| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222273
Identifier: 183222273
GI number: 183222273
Start: 3021490
End: 3022971
Strand: Direct
Name: 183222273
Synonym: LEPBI_I2924
Alternate gene names: NA
Gene position: 3021490-3022971 (Clockwise)
Preceding gene: 183222272
Following gene: 183222276
Centisome position: 83.94
GC content: 40.76
Gene sequence:
>1482_bases ATGGACGTAAAAAATGCACCGGACTTCAATCCGGAACGGGGACTCAAGATCCAAATCTCCGAGGATCGTTTGACTGCAAC TTTGGTGGTAAAACCGATTTGGCTGTTAGGTGGTTCTATGAGCAATATTCTCATTTATGAGGCACTTGATAATGCAACCA TTCATAGAGACCGCATTTTGATGAAAGATGTGGACCTGGCCGCTCTTGAAATCGAAAAAATTTTAAAAGATCCCACAAAG GTAAAAGAAGAATTTACATTCGTTGTTGGCAAGGGAATTCCCGCAAAACAAGGAGAAAGTGGTTGGGTCAAATTTTATTT CCCAAGAGCCCAACGTGTTGTGTTAAAAGATGATGGATCTGCCGATTTTCGTAATATCAATAAATATGTTCACGTCAAAG AAGGGGAAAAACTTGCCACTTTATTTGAAGGCATCGCCGGAGAACAAGGGATAGATGTGATTGGCAATCCCATTTACCCC AATCCCATCGACAGACCAAGACTCACTCTTGGAAAAAATGTTTTACCGAAAACCATCGATGATCCTGAGAAACCAGGAAG ACAATTAAAAGAATACTTTGCATCTCTTAGTGGAGTAGTTTTCTCCACAGACACTTCGCTTACGGTTTCTCCTGAGCTCA ATATTGAAAGTAACATTGGACTCGGAACAGGGAATATCAATTTTGAAGGGACCATCCGAGTGAAAGGAACCATTGAAGAA GGCGCCGTTGTCAACTGCCAAGGTTCTCTTTATTTAGATGGGAACGTTGAATCATCGGATGTGATTGTTGGTGAAGACTT AGAAGTCAAAGGTGGCGTCAAAGCCAAAGGTAGAGGTGTCATCCGAATCAAAGGAGACCTTCGCGCGAAATTCATCGAAA ATGCCAATTTGGAAATTGATGGCGATTGTATCATTGAAAACTTTATTTTAGGAAGTCGAATCCTTTGTCTTGGAAATATC ATACTCACAGGGGAAACATCTTCTATCATTGGAAGTGATCTCATTTCTTACCAAGGGATCACGGTATCATCACTCGGTTC GTCTGCACAAATGGATACTGTGGTGGAAGTTGGTTTTCATTATAAAAATGACCGACTGCTCACAGAAGGGAGTTCTCGTC TTTCTGATATGGAAAAAGAATTAGAAGCCCTAGTCCCTGAAATCCAAAAGATCAAAGAAGTGGTCCAACGTTCTCGTGGT AAGATTGATGAAGCGAGAAAAGAAAAGTTCAAAGAAATCTTTGATGCCTATCAGAAAAAAAACAAAACCGTTGAATTATT AAAATCCAAAATTGAAGAACTCAAAGGGGCTCGTTACAACCAAGACAATGTGAAAGTTGTGGTTCGAAACACAGCCCATC CTGGCGCCGTGATCAAATATAGAAGGCAAGTGGAAAAAATCACGAAGGCACAATCTTCGTTTGTGATGAATTTTTTCCCG AACCAAGATAAGGCGATGCTCACAGCCTTCAAAGGTAAGTAA
Upstream 100 bases:
>100_bases GCTCTACTCCAAACTTTTGGTAGTTTTCTGCACTGGCTCGATCGATAACACTACAGAAATTGTCGTTTCTCCTAAAAAAA CTGCCGATACTATTGTCAGA
Downstream 100 bases:
>100_bases ATAAAGGCAAACATACGTTAGCCTTCATTGATACAATCGAATCTGCTATTGGGAATTTTCTAGTCTAGTCTGGTACAATC TAATCTAATTTAGCCTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Two-Component Fusion Protein
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MDVKNAPDFNPERGLKIQISEDRLTATLVVKPIWLLGGSMSNILIYEALDNATIHRDRILMKDVDLAALEIEKILKDPTK VKEEFTFVVGKGIPAKQGESGWVKFYFPRAQRVVLKDDGSADFRNINKYVHVKEGEKLATLFEGIAGEQGIDVIGNPIYP NPIDRPRLTLGKNVLPKTIDDPEKPGRQLKEYFASLSGVVFSTDTSLTVSPELNIESNIGLGTGNINFEGTIRVKGTIEE GAVVNCQGSLYLDGNVESSDVIVGEDLEVKGGVKAKGRGVIRIKGDLRAKFIENANLEIDGDCIIENFILGSRILCLGNI ILTGETSSIIGSDLISYQGITVSSLGSSAQMDTVVEVGFHYKNDRLLTEGSSRLSDMEKELEALVPEIQKIKEVVQRSRG KIDEARKEKFKEIFDAYQKKNKTVELLKSKIEELKGARYNQDNVKVVVRNTAHPGAVIKYRRQVEKITKAQSSFVMNFFP NQDKAMLTAFKGK
Sequences:
>Translated_493_residues MDVKNAPDFNPERGLKIQISEDRLTATLVVKPIWLLGGSMSNILIYEALDNATIHRDRILMKDVDLAALEIEKILKDPTK VKEEFTFVVGKGIPAKQGESGWVKFYFPRAQRVVLKDDGSADFRNINKYVHVKEGEKLATLFEGIAGEQGIDVIGNPIYP NPIDRPRLTLGKNVLPKTIDDPEKPGRQLKEYFASLSGVVFSTDTSLTVSPELNIESNIGLGTGNINFEGTIRVKGTIEE GAVVNCQGSLYLDGNVESSDVIVGEDLEVKGGVKAKGRGVIRIKGDLRAKFIENANLEIDGDCIIENFILGSRILCLGNI ILTGETSSIIGSDLISYQGITVSSLGSSAQMDTVVEVGFHYKNDRLLTEGSSRLSDMEKELEALVPEIQKIKEVVQRSRG KIDEARKEKFKEIFDAYQKKNKTVELLKSKIEELKGARYNQDNVKVVVRNTAHPGAVIKYRRQVEKITKAQSSFVMNFFP NQDKAMLTAFKGK >Mature_493_residues MDVKNAPDFNPERGLKIQISEDRLTATLVVKPIWLLGGSMSNILIYEALDNATIHRDRILMKDVDLAALEIEKILKDPTK VKEEFTFVVGKGIPAKQGESGWVKFYFPRAQRVVLKDDGSADFRNINKYVHVKEGEKLATLFEGIAGEQGIDVIGNPIYP NPIDRPRLTLGKNVLPKTIDDPEKPGRQLKEYFASLSGVVFSTDTSLTVSPELNIESNIGLGTGNINFEGTIRVKGTIEE GAVVNCQGSLYLDGNVESSDVIVGEDLEVKGGVKAKGRGVIRIKGDLRAKFIENANLEIDGDCIIENFILGSRILCLGNI ILTGETSSIIGSDLISYQGITVSSLGSSAQMDTVVEVGFHYKNDRLLTEGSSRLSDMEKELEALVPEIQKIKEVVQRSRG KIDEARKEKFKEIFDAYQKKNKTVELLKSKIEELKGARYNQDNVKVVVRNTAHPGAVIKYRRQVEKITKAQSSFVMNFFP NQDKAMLTAFKGK
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54595; Mature: 54595
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKNAPDFNPERGLKIQISEDRLTATLVVKPIWLLGGSMSNILIYEALDNATIHRDRIL CCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEHHHHCCCCCCEEEEEECCCCEEECCEEE MKDVDLAALEIEKILKDPTKVKEEFTFVVGKGIPAKQGESGWVKFYFPRAQRVVLKDDGS EECCCHHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCC ADFRNINKYVHVKEGEKLATLFEGIAGEQGIDVIGNPIYPNPIDRPRLTLGKNVLPKTID CCHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC DPEKPGRQLKEYFASLSGVVFSTDTSLTVSPELNIESNIGLGTGNINFEGTIRVKGTIEE CCCCCHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECC GAVVNCQGSLYLDGNVESSDVIVGEDLEVKGGVKAKGRGVIRIKGDLRAKFIENANLEID CCEEEECCEEEECCCCCCCCEEECCCEEECCCCCCCCCEEEEEECCCEEEHHCCCCEEEC GDCIIENFILGSRILCLGNIILTGETSSIIGSDLISYQGITVSSLGSSAQMDTVVEVGFH CCHHEEHHHHCCEEEEECCEEEECCCHHHHHHHHHHCCCEEHCCCCCCCCHHHEEEECEE YKNDRLLTEGSSRLSDMEKELEALVPEIQKIKEVVQRSRGKIDEARKEKFKEIFDAYQKK ECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC NKTVELLKSKIEELKGARYNQDNVKVVVRNTAHPGAVIKYRRQVEKITKAQSSFVMNFFP CCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEEECC NQDKAMLTAFKGK CCCCEEEEEECCC >Mature Secondary Structure MDVKNAPDFNPERGLKIQISEDRLTATLVVKPIWLLGGSMSNILIYEALDNATIHRDRIL CCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEHHHHCCCCCCEEEEEECCCCEEECCEEE MKDVDLAALEIEKILKDPTKVKEEFTFVVGKGIPAKQGESGWVKFYFPRAQRVVLKDDGS EECCCHHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCC ADFRNINKYVHVKEGEKLATLFEGIAGEQGIDVIGNPIYPNPIDRPRLTLGKNVLPKTID CCHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC DPEKPGRQLKEYFASLSGVVFSTDTSLTVSPELNIESNIGLGTGNINFEGTIRVKGTIEE CCCCCHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECC GAVVNCQGSLYLDGNVESSDVIVGEDLEVKGGVKAKGRGVIRIKGDLRAKFIENANLEID CCEEEECCEEEECCCCCCCCEEECCCEEECCCCCCCCCEEEEEECCCEEEHHCCCCEEEC GDCIIENFILGSRILCLGNIILTGETSSIIGSDLISYQGITVSSLGSSAQMDTVVEVGFH CCHHEEHHHHCCEEEEECCEEEECCCHHHHHHHHHHCCCEEHCCCCCCCCHHHEEEECEE YKNDRLLTEGSSRLSDMEKELEALVPEIQKIKEVVQRSRGKIDEARKEKFKEIFDAYQKK ECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC NKTVELLKSKIEELKGARYNQDNVKVVVRNTAHPGAVIKYRRQVEKITKAQSSFVMNFFP CCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEEECC NQDKAMLTAFKGK CCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA