| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221993
Identifier: 183221993
GI number: 183221993
Start: 2725034
End: 2726554
Strand: Reverse
Name: 183221993
Synonym: LEPBI_I2634
Alternate gene names: NA
Gene position: 2726554-2725034 (Counterclockwise)
Preceding gene: 183221994
Following gene: 183221988
Centisome position: 75.74
GC content: 35.11
Gene sequence:
>1521_bases ATGGCTAGTCCAAAAGCTATTGCATTAGAATTCAAACGAGAATTAGGCCTTCATACTAATATTGAAAATATCAATCATCC GATTGTGGAGAATTCACCATTCCACTTTAAATTTTTCCAAATCACAGATGAAGTAGAAAATACATTATTCCAAATTTTAG ATCGATTTCTGTTGCAATTGGATCTAATCATTGTTAGAGATTCAGTTCTTGCGGCAATGAAAGAAACTGTCACCAATGCA ATCAAAGCGAATGCAAAACGTGTATTCTTTAAAAATAATGCAAGCGATATCACGAATGATAAAGAATACGAATCGATCAT AAACGAGTTTAAGTCTACTTACATTGAAAATCGTGATGAAATTGAAGAATCACTTCAGAAAAATAATTTCGGAGTGTTTG TTTCGTTTATCCATAACAGAAGTTTGATGCGGATCCGAATTATGAACAATGTGCAATTAACACCCATCGAAGCACAAAGA ATCAAGGAACGAATCTCAAAAGCAAAAAATTATAACGATTTGGCAGATGCCTTTATGGATATGTCAAATGACCAAGAAGG TGCAGGTCTTGGTCTCATCATGACACTTATGATGCTGAAAAACGACGGCCTCGGTGAATCTGCATTTAAGTTTGAATCTA GCGAAAACAAAACTGTGTTTATGATTGATATTCCTGCAAAGGTTTCAAAGGAAAATCAACAGATCGAAAAAATTGATCAT ATCATTTCTCAAATTGATCATCTTCCTACATTTCCAAAATCAATCAAAGATATCCAAGATGCAATTGATAAACCCAATTC CAGCATTGGTACAATCGCAGAAATGATCAAACGTGATATCGCCTTATCTGCCAATATCTTAAAACTTTCAAACTCTGCTG CGTTTCGTCGGGGAGGAAAAGTAGAAAGTTTGGACCGTGCCATCCAGTTAATTGGATTAAAAGAATTACAAACACTGTTA TATAGTCTAGCGACCAAACAAATGCTAGAGGATAAATTTCCTGCTTTTGCTGCGATTTGGGAAAAGTCAAACGAGTCTGC GTTTTATTGCAAATCAATTGGCCAAAAAATGGGTTTGAATAAATCAGACCTAAGCAATTTGATTGCAGCATCTCTCCTTC ATGACATCGGTGAGATTTTGTTATTGTCTTTTGATAAACATCATATGAACAAAATCAAAACTTTTACTTCCACAAGAGAA ATTGCATCGACGATTAGTATGGAAGAATCCGCAATCGGGATCACCCATTCGAAATTAGGTGCGATGGTTGGGGAGAAGTG GGGATTCCCAATCCTGTATACAAAAGCAATGGAATACCACCATAGACCATTACTTGCTGATGAAGTATATTCGGATATCA TCTATCCTATTTATCTCAGTGATATGATGATTGCGATCAATTCAAAAGAAGCAAAATCTTCTGAAATCCCGATGGAAATT TTGAAAGTTTGTAAATTTCAATCTAAGGCTGAATTCGATTCTTTTAGAACAAAAATTAAGGAACAGTTTTCCGCGTTTTA A
Upstream 100 bases:
>100_bases AACGCTTGCATTTCTAAAATCCTTGCGTTCGATGGTGAGTGAGTGTACTCTTTTCCAAAAGGATTAGGGGATTCCCCCCA CTCCTTTTCCATGAGGTTTT
Downstream 100 bases:
>100_bases ATTCATTGTAACGATTTTGAAACTCTTTGAATCTCGGAATAGAAACTGCTAAGACGTAGGATTGAGACGGATTGTTTTTG ATAAAATCCTGGTGGTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MASPKAIALEFKRELGLHTNIENINHPIVENSPFHFKFFQITDEVENTLFQILDRFLLQLDLIIVRDSVLAAMKETVTNA IKANAKRVFFKNNASDITNDKEYESIINEFKSTYIENRDEIEESLQKNNFGVFVSFIHNRSLMRIRIMNNVQLTPIEAQR IKERISKAKNYNDLADAFMDMSNDQEGAGLGLIMTLMMLKNDGLGESAFKFESSENKTVFMIDIPAKVSKENQQIEKIDH IISQIDHLPTFPKSIKDIQDAIDKPNSSIGTIAEMIKRDIALSANILKLSNSAAFRRGGKVESLDRAIQLIGLKELQTLL YSLATKQMLEDKFPAFAAIWEKSNESAFYCKSIGQKMGLNKSDLSNLIAASLLHDIGEILLLSFDKHHMNKIKTFTSTRE IASTISMEESAIGITHSKLGAMVGEKWGFPILYTKAMEYHHRPLLADEVYSDIIYPIYLSDMMIAINSKEAKSSEIPMEI LKVCKFQSKAEFDSFRTKIKEQFSAF
Sequences:
>Translated_506_residues MASPKAIALEFKRELGLHTNIENINHPIVENSPFHFKFFQITDEVENTLFQILDRFLLQLDLIIVRDSVLAAMKETVTNA IKANAKRVFFKNNASDITNDKEYESIINEFKSTYIENRDEIEESLQKNNFGVFVSFIHNRSLMRIRIMNNVQLTPIEAQR IKERISKAKNYNDLADAFMDMSNDQEGAGLGLIMTLMMLKNDGLGESAFKFESSENKTVFMIDIPAKVSKENQQIEKIDH IISQIDHLPTFPKSIKDIQDAIDKPNSSIGTIAEMIKRDIALSANILKLSNSAAFRRGGKVESLDRAIQLIGLKELQTLL YSLATKQMLEDKFPAFAAIWEKSNESAFYCKSIGQKMGLNKSDLSNLIAASLLHDIGEILLLSFDKHHMNKIKTFTSTRE IASTISMEESAIGITHSKLGAMVGEKWGFPILYTKAMEYHHRPLLADEVYSDIIYPIYLSDMMIAINSKEAKSSEIPMEI LKVCKFQSKAEFDSFRTKIKEQFSAF >Mature_505_residues ASPKAIALEFKRELGLHTNIENINHPIVENSPFHFKFFQITDEVENTLFQILDRFLLQLDLIIVRDSVLAAMKETVTNAI KANAKRVFFKNNASDITNDKEYESIINEFKSTYIENRDEIEESLQKNNFGVFVSFIHNRSLMRIRIMNNVQLTPIEAQRI KERISKAKNYNDLADAFMDMSNDQEGAGLGLIMTLMMLKNDGLGESAFKFESSENKTVFMIDIPAKVSKENQQIEKIDHI ISQIDHLPTFPKSIKDIQDAIDKPNSSIGTIAEMIKRDIALSANILKLSNSAAFRRGGKVESLDRAIQLIGLKELQTLLY SLATKQMLEDKFPAFAAIWEKSNESAFYCKSIGQKMGLNKSDLSNLIAASLLHDIGEILLLSFDKHHMNKIKTFTSTREI ASTISMEESAIGITHSKLGAMVGEKWGFPILYTKAMEYHHRPLLADEVYSDIIYPIYLSDMMIAINSKEAKSSEIPMEIL KVCKFQSKAEFDSFRTKIKEQFSAF
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 57485; Mature: 57354
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPKAIALEFKRELGLHTNIENINHPIVENSPFHFKFFQITDEVENTLFQILDRFLLQL CCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH DLIIVRDSVLAAMKETVTNAIKANAKRVFFKNNASDITNDKEYESIINEFKSTYIENRDE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHH IEESLQKNNFGVFVSFIHNRSLMRIRIMNNVQLTPIEAQRIKERISKAKNYNDLADAFMD HHHHHHHCCCCEEEEEECCCCEEEEEEECCCEECCCHHHHHHHHHHHHCCCHHHHHHHHH MSNDQEGAGLGLIMTLMMLKNDGLGESAFKFESSENKTVFMIDIPAKVSKENQQIEKIDH CCCCCCCCCHHHHHHHHHHHCCCCCCHHHEECCCCCCEEEEEECCCHHCCHHHHHHHHHH IISQIDHLPTFPKSIKDIQDAIDKPNSSIGTIAEMIKRDIALSANILKLSNSAAFRRGGK HHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHEECCCHHHHCCCC VESLDRAIQLIGLKELQTLLYSLATKQMLEDKFPAFAAIWEKSNESAFYCKSIGQKMGLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHCCC KSDLSNLIAASLLHDIGEILLLSFDKHHMNKIKTFTSTREIASTISMEESAIGITHSKLG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AMVGEKWGFPILYTKAMEYHHRPLLADEVYSDIIYPIYLSDMMIAINSKEAKSSEIPMEI HHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHH LKVCKFQSKAEFDSFRTKIKEQFSAF HHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASPKAIALEFKRELGLHTNIENINHPIVENSPFHFKFFQITDEVENTLFQILDRFLLQL CCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH DLIIVRDSVLAAMKETVTNAIKANAKRVFFKNNASDITNDKEYESIINEFKSTYIENRDE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHH IEESLQKNNFGVFVSFIHNRSLMRIRIMNNVQLTPIEAQRIKERISKAKNYNDLADAFMD HHHHHHHCCCCEEEEEECCCCEEEEEEECCCEECCCHHHHHHHHHHHHCCCHHHHHHHHH MSNDQEGAGLGLIMTLMMLKNDGLGESAFKFESSENKTVFMIDIPAKVSKENQQIEKIDH CCCCCCCCCHHHHHHHHHHHCCCCCCHHHEECCCCCCEEEEEECCCHHCCHHHHHHHHHH IISQIDHLPTFPKSIKDIQDAIDKPNSSIGTIAEMIKRDIALSANILKLSNSAAFRRGGK HHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHEECCCHHHHCCCC VESLDRAIQLIGLKELQTLLYSLATKQMLEDKFPAFAAIWEKSNESAFYCKSIGQKMGLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHCCC KSDLSNLIAASLLHDIGEILLLSFDKHHMNKIKTFTSTREIASTISMEESAIGITHSKLG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AMVGEKWGFPILYTKAMEYHHRPLLADEVYSDIIYPIYLSDMMIAINSKEAKSSEIPMEI HHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHH LKVCKFQSKAEFDSFRTKIKEQFSAF HHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]