| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is cdsA [H]
Identifier: 183221971
GI number: 183221971
Start: 2703568
End: 2704479
Strand: Reverse
Name: cdsA [H]
Synonym: LEPBI_I2612
Alternate gene names: 183221971
Gene position: 2704479-2703568 (Counterclockwise)
Preceding gene: 183221972
Following gene: 183221970
Centisome position: 75.13
GC content: 39.91
Gene sequence:
>912_bases ATGAGTGAAACGACACTCCGTATTTTGTCTGCAATTGTACTCACTTTTGTATATGTATTCATGATCTTTCATAGTTCCTG GTACTACTTGGAATTTTATACCTTTGGTGTTGTGATGATTTATCTCGGATTAAAAGAGTTGTATGCCTTCTGCAAAACAG AAGAATCCAAACCATTTTTTGGAACTGGGTTACTCTTTTCCCTTTTGATCTTTACTGTGTATTACATCCAATTTTTGGGA CTACAGTTTGAGGTCACACCTCCTGGATTTGTATTAGAGTTTTCCAAAATATTACGAGAAGGTTTCCATCCGATTCCTTT TTTGTTAGTGGCACTCTCCATTACGGTTTGGATATTACAAATCCTGAAACGACCGTTAGATGGTGCACTTTTCTCAGTCG GTGGAACCATGCTTGGTCCTATTTATATCGCGATTCCGATTGGGCATTTTTTATTGTTACTTGCACTTCCGTTTGGAGCT TATTATATCTTCCTCGTTTCTGTGATCACATTTATGAGTGATGCGGGTGCGTATTTTGGTGGTCGTTGGTTTGGAAAACA CCCAGCCGGCTTAAAAATTTCCCCGAAAAAAACATGGGAAGGATATGTTGTTGGAAACCTAACGGCTGTCATTGGGGCAC AAGTTTTAAATTTTACTTGGGAACATTTCAGCGGTGTGAAGTTACCAGTGGGAATTTTAGAGACCATTATCTTATCCTTT GTGATTTCTGTGATTTCTGTCATGGGAGATTTGGCAGAGTCAGCCATGAAACGGGATGCCAAAATCAAAGACTCAGGAAG TCTTATCCCTGGCCACGGCGGAATTCTCGATTTAGCAGATGCACTCCTTTTCACTGTGCCTGCGATTTATTATTATTTAG TTTTCAAAGGTTTCCTTGGATTCCCCGTCTGA
Upstream 100 bases:
>100_bases TGTATTTTACGAGTACACTTTGGCCTGACTTTGGAAGGACCTCACTCGAGGAAGCTCTTCTTTTTTTTGATTCCCGAAAA CGTAAATTTGGTGGTTTGTT
Downstream 100 bases:
>100_bases TTCATTTGAATCAGACTGTCTAAGTTCTATATGGTAGGTGTTTCGGTATTAGGAATCTCTGGTTCTGTTGGTACTTCCAC AGTGAAGGTACTCCGACAAT
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSETTLRILSAIVLTFVYVFMIFHSSWYYLEFYTFGVVMIYLGLKELYAFCKTEESKPFFGTGLLFSLLIFTVYYIQFLG LQFEVTPPGFVLEFSKILREGFHPIPFLLVALSITVWILQILKRPLDGALFSVGGTMLGPIYIAIPIGHFLLLLALPFGA YYIFLVSVITFMSDAGAYFGGRWFGKHPAGLKISPKKTWEGYVVGNLTAVIGAQVLNFTWEHFSGVKLPVGILETIILSF VISVISVMGDLAESAMKRDAKIKDSGSLIPGHGGILDLADALLFTVPAIYYYLVFKGFLGFPV
Sequences:
>Translated_303_residues MSETTLRILSAIVLTFVYVFMIFHSSWYYLEFYTFGVVMIYLGLKELYAFCKTEESKPFFGTGLLFSLLIFTVYYIQFLG LQFEVTPPGFVLEFSKILREGFHPIPFLLVALSITVWILQILKRPLDGALFSVGGTMLGPIYIAIPIGHFLLLLALPFGA YYIFLVSVITFMSDAGAYFGGRWFGKHPAGLKISPKKTWEGYVVGNLTAVIGAQVLNFTWEHFSGVKLPVGILETIILSF VISVISVMGDLAESAMKRDAKIKDSGSLIPGHGGILDLADALLFTVPAIYYYLVFKGFLGFPV >Mature_302_residues SETTLRILSAIVLTFVYVFMIFHSSWYYLEFYTFGVVMIYLGLKELYAFCKTEESKPFFGTGLLFSLLIFTVYYIQFLGL QFEVTPPGFVLEFSKILREGFHPIPFLLVALSITVWILQILKRPLDGALFSVGGTMLGPIYIAIPIGHFLLLLALPFGAY YIFLVSVITFMSDAGAYFGGRWFGKHPAGLKISPKKTWEGYVVGNLTAVIGAQVLNFTWEHFSGVKLPVGILETIILSFV ISVISVMGDLAESAMKRDAKIKDSGSLIPGHGGILDLADALLFTVPAIYYYLVFKGFLGFPV
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=140, Percent_Identity=43.5714285714286, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1787677, Length=181, Percent_Identity=31.4917127071823, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 33724; Mature: 33592
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETTLRILSAIVLTFVYVFMIFHSSWYYLEFYTFGVVMIYLGLKELYAFCKTEESKPFF CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTGLLFSLLIFTVYYIQFLGLQFEVTPPGFVLEFSKILREGFHPIPFLLVALSITVWILQ HHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ILKRPLDGALFSVGGTMLGPIYIAIPIGHFLLLLALPFGAYYIFLVSVITFMSDAGAYFG HHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC GRWFGKHPAGLKISPKKTWEGYVVGNLTAVIGAQVLNFTWEHFSGVKLPVGILETIILSF CCCCCCCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VISVISVMGDLAESAMKRDAKIKDSGSLIPGHGGILDLADALLFTVPAIYYYLVFKGFLG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC FPV CCC >Mature Secondary Structure SETTLRILSAIVLTFVYVFMIFHSSWYYLEFYTFGVVMIYLGLKELYAFCKTEESKPFF CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTGLLFSLLIFTVYYIQFLGLQFEVTPPGFVLEFSKILREGFHPIPFLLVALSITVWILQ HHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ILKRPLDGALFSVGGTMLGPIYIAIPIGHFLLLLALPFGAYYIFLVSVITFMSDAGAYFG HHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC GRWFGKHPAGLKISPKKTWEGYVVGNLTAVIGAQVLNFTWEHFSGVKLPVGILETIILSF CCCCCCCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VISVISVMGDLAESAMKRDAKIKDSGSLIPGHGGILDLADALLFTVPAIYYYLVFKGFLG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC FPV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]