| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221958
Identifier: 183221958
GI number: 183221958
Start: 2686671
End: 2689208
Strand: Direct
Name: 183221958
Synonym: LEPBI_I2599
Alternate gene names: NA
Gene position: 2686671-2689208 (Clockwise)
Preceding gene: 183221956
Following gene: 183221959
Centisome position: 74.64
GC content: 39.48
Gene sequence:
>2538_bases ATGCCTCTAGATACCAGTAAAAATAACCAAAAGATCCCAGTCAATCCAGGTGAAGTGCTTTTCATTGGAGGTAAGGCCTC TACGTCCATGAACATCCTCCATGAAGGTTCGGTTCGAGTGGAGACCACTCTTGGAGACACAAGCATTGTCCTCTATAGTT TGGAAGGGGCAAACCTAACTCCAGGTATCTTTGCACTGCTCGAAGGAACACCTTACCCCTATACAATCCGTGCCAAAACT TCCTGCGTTGTTTCCACTTACGTGATGAACCAACCCAATGCCAAAAAAACCCTCACAACAAAGGTATCCGTTGGGGTCAT GGCCGTTCGTACCCTACTCAAAGAAATTGGAGAATTGTACAAACGAGTTTTGTCCATCAAAGGACTAGCCTCCAAATTTG AACAAACCATGGATAATTTGGGTGCTGTGTATTATATTTTAAACCCTTCTATCTTTTCTGATGTCACACCTGGTGCCATG ATCACGCGCGATGAAAACATCATTGATCCTGTGATGAAACTCATCCGAAACAATCTCGCTGGTTTCCAAGAACATGGCGG TATGTTACCCGACAAACCTAGTGTCACTTTTTTAGAAGAAGACCACGGCGAATTTTTTGAAAAAGATTATAGTGAAGCAA TTGAATGGAATGATGCTGAATTTCATTTCATTCGAAAAATATTATCTGTGAATCCTAAAATTTCACAAGCATTGTTTGAG GCAGATCCAAGCCTTTTACAAAGTGCTGCCGAAAGTTATGTCAAAACCTATCGCGAATTATTTGAATTACTCAGCAAAGA GACCTTCGAATTATCCGAAACAATGAATTCAATGTTTGTGGGCGAAAACTCATTATTAGAAAAATTCAATTTAACATTAG ATTTATTTAATACGGGTTACTCGACAATTCCATCAACAGTATTACTTCCTATTACCGAATGGGCTTTGAAAAAATCAAAA TCCCTTCTCGAAGAATACAAACAAATTTTTGGAACCAATTATGCATCCATTGGAAACTGTTTAGACAAATTGGAATCCAA ACAAACGGAACTCACGTCCAAGTATGGACACGAACTCAATGCACAAAAAAATAAAGAGGAAGCGATTGCTCAAGGAAATG ATCCTATCCGAGCAGGAATTGATACCAAGGCTTTAAAAGTAGAATTATTAAATTCGGCGAGCCAAATTCTAAACTATTCC CAAGTAGACCCTGAATCGGTAAAAGAGTTTTCCACTTTAATGGTAAAACTCAAATCATTTAAAAACCCTCTCGATCCAGA ACCAGACAACCGTAAAATTCGCCGTACAATTGCCAAAACTTATTGGGATGTATATAAAAAATCCTTCACCAAATGGTTAC AATCAGGGAAACAGGCTCCAAAAGCCGTAGAACTGATGTTACGCTATGGATACTTCGATGAATCCTTACTCGACGACGGA CATATTGTAGAACTTGTAGGGCGTTTGTACCAACCTGGAGGGAATCCAAGTGCACCGATCCACCATGGTACCGATTGGTT AGAAAAAGTGTATTCAAGAGAAGTGCCAACCTCGGTCGATGAGTTGGGCCAAACATTTTTTGAAAAATTAAAAATGGATC TCAAAGACTCTGGGATCAAATCGGAAAAAGACATCCCACCAGATTATGATACAGGAGAGGCAAGGCTCGCTTCCGAAATC TCTTCCATGTATGAACCAAACGTACGTTTGACTTCTGGAAATATTGCAAGTCACTTCCCTATCCTAACAAAATACCATAT CACGATCCCTCTTGAGAAATGTTTTGTTTCGAAAGATGATGTAGAAAAAGCACTCCAATACATCTTGGGAGTTGACTACA CTGCTTTCAATCGTGAGGTAATTTACCGAAACGAAGAGATTGGAATCAAAAACGAATTCATCCAAAGGTCAATCATTCCT GATTTTATCTTAGTCCCTTCTATTGGACCAAAGATCATGATGTGGCAAGACCTTTCTATCTTTCGGGGTGCGGGCTCCAA AGAATCAAGAGGAAGGATTTGTATCCCTCATTTTGTGACAGGGGATCTCAAAACTTTTATGTTGGAAGCAATTGCTGCGT TCCGATGGGAACTTTGTAAAAATATCCTTGGTCCCGATTGGAACAATGTGGGAATACCTTCCATCACTGCAGATTACACA GATTATGTGCAATTTTATAAAAAAAGTAAGGATCTTTCACCTGAACTCAAAGAAAAAATTTCATCCGAGTTCAAACGATT TCGAACTGACCGTGATAAATTTGCGTATGATTACTCTTTATGGATCCGGTATGAAGCTGAAGGTGTCCAACGTGTCAACC GAGTCGTGCGTTCCATCTTCTACCGTCACATCCCATTCCACAAAAATATTCGCGAAAAAGTTTCTTCACAACCAGCGTAT GCAGAACTCCACAACCGATTCAAAAACATTCGAACTCGCCAACACAAAGAATTCGAAAACAAATACAAAAAGTACATGGA TGCGAGTGGGAACTTACCAAAAGAATTGTATGAAAATTTAACCTTTTACGAAGTTTAA
Upstream 100 bases:
>100_bases GTGGCTGTAACATGTTGTATTTTTCTAAAAAGTATTTTGCAATTTGGCGCTTCTTTATTAGCGTTTGTCGGAAACCTAAG TTTCCTTTACGAACAACCAA
Downstream 100 bases:
>100_bases TCCTTGCCAACTTCCATAGATGCAACACAATTGCATTTATGGAATCTCTTCAAAAAGCAGATATTACAATCATTGGTGGA AGTTATTCAGGACTTTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 845; Mature: 844
Protein sequence:
>845_residues MPLDTSKNNQKIPVNPGEVLFIGGKASTSMNILHEGSVRVETTLGDTSIVLYSLEGANLTPGIFALLEGTPYPYTIRAKT SCVVSTYVMNQPNAKKTLTTKVSVGVMAVRTLLKEIGELYKRVLSIKGLASKFEQTMDNLGAVYYILNPSIFSDVTPGAM ITRDENIIDPVMKLIRNNLAGFQEHGGMLPDKPSVTFLEEDHGEFFEKDYSEAIEWNDAEFHFIRKILSVNPKISQALFE ADPSLLQSAAESYVKTYRELFELLSKETFELSETMNSMFVGENSLLEKFNLTLDLFNTGYSTIPSTVLLPITEWALKKSK SLLEEYKQIFGTNYASIGNCLDKLESKQTELTSKYGHELNAQKNKEEAIAQGNDPIRAGIDTKALKVELLNSASQILNYS QVDPESVKEFSTLMVKLKSFKNPLDPEPDNRKIRRTIAKTYWDVYKKSFTKWLQSGKQAPKAVELMLRYGYFDESLLDDG HIVELVGRLYQPGGNPSAPIHHGTDWLEKVYSREVPTSVDELGQTFFEKLKMDLKDSGIKSEKDIPPDYDTGEARLASEI SSMYEPNVRLTSGNIASHFPILTKYHITIPLEKCFVSKDDVEKALQYILGVDYTAFNREVIYRNEEIGIKNEFIQRSIIP DFILVPSIGPKIMMWQDLSIFRGAGSKESRGRICIPHFVTGDLKTFMLEAIAAFRWELCKNILGPDWNNVGIPSITADYT DYVQFYKKSKDLSPELKEKISSEFKRFRTDRDKFAYDYSLWIRYEAEGVQRVNRVVRSIFYRHIPFHKNIREKVSSQPAY AELHNRFKNIRTRQHKEFENKYKKYMDASGNLPKELYENLTFYEV
Sequences:
>Translated_845_residues MPLDTSKNNQKIPVNPGEVLFIGGKASTSMNILHEGSVRVETTLGDTSIVLYSLEGANLTPGIFALLEGTPYPYTIRAKT SCVVSTYVMNQPNAKKTLTTKVSVGVMAVRTLLKEIGELYKRVLSIKGLASKFEQTMDNLGAVYYILNPSIFSDVTPGAM ITRDENIIDPVMKLIRNNLAGFQEHGGMLPDKPSVTFLEEDHGEFFEKDYSEAIEWNDAEFHFIRKILSVNPKISQALFE ADPSLLQSAAESYVKTYRELFELLSKETFELSETMNSMFVGENSLLEKFNLTLDLFNTGYSTIPSTVLLPITEWALKKSK SLLEEYKQIFGTNYASIGNCLDKLESKQTELTSKYGHELNAQKNKEEAIAQGNDPIRAGIDTKALKVELLNSASQILNYS QVDPESVKEFSTLMVKLKSFKNPLDPEPDNRKIRRTIAKTYWDVYKKSFTKWLQSGKQAPKAVELMLRYGYFDESLLDDG HIVELVGRLYQPGGNPSAPIHHGTDWLEKVYSREVPTSVDELGQTFFEKLKMDLKDSGIKSEKDIPPDYDTGEARLASEI SSMYEPNVRLTSGNIASHFPILTKYHITIPLEKCFVSKDDVEKALQYILGVDYTAFNREVIYRNEEIGIKNEFIQRSIIP DFILVPSIGPKIMMWQDLSIFRGAGSKESRGRICIPHFVTGDLKTFMLEAIAAFRWELCKNILGPDWNNVGIPSITADYT DYVQFYKKSKDLSPELKEKISSEFKRFRTDRDKFAYDYSLWIRYEAEGVQRVNRVVRSIFYRHIPFHKNIREKVSSQPAY AELHNRFKNIRTRQHKEFENKYKKYMDASGNLPKELYENLTFYEV >Mature_844_residues PLDTSKNNQKIPVNPGEVLFIGGKASTSMNILHEGSVRVETTLGDTSIVLYSLEGANLTPGIFALLEGTPYPYTIRAKTS CVVSTYVMNQPNAKKTLTTKVSVGVMAVRTLLKEIGELYKRVLSIKGLASKFEQTMDNLGAVYYILNPSIFSDVTPGAMI TRDENIIDPVMKLIRNNLAGFQEHGGMLPDKPSVTFLEEDHGEFFEKDYSEAIEWNDAEFHFIRKILSVNPKISQALFEA DPSLLQSAAESYVKTYRELFELLSKETFELSETMNSMFVGENSLLEKFNLTLDLFNTGYSTIPSTVLLPITEWALKKSKS LLEEYKQIFGTNYASIGNCLDKLESKQTELTSKYGHELNAQKNKEEAIAQGNDPIRAGIDTKALKVELLNSASQILNYSQ VDPESVKEFSTLMVKLKSFKNPLDPEPDNRKIRRTIAKTYWDVYKKSFTKWLQSGKQAPKAVELMLRYGYFDESLLDDGH IVELVGRLYQPGGNPSAPIHHGTDWLEKVYSREVPTSVDELGQTFFEKLKMDLKDSGIKSEKDIPPDYDTGEARLASEIS SMYEPNVRLTSGNIASHFPILTKYHITIPLEKCFVSKDDVEKALQYILGVDYTAFNREVIYRNEEIGIKNEFIQRSIIPD FILVPSIGPKIMMWQDLSIFRGAGSKESRGRICIPHFVTGDLKTFMLEAIAAFRWELCKNILGPDWNNVGIPSITADYTD YVQFYKKSKDLSPELKEKISSEFKRFRTDRDKFAYDYSLWIRYEAEGVQRVNRVVRSIFYRHIPFHKNIREKVSSQPAYA ELHNRFKNIRTRQHKEFENKYKKYMDASGNLPKELYENLTFYEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96456; Mature: 96325
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDTSKNNQKIPVNPGEVLFIGGKASTSMNILHEGSVRVETTLGDTSIVLYSLEGANLT CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEEEECCCCEEEEEEECCCCCC PGIFALLEGTPYPYTIRAKTSCVVSTYVMNQPNAKKTLTTKVSVGVMAVRTLLKEIGELY CHHHHHCCCCCCCEEEECCCHHEEEHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH KRVLSIKGLASKFEQTMDNLGAVYYILNPSIFSDVTPGAMITRDENIIDPVMKLIRNNLA HHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHC GFQEHGGMLPDKPSVTFLEEDHGEFFEKDYSEAIEWNDAEFHFIRKILSVNPKISQALFE CHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH ADPSLLQSAAESYVKTYRELFELLSKETFELSETMNSMFVGENSLLEKFNLTLDLFNTGY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCC STIPSTVLLPITEWALKKSKSLLEEYKQIFGTNYASIGNCLDKLESKQTELTSKYGHELN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC AQKNKEEAIAQGNDPIRAGIDTKALKVELLNSASQILNYSQVDPESVKEFSTLMVKLKSF CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH KNPLDPEPDNRKIRRTIAKTYWDVYKKSFTKWLQSGKQAPKAVELMLRYGYFDESLLDDG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCC HIVELVGRLYQPGGNPSAPIHHGTDWLEKVYSREVPTSVDELGQTFFEKLKMDLKDSGIK HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC SEKDIPPDYDTGEARLASEISSMYEPNVRLTSGNIASHFPILTKYHITIPLEKCFVSKDD CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEEEEHHHHHCCHHH VEKALQYILGVDYTAFNREVIYRNEEIGIKNEFIQRSIIPDFILVPSIGPKIMMWQDLSI HHHHHHHHHCCCCHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEECHHH FRGAGSKESRGRICIPHFVTGDLKTFMLEAIAAFRWELCKNILGPDWNNVGIPSITADYT HHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH DYVQFYKKSKDLSPELKEKISSEFKRFRTDRDKFAYDYSLWIRYEAEGVQRVNRVVRSIF HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEEEEECHHHHHHHHHHHHHHH YRHIPFHKNIREKVSSQPAYAELHNRFKNIRTRQHKEFENKYKKYMDASGNLPKELYENL HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC TFYEV CCCCC >Mature Secondary Structure PLDTSKNNQKIPVNPGEVLFIGGKASTSMNILHEGSVRVETTLGDTSIVLYSLEGANLT CCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEEEECCCCEEEEEEECCCCCC PGIFALLEGTPYPYTIRAKTSCVVSTYVMNQPNAKKTLTTKVSVGVMAVRTLLKEIGELY CHHHHHCCCCCCCEEEECCCHHEEEHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH KRVLSIKGLASKFEQTMDNLGAVYYILNPSIFSDVTPGAMITRDENIIDPVMKLIRNNLA HHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHC GFQEHGGMLPDKPSVTFLEEDHGEFFEKDYSEAIEWNDAEFHFIRKILSVNPKISQALFE CHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH ADPSLLQSAAESYVKTYRELFELLSKETFELSETMNSMFVGENSLLEKFNLTLDLFNTGY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCC STIPSTVLLPITEWALKKSKSLLEEYKQIFGTNYASIGNCLDKLESKQTELTSKYGHELN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC AQKNKEEAIAQGNDPIRAGIDTKALKVELLNSASQILNYSQVDPESVKEFSTLMVKLKSF CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH KNPLDPEPDNRKIRRTIAKTYWDVYKKSFTKWLQSGKQAPKAVELMLRYGYFDESLLDDG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCC HIVELVGRLYQPGGNPSAPIHHGTDWLEKVYSREVPTSVDELGQTFFEKLKMDLKDSGIK HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC SEKDIPPDYDTGEARLASEISSMYEPNVRLTSGNIASHFPILTKYHITIPLEKCFVSKDD CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEEEEHHHHHCCHHH VEKALQYILGVDYTAFNREVIYRNEEIGIKNEFIQRSIIPDFILVPSIGPKIMMWQDLSI HHHHHHHHHCCCCHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEECHHH FRGAGSKESRGRICIPHFVTGDLKTFMLEAIAAFRWELCKNILGPDWNNVGIPSITADYT HHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH DYVQFYKKSKDLSPELKEKISSEFKRFRTDRDKFAYDYSLWIRYEAEGVQRVNRVVRSIF HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEEEEECHHHHHHHHHHHHHHH YRHIPFHKNIREKVSSQPAYAELHNRFKNIRTRQHKEFENKYKKYMDASGNLPKELYENL HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC TFYEV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA