| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221959
Identifier: 183221959
GI number: 183221959
Start: 2689247
End: 2690149
Strand: Direct
Name: 183221959
Synonym: LEPBI_I2600
Alternate gene names: NA
Gene position: 2689247-2690149 (Clockwise)
Preceding gene: 183221958
Following gene: 183221961
Centisome position: 74.71
GC content: 36.32
Gene sequence:
>903_bases ATGGAATCTCTTCAAAAAGCAGATATTACAATCATTGGTGGAAGTTATTCAGGACTTTCTGCTGCTCTTACCCTTGTTCG ATCTTTACGAAATGTTCTCGTTATCGATTCCGAAAGACCATGTAATCAAAACACACCTTTCTCACATAATTTCATTACGC ACGATGGGATCAAACCGAGTGAAATTAGACAAAAAGCATTATCAGATTTAAATGAATACAAAACCTTCAAACTACAAATA GGTGAAGCTACTTCGATTCAAAAAAAAGGTTCTGGATATTTAATCAAAGGGAATGGATTGAGTGAAATCCAAACTGATAA AATCATTTTTGCGACTGGTGTCAAAGATATATTACCAGAGATACCTGGTTTTGCACAAGCTTGGGGGAAAACTGTCATCC ACTGTCCTTATTGCCACGGATATGAATATGTAGGAAATCAAACTGGATTATGGATGAATGAAGAAGGTGTATACGAACAT GCTAAATTTCTAAAACACTGGTCAAAAGAAATTACCATTTTTACAAATGGCCCAGTGCAATTTTCCACGGAAGAGATAAA CAAAATTGAATCAGAAGGAATTTCGATTCAAACCGAACCAGTCATGGAAATAGTCCAAAAGGATGGGAAAATTTCAGGTT TGTTATTCCAATTAGGGAAAAATATCCCACTCCAAACTTTATATTCAAAAATACCGATTGTTCAACATTCAAAATTGCCG GAAGAACTTGGATGTAAACTTCAGCCAAGTGGTCATATTGATGTGTCTCCATTTTATGAAACAAGTGTTCAAGGTGTTTA TGCGATAGGGGATATGGCTTCGATGTTTCGCACTGTTGCGCATGCAGTCTACTCTGGAAATATTGCAGGTGCTATGCTCA ATCGATCGATGATTTTGTCTTAA
Upstream 100 bases:
>100_bases TGGATGCGAGTGGGAACTTACCAAAAGAATTGTATGAAAATTTAACCTTTTACGAAGTTTAATCCTTGCCAACTTCCATA GATGCAACACAATTGCATTT
Downstream 100 bases:
>100_bases TTAAACTTCTTCTACAAAATAGGGTCTTGTGTATTCGCGTACAATCTCTACCACAAATCGGCCCCAAGATTTTGGGTCTT CTTGTGAAATATTGACTTGT
Product: putative thioredoxin-disulfide reductase
Products: NA
Alternate protein names: Thioredoxin Reductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; Reductase; Thioredoxin-Disulfide Reductase; Pyridine Nucleotide-Disulphide Oxidoreductase Class II; Pyridine Nucleotide-Disulphide Oxidoreductase; FAD Dependent Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase; Thioredoxin Reductase Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Domain Protein; Methyltransferase Type; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Alkyl Hydroperoxide Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; NADPH Dependent Thioredoxin Reductase; Oxidoreductase Protein; Methyltransferase; AhpF Family Protein/Thioredoxin Reductase; Disulfide Oxidoreductase; Alkyl Hydroperoxide Reductase Large Subunit
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MESLQKADITIIGGSYSGLSAALTLVRSLRNVLVIDSERPCNQNTPFSHNFITHDGIKPSEIRQKALSDLNEYKTFKLQI GEATSIQKKGSGYLIKGNGLSEIQTDKIIFATGVKDILPEIPGFAQAWGKTVIHCPYCHGYEYVGNQTGLWMNEEGVYEH AKFLKHWSKEITIFTNGPVQFSTEEINKIESEGISIQTEPVMEIVQKDGKISGLLFQLGKNIPLQTLYSKIPIVQHSKLP EELGCKLQPSGHIDVSPFYETSVQGVYAIGDMASMFRTVAHAVYSGNIAGAMLNRSMILS
Sequences:
>Translated_300_residues MESLQKADITIIGGSYSGLSAALTLVRSLRNVLVIDSERPCNQNTPFSHNFITHDGIKPSEIRQKALSDLNEYKTFKLQI GEATSIQKKGSGYLIKGNGLSEIQTDKIIFATGVKDILPEIPGFAQAWGKTVIHCPYCHGYEYVGNQTGLWMNEEGVYEH AKFLKHWSKEITIFTNGPVQFSTEEINKIESEGISIQTEPVMEIVQKDGKISGLLFQLGKNIPLQTLYSKIPIVQHSKLP EELGCKLQPSGHIDVSPFYETSVQGVYAIGDMASMFRTVAHAVYSGNIAGAMLNRSMILS >Mature_300_residues MESLQKADITIIGGSYSGLSAALTLVRSLRNVLVIDSERPCNQNTPFSHNFITHDGIKPSEIRQKALSDLNEYKTFKLQI GEATSIQKKGSGYLIKGNGLSEIQTDKIIFATGVKDILPEIPGFAQAWGKTVIHCPYCHGYEYVGNQTGLWMNEEGVYEH AKFLKHWSKEITIFTNGPVQFSTEEINKIESEGISIQTEPVMEIVQKDGKISGLLFQLGKNIPLQTLYSKIPIVQHSKLP EELGCKLQPSGHIDVSPFYETSVQGVYAIGDMASMFRTVAHAVYSGNIAGAMLNRSMILS
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33127; Mature: 33127
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLQKADITIIGGSYSGLSAALTLVRSLRNVLVIDSERPCNQNTPFSHNFITHDGIKPS CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEECCCCCHH EIRQKALSDLNEYKTFKLQIGEATSIQKKGSGYLIKGNGLSEIQTDKIIFATGVKDILPE HHHHHHHHHHHHCEEEEEEECCCCCHHCCCCCEEEECCCCCCCCCCCEEEECCHHHHHHC IPGFAQAWGKTVIHCPYCHGYEYVGNQTGLWMNEEGVYEHAKFLKHWSKEITIFTNGPVQ CCCHHHHHCCCEEECCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCEEEEEECCCCE FSTEEINKIESEGISIQTEPVMEIVQKDGKISGLLFQLGKNIPLQTLYSKIPIVQHSKLP ECHHHHHHHHHCCCEEEHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC EELGCKLQPSGHIDVSPFYETSVQGVYAIGDMASMFRTVAHAVYSGNIAGAMLNRSMILS HHHCCEECCCCCEECCCCHHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MESLQKADITIIGGSYSGLSAALTLVRSLRNVLVIDSERPCNQNTPFSHNFITHDGIKPS CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEECCCCCHH EIRQKALSDLNEYKTFKLQIGEATSIQKKGSGYLIKGNGLSEIQTDKIIFATGVKDILPE HHHHHHHHHHHHCEEEEEEECCCCCHHCCCCCEEEECCCCCCCCCCCEEEECCHHHHHHC IPGFAQAWGKTVIHCPYCHGYEYVGNQTGLWMNEEGVYEHAKFLKHWSKEITIFTNGPVQ CCCHHHHHCCCEEECCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCEEEEEECCCCE FSTEEINKIESEGISIQTEPVMEIVQKDGKISGLLFQLGKNIPLQTLYSKIPIVQHSKLP ECHHHHHHHHHCCCEEEHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC EELGCKLQPSGHIDVSPFYETSVQGVYAIGDMASMFRTVAHAVYSGNIAGAMLNRSMILS HHHCCEECCCCCEECCCCHHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA