| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221900
Identifier: 183221900
GI number: 183221900
Start: 2627659
End: 2628405
Strand: Direct
Name: 183221900
Synonym: LEPBI_I2539
Alternate gene names: NA
Gene position: 2627659-2628405 (Clockwise)
Preceding gene: 183221898
Following gene: 183221901
Centisome position: 73.0
GC content: 39.63
Gene sequence:
>747_bases ATGAATGAGGACCTAGTAGGAAAATCTAGGAACAGAGGAAAGTGGAAAGCGAATTTTTCAAAATCTCCTAAATTAGCCCG AAAAAGAATTGCTCTCTTTCCAACATTACTTTCCTCTTTAAGGAAATCTATGAAACATTATTTAGCGTTTTTCTCTCTCA TATTAGCCGTAATTTCCGGCAACTGTCGAACAATGGATGCTGCCATCCAATACCCAGAATCTGGAAAATCCAACTTAGGA ATCACGAAAGTAGCAGTACTTGTTTTCGATATAGAAGAGGCCAAATGGGGAGATGAATTCACCGACGCGGTCTCTCTACA AATTGCAAAATCACTACCATTTAAGGTCATCGAAAGGGAACAACTTTCCAAAGTTGTCAATGAACAAAGTTTTTCGAAAA CAGGGATCATTGACACACAAACAGCAGTTAGACTAGGGAAAGTATTGGGAGTGGATGCTTTGGTTTTTGGCCGAGGATCT GCTCTAAAGAAATTCGATGAAAAGGGCAAATTAATCCCCAATTTAGTTGATACGGTTTCTCTCAAGATTGTACACATCGA ATCTGGCCATGTCATTGTCAATGCGAGGAAAAAACCTGGTGCCGATTGGACAATGGCACGCCTCCTTCAATATAGCCTTG GCCTTGGTTTGATTTGGAGTCGCGAAGATATTTTGATTGCGACAAGTCAATATGACTTTGTGGCAGAAAGTTTAGTCGAT CGGATTGTGAGTGAATTAAAAAAATAA
Upstream 100 bases:
>100_bases ACTAAGAAGAGTCGGAGTCAAAATAAATGCAGAAAAATAAATGGAAGCAACTAGCAGGATCAAGGTGATGATAAGAAGGA ATAAACTGAGAGGTTTTTTC
Downstream 100 bases:
>100_bases GTCACTCAAATCATATAGTTTGAAAATTTCATTAGATCAATATAAATTATCAATAAGGAGTCTAGAATGAAAATTAACAT TGGAATTCCAGAAGAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNEDLVGKSRNRGKWKANFSKSPKLARKRIALFPTLLSSLRKSMKHYLAFFSLILAVISGNCRTMDAAIQYPESGKSNLG ITKVAVLVFDIEEAKWGDEFTDAVSLQIAKSLPFKVIEREQLSKVVNEQSFSKTGIIDTQTAVRLGKVLGVDALVFGRGS ALKKFDEKGKLIPNLVDTVSLKIVHIESGHVIVNARKKPGADWTMARLLQYSLGLGLIWSREDILIATSQYDFVAESLVD RIVSELKK
Sequences:
>Translated_248_residues MNEDLVGKSRNRGKWKANFSKSPKLARKRIALFPTLLSSLRKSMKHYLAFFSLILAVISGNCRTMDAAIQYPESGKSNLG ITKVAVLVFDIEEAKWGDEFTDAVSLQIAKSLPFKVIEREQLSKVVNEQSFSKTGIIDTQTAVRLGKVLGVDALVFGRGS ALKKFDEKGKLIPNLVDTVSLKIVHIESGHVIVNARKKPGADWTMARLLQYSLGLGLIWSREDILIATSQYDFVAESLVD RIVSELKK >Mature_248_residues MNEDLVGKSRNRGKWKANFSKSPKLARKRIALFPTLLSSLRKSMKHYLAFFSLILAVISGNCRTMDAAIQYPESGKSNLG ITKVAVLVFDIEEAKWGDEFTDAVSLQIAKSLPFKVIEREQLSKVVNEQSFSKTGIIDTQTAVRLGKVLGVDALVFGRGS ALKKFDEKGKLIPNLVDTVSLKIVHIESGHVIVNARKKPGADWTMARLLQYSLGLGLIWSREDILIATSQYDFVAESLVD RIVSELKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27554; Mature: 27554
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEDLVGKSRNRGKWKANFSKSPKLARKRIALFPTLLSSLRKSMKHYLAFFSLILAVISG CCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NCRTMDAAIQYPESGKSNLGITKVAVLVFDIEEAKWGDEFTDAVSLQIAKSLPFKVIERE CCEEEHHHEECCCCCCCCCCHHEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHH QLSKVVNEQSFSKTGIIDTQTAVRLGKVLGVDALVFGRGSALKKFDEKGKLIPNLVDTVS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHEEECCCHHHHHHHHCCCCCHHHHHHEE LKIVHIESGHVIVNARKKPGADWTMARLLQYSLGLGLIWSREDILIATSQYDFVAESLVD EEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCEEEEECCHHHHHHHHHH RIVSELKK HHHHHHCC >Mature Secondary Structure MNEDLVGKSRNRGKWKANFSKSPKLARKRIALFPTLLSSLRKSMKHYLAFFSLILAVISG CCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NCRTMDAAIQYPESGKSNLGITKVAVLVFDIEEAKWGDEFTDAVSLQIAKSLPFKVIERE CCEEEHHHEECCCCCCCCCCHHEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHH QLSKVVNEQSFSKTGIIDTQTAVRLGKVLGVDALVFGRGSALKKFDEKGKLIPNLVDTVS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHEEECCCHHHHHHHHCCCCCHHHHHHEE LKIVHIESGHVIVNARKKPGADWTMARLLQYSLGLGLIWSREDILIATSQYDFVAESLVD EEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCEEEEECCHHHHHHHHHH RIVSELKK HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA