Click here to switch to the map view.

The map label for this gene is 183221979

Identifier: 183221979

GI number: 183221979

Start: 2710980

End: 2712758

Strand: Direct

Name: 183221979

Synonym: LEPBI_I2620

Alternate gene names: NA

Gene position: 2710980-2712758 (Clockwise)

Preceding gene: 183221978

Following gene: 183221980

Centisome position: 75.31

GC content: 36.2

Gene sequence:

>1779_bases
ATGACGTTACACAAATATAACACAGGGATTATAGGAAACGGAAGTTACATCGCACATATCAACACTCATGCAGAAGTTGT
TTGGATGTGTTGGCCATATTTTGATAGTTCTCCTATTTTTGGGAACCTTTTAGATAAAACATGTGGTAATTTTAGTATTC
AATCAAGTTCAAAAATCATTTCTACCAATCAGGTTTACTTAGAAAATACAAATATCCTAAAGACAGAAATCCATACAGAA
ACAGGATCATTTGCCGTCTTCGATTTTGCACCGCGATACTACCAAAACGGAATCTTACATTGTCATCGCAATTTTTATAG
AAAGGTAGTTCCTATATCTGGTGATATCAAAATTCAAATTAAAATTGAGCCATCGTATGGCTATGGGAAACAAAAATTGA
ATCCCTACCTTGTCGCAGATCGCATTGAATACAAATCGGATGAATTCCAATTCCAAATACGATCCAATGTATCCCCGAAC
CAAATCCTAAAAGAAAAAGAATTCCATCTAAACCAAACCATCTATCTTGCTCTCATCGAATCCGAATCAATAGAGACTCC
GCTCCATCAATTCATCGAAGAAGAACTCTCAAAAACAAAACAATACTGGCAAAACTGGGTTAAACATTGTACGATTCCTA
ATTTTGCGCAAAAACAACAGATACGCTCCGCATTATGTTTAAAACTACACCAATTCCAAGAAACGGGTGCCATTATTGCT
GCCTCCACGACAAGTCTACCAGAATCACCAAATTCCGGTAGGAACTGGGATTACCGTTATTGTTGGTTACGCGATGGATT
TTACACTCTTTTGGCCTTAACCAATCTTGGACAATTCGAAGAACTAGAACATTACTCACAATACATAAGCAACCTAACAC
CAGCAGATGACGGAAGATTCCAACCACTGTATAGCATATTTGGAGAAAACCTGATTGAAGAATCGGTTTTGGATTTGGAT
GGATACTTAAAAAATCAACCAGTTCGAATTGGAAATTCAGCTTATACTCATAAACAAAACGATGCCTATGGTCAAATTTT
GTTGTCACTCTTACCTTTGTATCTGGATGAAAGAATCCCTGAAAAAAATAGATTCCATAATTTAAATCTAATTCAAAAGA
TTTTAGACCAAATTCAAATCACCATGAACGAACCAGATGCAGGGTTATGGGAGTTTCGAAATTTTTCACAAAAACATTGT
TATACGTATCTATTCCATTGGGTAGGTGCAAAAGCAGCAAAAGAGATTGCTATCAAACTTGAAAAAACTGACCTGATCAA
AAAAGCAGAACATCTAATGGCAGAAGCCTCCTCCAATATTGAAAGTTGTTATGACTTTGAACTCGGTTGTTATACACAAG
CACAAGGGAAAAAAGATTTGGATGCAAGTTTGTTACAGCTGATCACGCTGGGATATTTAGATCCAAAATCAGACAAAGCG
AAATCTCATTTGCTTGCAATTGAAAAACAATTGAAAACAAAAGAAGGATTTATCTATCGTTACCTGCATAAAGACGACTT
TGGAAAACCAGAAACTACATTTTTAGTTTGTACGTTTTGGTACATTGAAGCTCTTGCTTTTATGGATCGATTAGAAGAAG
CAATCCATCTATTTGAATTTGTTTGCGAACATGCAAATCATGTAGGATTATTCAGTGAAGACATTGAATCGATTTCAGGT
AGCCAATGGGGTAATTTCCCACAAACCTATAGCCACGTCGGTCTTGTGAACGCATCTCATAAAATTGCCTCCAAAATGAA
CAGAAGTCTCTTCTGGTAA

Upstream 100 bases:

>100_bases
ATTGGGAAATCAGAAACCATCGCAAAATTCCGATTCCAATCAACAGATGATGTTCATCTATGGATACAAAATTTAATCAA
ACACTTAACAAAGGTTCATC

Downstream 100 bases:

>100_bases
ATTCCATTCGATTCCCTGGTCCGCGTAATTTGTGTTGGTTCAGTTTCGCTTTCAGAAGTGCAGGTTTTGGTTACAAATTT
TGTCTTGAAGGAATTCCTTT

Product: putative glycosyl hydrolase

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycoside Hydrolase Family; Glucoamylase; Glycosy Hydrolase Family Protein; Trehalose-Phosphatase; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Family Protein; Glucoamylase-Related Protein Trehalase

Number of amino acids: Translated: 592; Mature: 591

Protein sequence:

>592_residues
MTLHKYNTGIIGNGSYIAHINTHAEVVWMCWPYFDSSPIFGNLLDKTCGNFSIQSSSKIISTNQVYLENTNILKTEIHTE
TGSFAVFDFAPRYYQNGILHCHRNFYRKVVPISGDIKIQIKIEPSYGYGKQKLNPYLVADRIEYKSDEFQFQIRSNVSPN
QILKEKEFHLNQTIYLALIESESIETPLHQFIEEELSKTKQYWQNWVKHCTIPNFAQKQQIRSALCLKLHQFQETGAIIA
ASTTSLPESPNSGRNWDYRYCWLRDGFYTLLALTNLGQFEELEHYSQYISNLTPADDGRFQPLYSIFGENLIEESVLDLD
GYLKNQPVRIGNSAYTHKQNDAYGQILLSLLPLYLDERIPEKNRFHNLNLIQKILDQIQITMNEPDAGLWEFRNFSQKHC
YTYLFHWVGAKAAKEIAIKLEKTDLIKKAEHLMAEASSNIESCYDFELGCYTQAQGKKDLDASLLQLITLGYLDPKSDKA
KSHLLAIEKQLKTKEGFIYRYLHKDDFGKPETTFLVCTFWYIEALAFMDRLEEAIHLFEFVCEHANHVGLFSEDIESISG
SQWGNFPQTYSHVGLVNASHKIASKMNRSLFW

Sequences:

>Translated_592_residues
MTLHKYNTGIIGNGSYIAHINTHAEVVWMCWPYFDSSPIFGNLLDKTCGNFSIQSSSKIISTNQVYLENTNILKTEIHTE
TGSFAVFDFAPRYYQNGILHCHRNFYRKVVPISGDIKIQIKIEPSYGYGKQKLNPYLVADRIEYKSDEFQFQIRSNVSPN
QILKEKEFHLNQTIYLALIESESIETPLHQFIEEELSKTKQYWQNWVKHCTIPNFAQKQQIRSALCLKLHQFQETGAIIA
ASTTSLPESPNSGRNWDYRYCWLRDGFYTLLALTNLGQFEELEHYSQYISNLTPADDGRFQPLYSIFGENLIEESVLDLD
GYLKNQPVRIGNSAYTHKQNDAYGQILLSLLPLYLDERIPEKNRFHNLNLIQKILDQIQITMNEPDAGLWEFRNFSQKHC
YTYLFHWVGAKAAKEIAIKLEKTDLIKKAEHLMAEASSNIESCYDFELGCYTQAQGKKDLDASLLQLITLGYLDPKSDKA
KSHLLAIEKQLKTKEGFIYRYLHKDDFGKPETTFLVCTFWYIEALAFMDRLEEAIHLFEFVCEHANHVGLFSEDIESISG
SQWGNFPQTYSHVGLVNASHKIASKMNRSLFW
>Mature_591_residues
TLHKYNTGIIGNGSYIAHINTHAEVVWMCWPYFDSSPIFGNLLDKTCGNFSIQSSSKIISTNQVYLENTNILKTEIHTET
GSFAVFDFAPRYYQNGILHCHRNFYRKVVPISGDIKIQIKIEPSYGYGKQKLNPYLVADRIEYKSDEFQFQIRSNVSPNQ
ILKEKEFHLNQTIYLALIESESIETPLHQFIEEELSKTKQYWQNWVKHCTIPNFAQKQQIRSALCLKLHQFQETGAIIAA
STTSLPESPNSGRNWDYRYCWLRDGFYTLLALTNLGQFEELEHYSQYISNLTPADDGRFQPLYSIFGENLIEESVLDLDG
YLKNQPVRIGNSAYTHKQNDAYGQILLSLLPLYLDERIPEKNRFHNLNLIQKILDQIQITMNEPDAGLWEFRNFSQKHCY
TYLFHWVGAKAAKEIAIKLEKTDLIKKAEHLMAEASSNIESCYDFELGCYTQAQGKKDLDASLLQLITLGYLDPKSDKAK
SHLLAIEKQLKTKEGFIYRYLHKDDFGKPETTFLVCTFWYIEALAFMDRLEEAIHLFEFVCEHANHVGLFSEDIESISGS
QWGNFPQTYSHVGLVNASHKIASKMNRSLFW

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68531; Mature: 68400

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLHKYNTGIIGNGSYIAHINTHAEVVWMCWPYFDSSPIFGNLLDKTCGNFSIQSSSKII
CCEEEECCCEEECCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHCCCCCEECCCCEEE
STNQVYLENTNILKTEIHTETGSFAVFDFAPRYYQNGILHCHRNFYRKVVPISGDIKIQI
ECCEEEEECCCEEEEEEECCCCCEEEEECCHHHHHCCHHHHHHHHHHEEECCCCCEEEEE
KIEPSYGYGKQKLNPYLVADRIEYKSDEFQFQIRSNVSPNQILKEKEFHLNQTIYLALIE
EEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEC
SESIETPLHQFIEEELSKTKQYWQNWVKHCTIPNFAQKQQIRSALCLKLHQFQETGAIIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
ASTTSLPESPNSGRNWDYRYCWLRDGFYTLLALTNLGQFEELEHYSQYISNLTPADDGRF
EECCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
QPLYSIFGENLIEESVLDLDGYLKNQPVRIGNSAYTHKQNDAYGQILLSLLPLYLDERIP
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
EKNRFHNLNLIQKILDQIQITMNEPDAGLWEFRNFSQKHCYTYLFHWVGAKAAKEIAIKL
CCCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEE
EKTDLIKKAEHLMAEASSNIESCYDFELGCYTQAQGKKDLDASLLQLITLGYLDPKSDKA
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCHH
KSHLLAIEKQLKTKEGFIYRYLHKDDFGKPETTFLVCTFWYIEALAFMDRLEEAIHLFEF
HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
VCEHANHVGLFSEDIESISGSQWGNFPQTYSHVGLVNASHKIASKMNRSLFW
HHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHEEECCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLHKYNTGIIGNGSYIAHINTHAEVVWMCWPYFDSSPIFGNLLDKTCGNFSIQSSSKII
CEEEECCCEEECCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHCCCCCEECCCCEEE
STNQVYLENTNILKTEIHTETGSFAVFDFAPRYYQNGILHCHRNFYRKVVPISGDIKIQI
ECCEEEEECCCEEEEEEECCCCCEEEEECCHHHHHCCHHHHHHHHHHEEECCCCCEEEEE
KIEPSYGYGKQKLNPYLVADRIEYKSDEFQFQIRSNVSPNQILKEKEFHLNQTIYLALIE
EEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEC
SESIETPLHQFIEEELSKTKQYWQNWVKHCTIPNFAQKQQIRSALCLKLHQFQETGAIIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
ASTTSLPESPNSGRNWDYRYCWLRDGFYTLLALTNLGQFEELEHYSQYISNLTPADDGRF
EECCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
QPLYSIFGENLIEESVLDLDGYLKNQPVRIGNSAYTHKQNDAYGQILLSLLPLYLDERIP
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
EKNRFHNLNLIQKILDQIQITMNEPDAGLWEFRNFSQKHCYTYLFHWVGAKAAKEIAIKL
CCCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEE
EKTDLIKKAEHLMAEASSNIESCYDFELGCYTQAQGKKDLDASLLQLITLGYLDPKSDKA
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCHH
KSHLLAIEKQLKTKEGFIYRYLHKDDFGKPETTFLVCTFWYIEALAFMDRLEEAIHLFEF
HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
VCEHANHVGLFSEDIESISGSQWGNFPQTYSHVGLVNASHKIASKMNRSLFW
HHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHEEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA