| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is thiE
Identifier: 183222073
GI number: 183222073
Start: 2810312
End: 2810944
Strand: Direct
Name: thiE
Synonym: LEPBI_I2715
Alternate gene names: 183222073
Gene position: 2810312-2810944 (Clockwise)
Preceding gene: 183222072
Following gene: 183222075
Centisome position: 78.07
GC content: 46.76
Gene sequence:
>633_bases ATGCAAAATAAAATCCAAGGGGTGTATCTTGTCACAGATAGACCCCTTTGCCTCCACCATAAACTGGAAGAAGTGGTGCA AATGGCCGCTTCTGGTGGAGTTTCCCTTGTCCAACTCAGGGAAAAGGATTCCACCTCTCGTGAATTTTTAGAACTTGCCA TCCACCTAAAATTCATCCTAAGCCCCTTCCAAGTCCCCCTCCTCATCAATGACCGAGTGGATCTGTGTTTGGCATCAGGT GCCGATGGGGTCCACCTAGGGCAAACAGACCTTCCTTGGTTAGAAGCAAGGCGGATCCTCGGAAAGGACGCCATCATTGG ACTCTCCATTGAAACAAAAGAAGACTTTGCCACACTGACAAAAGAAGATCCAAATCCTCAATTGGAGTATTTGGCAGTAT CCCCTGTGTTTGATACACCCACTAAAACCAATACCAAAGAAGCACTAGGACTAGCAGGCGTTCGCTGGCTAAAAGAAAAA ACAGACATTCCCGTTGTGGCCATAGGTGGCATCAACATTTCCAATGCAAAGGATGTGATTGGCGCGGGGGCCGATATGAT TGCCGTTGTCAGTGCGATTTGTTCAGCTAAAAACCCAAAAGAAGCGACTGTAGCCTTACGAAATCAATTCTAA
Upstream 100 bases:
>100_bases GAAATGGCAAAATCCAAAACGGCAAGTCCTGGCAGTTTCCAAGTGGCATTCCTTGATGCCCTGTATGAACTGAATGCAGA TACCATTAAACAAAAGTTAA
Downstream 100 bases:
>100_bases GAATTTTTTTTTGTCACTTGGTTTCGGTTCCAAATGGAGACACCGATCCGTTCGATGGGAGAATTCTCAAAGTATTCCTT AAATTCCGCTTCCGATAAAA
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MQNKIQGVYLVTDRPLCLHHKLEEVVQMAASGGVSLVQLREKDSTSREFLELAIHLKFILSPFQVPLLINDRVDLCLASG ADGVHLGQTDLPWLEARRILGKDAIIGLSIETKEDFATLTKEDPNPQLEYLAVSPVFDTPTKTNTKEALGLAGVRWLKEK TDIPVVAIGGINISNAKDVIGAGADMIAVVSAICSAKNPKEATVALRNQF
Sequences:
>Translated_210_residues MQNKIQGVYLVTDRPLCLHHKLEEVVQMAASGGVSLVQLREKDSTSREFLELAIHLKFILSPFQVPLLINDRVDLCLASG ADGVHLGQTDLPWLEARRILGKDAIIGLSIETKEDFATLTKEDPNPQLEYLAVSPVFDTPTKTNTKEALGLAGVRWLKEK TDIPVVAIGGINISNAKDVIGAGADMIAVVSAICSAKNPKEATVALRNQF >Mature_210_residues MQNKIQGVYLVTDRPLCLHHKLEEVVQMAASGGVSLVQLREKDSTSREFLELAIHLKFILSPFQVPLLINDRVDLCLASG ADGVHLGQTDLPWLEARRILGKDAIIGLSIETKEDFATLTKEDPNPQLEYLAVSPVFDTPTKTNTKEALGLAGVRWLKEK TDIPVVAIGGINISNAKDVIGAGADMIAVVSAICSAKNPKEATVALRNQF
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=176, Percent_Identity=34.6590909090909, Blast_Score=74, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6325042, Length=216, Percent_Identity=35.6481481481481, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_LEPBA (B0SE83)
Other databases:
- EMBL: CP000777 - RefSeq: YP_001963692.1 - ProteinModelPortal: B0SE83 - GeneID: 6387379 - GenomeReviews: CP000777_GR - KEGG: lbf:LBF_2631 - HOGENOM: HBG754477 - OMA: CERYKTR - ProtClustDB: CLSK2336950 - BioCyc: LBIF355278:LBF_2631-MONOMER - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 22795; Mature: 22795
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNKIQGVYLVTDRPLCLHHKLEEVVQMAASGGVSLVQLREKDSTSREFLELAIHLKFIL CCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHH SPFQVPLLINDRVDLCLASGADGVHLGQTDLPWLEARRILGKDAIIGLSIETKEDFATLT CCCCEEEEECCCEEEEEECCCCCEEECCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHC KEDPNPQLEYLAVSPVFDTPTKTNTKEALGLAGVRWLKEKTDIPVVAIGGINISNAKDVI CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHH GAGADMIAVVSAICSAKNPKEATVALRNQF CCCHHHHHHHHHHHCCCCCCHHEEEEECCC >Mature Secondary Structure MQNKIQGVYLVTDRPLCLHHKLEEVVQMAASGGVSLVQLREKDSTSREFLELAIHLKFIL CCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHH SPFQVPLLINDRVDLCLASGADGVHLGQTDLPWLEARRILGKDAIIGLSIETKEDFATLT CCCCEEEEECCCEEEEEECCCCCEEECCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHC KEDPNPQLEYLAVSPVFDTPTKTNTKEALGLAGVRWLKEKTDIPVVAIGGINISNAKDVI CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHH GAGADMIAVVSAICSAKNPKEATVALRNQF CCCHHHHHHHHHHHCCCCCCHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA