| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is pspE [C]
Identifier: 183221988
GI number: 183221988
Start: 2722154
End: 2722603
Strand: Reverse
Name: pspE [C]
Synonym: LEPBI_I2629
Alternate gene names: 183221988
Gene position: 2722603-2722154 (Counterclockwise)
Preceding gene: 183221993
Following gene: 183221981
Centisome position: 75.63
GC content: 39.56
Gene sequence:
>450_bases ATGGTAAGGGAATGGTCTGTATACCATACCCCCTATGGTATACACTTTTTCTTGACTCCAATCCTTGCAAGGAAAAAATG GAAAAAAGAGATAAATATGAAAACATTTGTAATTGTGGGAGTGATCATTGGATTCCTCTTTGTTTTCGTGAAAAAGATTC AATCCAAAGGAGATAAACAAATGGTGCAAGAATGGATCCAAAGTGGAGCGGTAGTTGTGGACGTTCGAACAAAATCAGAA TTTGCGGAAGGCCATTTCCCAGGTTCGATCAATATTCCGGTCGATGTGTTACCAAATGAGCTTGGTGCAATTAAAAACAA ACAATCCAAAATTGTGGTTTATTGCCGTTCCGGAGCACGGAGTGAAAGGGCAAAACAAATTTTGACTGCGAGTGGTTACT CTTCTGTCATCAATGCTGGTGGTTTAGGAGATATGCCTAATTCTCGTTAA
Upstream 100 bases:
>100_bases ATATAGAGGTTTTATCTGAATTCCATTCATCGAATCTGTATCTACCATGGTATCATTCTCCTAAATTTTTTTCACCATTC AACATTATTTTTCCTTTCGA
Downstream 100 bases:
>100_bases GCGAACTTATCTTTTTTAGTTTAAACTACTGCACCCATTGGGCTCTTTGCTTTAAATTGGTGTAGTAGATATAAATCAGC TAGTTTGGTTTGGGATTCGT
Product: rhodanese-like domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Phage Shock Protein E; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Protein; Phage Shock Operon Rhodanese PspE; Metallo-Beta-Lactamase Superfamily Protein
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MVREWSVYHTPYGIHFFLTPILARKKWKKEINMKTFVIVGVIIGFLFVFVKKIQSKGDKQMVQEWIQSGAVVVDVRTKSE FAEGHFPGSINIPVDVLPNELGAIKNKQSKIVVYCRSGARSERAKQILTASGYSSVINAGGLGDMPNSR
Sequences:
>Translated_149_residues MVREWSVYHTPYGIHFFLTPILARKKWKKEINMKTFVIVGVIIGFLFVFVKKIQSKGDKQMVQEWIQSGAVVVDVRTKSE FAEGHFPGSINIPVDVLPNELGAIKNKQSKIVVYCRSGARSERAKQILTASGYSSVINAGGLGDMPNSR >Mature_149_residues MVREWSVYHTPYGIHFFLTPILARKKWKKEINMKTFVIVGVIIGFLFVFVKKIQSKGDKQMVQEWIQSGAVVVDVRTKSE FAEGHFPGSINIPVDVLPNELGAIKNKQSKIVVYCRSGARSERAKQILTASGYSSVINAGGLGDMPNSR
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787567, Length=74, Percent_Identity=39.1891891891892, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16657; Mature: 16657
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVREWSVYHTPYGIHFFLTPILARKKWKKEINMKTFVIVGVIIGFLFVFVKKIQSKGDKQ CCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH MVQEWIQSGAVVVDVRTKSEFAEGHFPGSINIPVDVLPNELGAIKNKQSKIVVYCRSGAR HHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCCCEECCCHHHHHCCCCCEEEEEECCCCC SERAKQILTASGYSSVINAGGLGDMPNSR HHHHHHHHHCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVREWSVYHTPYGIHFFLTPILARKKWKKEINMKTFVIVGVIIGFLFVFVKKIQSKGDKQ CCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH MVQEWIQSGAVVVDVRTKSEFAEGHFPGSINIPVDVLPNELGAIKNKQSKIVVYCRSGAR HHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCCCEECCCHHHHHCCCCCEEEEEECCCCC SERAKQILTASGYSSVINAGGLGDMPNSR HHHHHHHHHCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA