYEALDNATIHRDRILMKDVDLAALEIEKILKDPTK
VKEEFTFVVGKGIPAKQGESGWVKFYFPRAQRVVLKDDGSADFRNINKYVHVKEGEKLATLFEGIAGEQGIDVIGNPIYP
NPIDRPRLTLGKNVLPKTIDDPEKPGRQLKEYFASLSGVVFSTDTSLTVSPELNIESNIGLGTGNINFEGTIRVKGTIEE
GAVVNCQGSLYLDGNVESSDVIVGEDLEVKGGVKAKGRGVIRIKGDLRAKFIENANLEIDGDCIIENFILGSRILCLGNI
ILTGETSSIIGSDLISYQGITVSSLGSSAQMDTVVEVGFHYKNDRLLTEGSSRLSDMEKELEALVPEIQKIKEVVQRSRG
KIDEARKEKFKEIFDAYQKKNKTVELLKSKIEELKGARYNQDNVKVVVRNTAHPGAVIKYRRQVEKITKAQSSFVMNFFP
NQDKAMLTAFKGK
>Mature_493_residues
MDVKNAPDFNPERGLKIQISEDRLTATLVVKPIWLLGGSMSNILIYEALDNATIHRDRILMKDVDLAALEIEKILKDPTK
VKEEFTFVVGKGIPAKQGESGWVKFYFPRAQRVVLKDDGSADFRNINKYVHVKEGEKLATLFEGIAGEQGIDVIGNPIYP
NPIDRPRLTLGKNVLPKTIDDPEKPGRQLKEYFASLSGVVFSTDTSLTVSPELNIESNIGLGTGNINFEGTIRVKGTIEE
GAVVNCQGSLYLDGNVESSDVIVGEDLEVKGGVKAKGRGVIRIKGDLRAKFIENANLEIDGDCIIENFILGSRILCLGNI
ILTGETSSIIGSDLISYQGITVSSLGSSAQMDTVVEVGFHYKNDRLLTEGSSRLSDMEKELEALVPEIQKIKEVVQRSRG
KIDEARKEKFKEIFDAYQKKNKTVELLKSKIEELKGARYNQDNVKVVVRNTAHPGAVIKYRRQVEKITKAQSSFVMNFFP
NQDKAMLTAFKGK

Specific function: Unknown

COG id: COG1315

COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54595; Mature: 54595

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKNAPDFNPERGLKIQISEDRLTATLVVKPIWLLGGSMSNILIYEALDNATIHRDRIL
CCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEHHHHCCCCCCEEEEEECCCCEEECCEEE
MKDVDLAALEIEKILKDPTKVKEEFTFVVGKGIPAKQGESGWVKFYFPRAQRVVLKDDGS
EECCCHHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCC
ADFRNINKYVHVKEGEKLATLFEGIAGEQGIDVIGNPIYPNPIDRPRLTLGKNVLPKTID
CCHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
DPEKPGRQLKEYFASLSGVVFSTDTSLTVSPELNIESNIGLGTGNINFEGTIRVKGTIEE
CCCCCHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECC
GAVVNCQGSLYLDGNVESSDVIVGEDLEVKGGVKAKGRGVIRIKGDLRAKFIENANLEID
CCEEEECCEEEECCCCCCCCEEECCCEEECCCCCCCCCEEEEEECCCEEEHHCCCCEEEC
GDCIIENFILGSRILCLGNIILTGETSSIIGSDLISYQGITVSSLGSSAQMDTVVEVGFH
CCHHEEHHHHCCEEEEECCEEEECCCHHHHHHHHHHCCCEEHCCCCCCCCHHHEEEECEE
YKNDRLLTEGSSRLSDMEKELEALVPEIQKIKEVVQRSRGKIDEARKEKFKEIFDAYQKK
ECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
NKTVELLKSKIEELKGARYNQDNVKVVVRNTAHPGAVIKYRRQVEKITKAQSSFVMNFFP
CCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEEECC
NQDKAMLTAFKGK
CCCCEEEEEECCC
>Mature Secondary Structure
MDVKNAPDFNPERGLKIQISEDRLTATLVVKPIWLLGGSMSNILIYEALDNATIHRDRIL
CCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEHHHHCCCCCCEEEEEECCCCEEECCEEE
MKDVDLAALEIEKILKDPTKVKEEFTFVVGKGIPAKQGESGWVKFYFPRAQRVVLKDDGS
EECCCHHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCC
ADFRNINKYVHVKEGEKLATLFEGIAGEQGIDVIGNPIYPNPIDRPRLTLGKNVLPKTID
CCHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
DPEKPGRQLKEYFASLSGVVFSTDTSLTVSPELNIESNIGLGTGNINFEGTIRVKGTIEE
CCCCCHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECC
GAVVNCQGSLYLDGNVESSDVIVGEDLEVKGGVKAKGRGVIRIKGDLRAKFIENANLEID
CCEEEECCEEEECCCCCCCCEEECCCEEECCCCCCCCCEEEEEECCCEEEHHCCCCEEEC
GDCIIENFILGSRILCLGNIILTGETSSIIGSDLISYQGITVSSLGSSAQMDTVVEVGFH
CCHHEEHHHHCCEEEEECCEEEECCCHHHHHHHHHHCCCEEHCCCCCCCCHHHEEEECEE
YKNDRLLTEGSSRLSDMEKELEALVPEIQKIKEVVQRSRGKIDEARKEKFKEIFDAYQKK
ECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
NKTVELLKSKIEELKGARYNQDNVKVVVRNTAHPGAVIKYRRQVEKITKAQSSFVMNFFP
CCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEEECC
NQDKAMLTAFKGK
CCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA