| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222101
Identifier: 183222101
GI number: 183222101
Start: 2834162
End: 2835589
Strand: Direct
Name: 183222101
Synonym: LEPBI_I2743
Alternate gene names: NA
Gene position: 2834162-2835589 (Clockwise)
Preceding gene: 183222099
Following gene: 183222102
Centisome position: 78.73
GC content: 32.7
Gene sequence:
>1428_bases ATGATCCAGACAAAAAAAGCAATTGGTTTCTTTTATGGTTTAGGTTTTTTAACATTCTCTTACCTGTTTATCAAAACAAT TCAGATTGTATCTTTTTCAGATTTTTCGCTCTTCGAATGGCAACTAAAACAAACTTTCCAAGGATCATTACAACTTCCTT ATCCTTTTATCAGAACAGACCCAAGTTTAGAATTTTTCCCTTTACCCAATTTATTTTTTCACCTAACAAATAATCGAATC GATTCCACGTTTCCAAACTTATACCCAATTTTGTTATCTCCAATATTTCATTTTTTTGGTAGGGTTGGATTACAAATCAC CCAACTTCTTCTTTTTTTTCTATCTCTATGGCTGTTTTTCCAAATGAAACGAGACCACTTCTTAACCTTATTACTCATGT TTGGTGCTTCTATCCCTATTTATACCAACTTAATACACGATACAATATTGATATTTTTTTTAGAGATTTTACTTTTTTAT GTTCTTCATAAAAAACTCATCTCAATAGCTTCATTTATCACGGTTACTTTGGTCTGGATGAGGCCAGAAATGGTATTTCT GATTCTCCTTCTTCCATTTTACTTTGAATGGGAAACCATTTGGAAAAAGTATATTGTCTGGTTACTTGCGATCGGAATTT GTTTTGTTTGTATCAACTATTCCTTTTTTGGAACGGTTTTACCACTGAGAATCTTCAAAAACGGTAACTTCAAATGGAAT TTGGAAATTTGTATTTATTTATTACGATTGCTTTTGGAACAGATTCCGATCTTTACTCTTTTTTTAATTCTTAGCCTTTA CCAATGGTTTCAGAAGCAGAAATCATTTCACTCTCTGGCATTAATCTTCATAACTGCTCTCGTCATAATATTGTCACCTA ACACAGGTGGGCATAACACTCCACGGTATTTATATTTTCTTACTCCTTTTTATTTATTTTCCATTCATCAAATCGTTAAA AATAATTTGGTCAAAGAATGGAAATGGATGATCACCACCCTATTGATAAGCTTCTATTCGATTTACCAGCTGAATTACCA AACAAAAGAAATCATTAAAATTTCAAAATTCCAATCCAATACATTGTCTGCATTGAAAGAGATCCCAGAACAAACACTCG TATTCAATAATTCAGATTTTTCATTTGTGGCCATTCCCCTCTTGTATCAAAATAAAAATTTGATCTTACTCCGAAAATCG CCTGAAGAGTCGGGTTTTAGCAGTTTTCTTACATTAAACAAAATCAATTCGTTTGTATTTGTGGAATTGCCTCCTTCCCC ATATGAAATCCCCAATCCACTTTTGATTTCCAATTGCAGTTCCAATTGCAAATACACTCGAATCAAAACCTCCGCATTAC CAAACACAATGTTACCCATTATCATTTCTACTTACCATCGAAATGGGGACTCGGAAACAAATTTCTGA
Upstream 100 bases:
>100_bases TACAGCAGCCTTGTTAAATCGATTTCCATTTCCATACTTGATTACTTTTTTCATTGCTGTTACTTGGATCTTTTCCAGAA TGTGTTAGTTTCGATAAGTC
Downstream 100 bases:
>100_bases CTTGATTTCTAAATTGATACTGACTAGAGTAGAAGCGGAATAAAAATGACTCAACCAAACCAATGCCCTAGCTGTGGTAG TACAAATATTTATCGAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MIQTKKAIGFFYGLGFLTFSYLFIKTIQIVSFSDFSLFEWQLKQTFQGSLQLPYPFIRTDPSLEFFPLPNLFFHLTNNRI DSTFPNLYPILLSPIFHFFGRVGLQITQLLLFFLSLWLFFQMKRDHFLTLLLMFGASIPIYTNLIHDTILIFFLEILLFY VLHKKLISIASFITVTLVWMRPEMVFLILLLPFYFEWETIWKKYIVWLLAIGICFVCINYSFFGTVLPLRIFKNGNFKWN LEICIYLLRLLLEQIPIFTLFLILSLYQWFQKQKSFHSLALIFITALVIILSPNTGGHNTPRYLYFLTPFYLFSIHQIVK NNLVKEWKWMITTLLISFYSIYQLNYQTKEIIKISKFQSNTLSALKEIPEQTLVFNNSDFSFVAIPLLYQNKNLILLRKS PEESGFSSFLTLNKINSFVFVELPPSPYEIPNPLLISNCSSNCKYTRIKTSALPNTMLPIIISTYHRNGDSETNF
Sequences:
>Translated_475_residues MIQTKKAIGFFYGLGFLTFSYLFIKTIQIVSFSDFSLFEWQLKQTFQGSLQLPYPFIRTDPSLEFFPLPNLFFHLTNNRI DSTFPNLYPILLSPIFHFFGRVGLQITQLLLFFLSLWLFFQMKRDHFLTLLLMFGASIPIYTNLIHDTILIFFLEILLFY VLHKKLISIASFITVTLVWMRPEMVFLILLLPFYFEWETIWKKYIVWLLAIGICFVCINYSFFGTVLPLRIFKNGNFKWN LEICIYLLRLLLEQIPIFTLFLILSLYQWFQKQKSFHSLALIFITALVIILSPNTGGHNTPRYLYFLTPFYLFSIHQIVK NNLVKEWKWMITTLLISFYSIYQLNYQTKEIIKISKFQSNTLSALKEIPEQTLVFNNSDFSFVAIPLLYQNKNLILLRKS PEESGFSSFLTLNKINSFVFVELPPSPYEIPNPLLISNCSSNCKYTRIKTSALPNTMLPIIISTYHRNGDSETNF >Mature_475_residues MIQTKKAIGFFYGLGFLTFSYLFIKTIQIVSFSDFSLFEWQLKQTFQGSLQLPYPFIRTDPSLEFFPLPNLFFHLTNNRI DSTFPNLYPILLSPIFHFFGRVGLQITQLLLFFLSLWLFFQMKRDHFLTLLLMFGASIPIYTNLIHDTILIFFLEILLFY VLHKKLISIASFITVTLVWMRPEMVFLILLLPFYFEWETIWKKYIVWLLAIGICFVCINYSFFGTVLPLRIFKNGNFKWN LEICIYLLRLLLEQIPIFTLFLILSLYQWFQKQKSFHSLALIFITALVIILSPNTGGHNTPRYLYFLTPFYLFSIHQIVK NNLVKEWKWMITTLLISFYSIYQLNYQTKEIIKISKFQSNTLSALKEIPEQTLVFNNSDFSFVAIPLLYQNKNLILLRKS PEESGFSSFLTLNKINSFVFVELPPSPYEIPNPLLISNCSSNCKYTRIKTSALPNTMLPIIISTYHRNGDSETNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55978; Mature: 55978
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQTKKAIGFFYGLGFLTFSYLFIKTIQIVSFSDFSLFEWQLKQTFQGSLQLPYPFIRTD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCEECCC PSLEFFPLPNLFFHLTNNRIDSTFPNLYPILLSPIFHFFGRVGLQITQLLLFFLSLWLFF CCCEEEECCHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMKRDHFLTLLLMFGASIPIYTNLIHDTILIFFLEILLFYVLHKKLISIASFITVTLVWM HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPEMVFLILLLPFYFEWETIWKKYIVWLLAIGICFVCINYSFFGTVLPLRIFKNGNFKWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEE LEICIYLLRLLLEQIPIFTLFLILSLYQWFQKQKSFHSLALIFITALVIILSPNTGGHNT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC PRYLYFLTPFYLFSIHQIVKNNLVKEWKWMITTLLISFYSIYQLNYQTKEIIKISKFQSN CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHH TLSALKEIPEQTLVFNNSDFSFVAIPLLYQNKNLILLRKSPEESGFSSFLTLNKINSFVF HHHHHHHCCHHHEEECCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCEEE VELPPSPYEIPNPLLISNCSSNCKYTRIKTSALPNTMLPIIISTYHRNGDSETNF EEECCCCCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIQTKKAIGFFYGLGFLTFSYLFIKTIQIVSFSDFSLFEWQLKQTFQGSLQLPYPFIRTD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCEECCC PSLEFFPLPNLFFHLTNNRIDSTFPNLYPILLSPIFHFFGRVGLQITQLLLFFLSLWLFF CCCEEEECCHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMKRDHFLTLLLMFGASIPIYTNLIHDTILIFFLEILLFYVLHKKLISIASFITVTLVWM HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPEMVFLILLLPFYFEWETIWKKYIVWLLAIGICFVCINYSFFGTVLPLRIFKNGNFKWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEE LEICIYLLRLLLEQIPIFTLFLILSLYQWFQKQKSFHSLALIFITALVIILSPNTGGHNT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC PRYLYFLTPFYLFSIHQIVKNNLVKEWKWMITTLLISFYSIYQLNYQTKEIIKISKFQSN CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHH TLSALKEIPEQTLVFNNSDFSFVAIPLLYQNKNLILLRKSPEESGFSSFLTLNKINSFVF HHHHHHHCCHHHEEECCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCEEE VELPPSPYEIPNPLLISNCSSNCKYTRIKTSALPNTMLPIIISTYHRNGDSETNF EEECCCCCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA