| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222272
Identifier: 183222272
GI number: 183222272
Start: 3020400
End: 3021437
Strand: Direct
Name: 183222272
Synonym: LEPBI_I2923
Alternate gene names: NA
Gene position: 3020400-3021437 (Clockwise)
Preceding gene: 183222271
Following gene: 183222273
Centisome position: 83.91
GC content: 43.45
Gene sequence:
>1038_bases ATGAAACCTTATGTTTTGGCACTCCCACTCATTTTGAGTTATGCAGGACTAAAACAAAAAAAATCTTTAGAACGTAAGGA ATTCACTCTACCTGAAACAGGTAGAAAAACCTATCTTTTTTACCCCAAGGACAAAGATCCAAACTCATTCCCAGGTGTGT ACATCCAACATGGTATGAGTGCCATGGGAATTGATGATCCAAGGATCATTGATCTCGCAGAAAATATCGCAAGTACAGGT CACTCTGTCATTTTACCAGAACTACCTGAAGTCAAAGGACTGAGAATCGAAGCAGAAACCATTACTCACATTCAAAACTT GATGATGGAGATTCACGCAAGCAAACGGTTGTTTGATGGTGAAAATTTAGGATATTTATCCGCTAGTTTTTCTGCTGGAA TGGGACTCATTGCCGCATCCAGGTCCAATACTCGAAACAAAATCAAAACCAGTATGCTCATTGGTGGTTATTGTAATTTT TTTGAAGCGGTTCCTTTTGTATTCTCTCATTATGAAATGGATCCCTATGCCGTGTATGTCATACTCTTCAACATGCTCCA TCGATTTGAACCCGATCTTGCTGAAGAATTAGAAATGGTTTACTATGAAGCAGCCCTTGACAACGGACTCAAACGAATCG GAAACGATGCCAAAACAAGTTCCCGATTAGAAAAAACTTCGAAACGTGCCAAAGAATTTTTCTATCAGGTTCATGCCGAC CGGAGCTTTCGCTTGGATCTCGCCAAACAGGTTCTGGACACTGTTCCGGAAAAACTCCCGGAAACCCTCTCTCCCTTCTA CCAATTGGAAACCTTAGCAGGACCTGTGGCCCTCCTACATGGAAAAACTGACCCGGTGATCTCCGCTACCGAATCGGAAA AACTTGCCTTACTTTTACAGGGAAAAGGGATCCCTTTCGTCCATCGGACTTCGACGGCCCTGACCCACGGGGATAGCCTC CCTCTCCACTCCCAAATCTTTGGGGTACCAGCTCTACTCCAAACTTTTGGTAGTTTTCTGCACTGGCTCGATCGATAA
Upstream 100 bases:
>100_bases GATCTTTAACTTAAAAGACAGGCGTGGGGATGAATACATGGGAAGATTGTACTTGATTTTATTGTTGGAAAAATTCCCTA CTCCCCAAAACTAAAGTCGA
Downstream 100 bases:
>100_bases CACTACAGAAATTGTCGTTTCTCCTAAAAAAACTGCCGATACTATTGTCAGAATGGACGTAAAAAATGCACCGGACTTCA ATCCGGAACGGGGACTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKPYVLALPLILSYAGLKQKKSLERKEFTLPETGRKTYLFYPKDKDPNSFPGVYIQHGMSAMGIDDPRIIDLAENIASTG HSVILPELPEVKGLRIEAETITHIQNLMMEIHASKRLFDGENLGYLSASFSAGMGLIAASRSNTRNKIKTSMLIGGYCNF FEAVPFVFSHYEMDPYAVYVILFNMLHRFEPDLAEELEMVYYEAALDNGLKRIGNDAKTSSRLEKTSKRAKEFFYQVHAD RSFRLDLAKQVLDTVPEKLPETLSPFYQLETLAGPVALLHGKTDPVISATESEKLALLLQGKGIPFVHRTSTALTHGDSL PLHSQIFGVPALLQTFGSFLHWLDR
Sequences:
>Translated_345_residues MKPYVLALPLILSYAGLKQKKSLERKEFTLPETGRKTYLFYPKDKDPNSFPGVYIQHGMSAMGIDDPRIIDLAENIASTG HSVILPELPEVKGLRIEAETITHIQNLMMEIHASKRLFDGENLGYLSASFSAGMGLIAASRSNTRNKIKTSMLIGGYCNF FEAVPFVFSHYEMDPYAVYVILFNMLHRFEPDLAEELEMVYYEAALDNGLKRIGNDAKTSSRLEKTSKRAKEFFYQVHAD RSFRLDLAKQVLDTVPEKLPETLSPFYQLETLAGPVALLHGKTDPVISATESEKLALLLQGKGIPFVHRTSTALTHGDSL PLHSQIFGVPALLQTFGSFLHWLDR >Mature_345_residues MKPYVLALPLILSYAGLKQKKSLERKEFTLPETGRKTYLFYPKDKDPNSFPGVYIQHGMSAMGIDDPRIIDLAENIASTG HSVILPELPEVKGLRIEAETITHIQNLMMEIHASKRLFDGENLGYLSASFSAGMGLIAASRSNTRNKIKTSMLIGGYCNF FEAVPFVFSHYEMDPYAVYVILFNMLHRFEPDLAEELEMVYYEAALDNGLKRIGNDAKTSSRLEKTSKRAKEFFYQVHAD RSFRLDLAKQVLDTVPEKLPETLSPFYQLETLAGPVALLHGKTDPVISATESEKLALLLQGKGIPFVHRTSTALTHGDSL PLHSQIFGVPALLQTFGSFLHWLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38715; Mature: 38715
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPYVLALPLILSYAGLKQKKSLERKEFTLPETGRKTYLFYPKDKDPNSFPGVYIQHGMS CCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCC AMGIDDPRIIDLAENIASTGHSVILPELPEVKGLRIEAETITHIQNLMMEIHASKRLFDG CCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC ENLGYLSASFSAGMGLIAASRSNTRNKIKTSMLIGGYCNFFEAVPFVFSHYEMDPYAVYV CCCCEEECHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ILFNMLHRFEPDLAEELEMVYYEAALDNGLKRIGNDAKTSSRLEKTSKRAKEFFYQVHAD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC RSFRLDLAKQVLDTVPEKLPETLSPFYQLETLAGPVALLHGKTDPVISATESEKLALLLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEECCCCCCEEEEEE GKGIPFVHRTSTALTHGDSLPLHSQIFGVPALLQTFGSFLHWLDR CCCCCEEEECCHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKPYVLALPLILSYAGLKQKKSLERKEFTLPETGRKTYLFYPKDKDPNSFPGVYIQHGMS CCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCC AMGIDDPRIIDLAENIASTGHSVILPELPEVKGLRIEAETITHIQNLMMEIHASKRLFDG CCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC ENLGYLSASFSAGMGLIAASRSNTRNKIKTSMLIGGYCNFFEAVPFVFSHYEMDPYAVYV CCCCEEECHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ILFNMLHRFEPDLAEELEMVYYEAALDNGLKRIGNDAKTSSRLEKTSKRAKEFFYQVHAD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC RSFRLDLAKQVLDTVPEKLPETLSPFYQLETLAGPVALLHGKTDPVISATESEKLALLLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEECCCCCCEEEEEE GKGIPFVHRTSTALTHGDSLPLHSQIFGVPALLQTFGSFLHWLDR CCCCCEEEECCHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA