| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221898
Identifier: 183221898
GI number: 183221898
Start: 2624881
End: 2626608
Strand: Direct
Name: 183221898
Synonym: LEPBI_I2537
Alternate gene names: NA
Gene position: 2624881-2626608 (Clockwise)
Preceding gene: 183221897
Following gene: 183221900
Centisome position: 72.92
GC content: 37.85
Gene sequence:
>1728_bases ATGAACCGTATTGTTTTATTGATTTTACTTTCCATTTTGTCATTCCAATGCCGAATCTTCAAACCATCTAACCTTGACCC TACGGAAGATTTGGGATCCTTACAGTCTTTACTTCGATTTTTGGCTTTAGCGGATGCATATAATACACAAAGCCAAACCG TTTTATTTATGAAATTTGCAGATTCCAACGGAACACCATATGTGAATGGTATCATTGAATATTCTGTTTATAATGAAGCG GATGAGAATGGCATACAAATTTCTCCTTACGGAGAATCTGGCAATGTCCAATCATATACAGCAACATTAGATGCATCAGG TAGAGCCTTTATATTCTTCAGTGAAAGGGGAATTGCCAATATTATACTCAAAGATTCTTCCAATAATTTTGTCGGATCTG TTTCATTTCGAATTTACAATGGTATCACCAAACAATCGTTTTCCATCTTAAGTCGAAATGGGGATGCTCAGTTTATTTTG GAAGATCTTGCAAATTACAGAAATCGATTGGCATCTTATGAATCCTTTGTACCCCTTGGTTCTGCGAATGGAAGGCAGTT TATATACTTACAGGTCCCAAGGACTTATTTCGGTATTAATGATTTTGTATCCGATGGATACATTGCCTCCAGTGCCGATG GAGAAAATTACGACTTAGTGACAAAGATTGATGGCGTCACATTAGAAAGAAAAGTAACCTATGAAACTATATTAGAAATT TCCAAACCGGTATTTAATGGTTATGAGTATGTATTTTTCCTCTCAGAAGAGAAAAGAGACTACCCTACAATAGCAAATTA CCAAAGTAATCGTAATTTAGCATTACGGATTTCTGCTTTTTTTCCACCGGCCGCAAGTTCTGTGACCAGTCTTTCATTAG ACTCTAATCTCTTTTTATTTAGAGATACCAACTTTCCTTGGATGTATCCTGTATTTTACTTTGGGAATGGTCGGTATCTG ATAACTCCCACGCTTTATACTGCAGTGGAAGTCACACCCATCCTCCTCCATTCTGATTTTTCAGTGAACCAAAATATGGT ATCAGGGTTTAGTTGTAGCCTTGCGGATTCTACGAGAAATTCTGTTGGTTTTCAGCTTGTAACCATTGGTGGAACTGAAT ATCTGCAATGTCCCAATTCTAGTTTTCCCATTCCGTCTCAATCCATAGAAGTTCGAAGCATTAATGGGAATGGACTAGAA AATCGAGCCGTCACGTTTGACGCGACACCACAAAGCTTTGATTCATACCCGATTTTTGTAAGAGGTAAATTTGTAGCTAC ATTTGGTGCTACTCCTATTGGTTATACTTTCAATTCTGAAAACTACTTATTATCTTCACCAACTTTAACAAGGAGTAGCA CTCCAATTTCAGGTTTCACATCATTTCTTAACAATGGTAATACGAGCTCCATATTGAGATCTGTGAAAAGTTCCGGGAAC GCCGATTATTTTCTCCTTTCAACAGTTCCATCATTTGTAACTCCCACAATCGAAATCTTTCGTAGCACTGATGGGTTATC CAGTGTGAGTCCAATTCCATCACTTCCAAGTTTGTATAGCACCTCCATTTCCAATCCTGAACAAATCCAATCGGCAAATG GAAAGTTAAACTACAGTTATTCGATTTCGGCAGGTATCGGAATTGGTTCTTTGCCAGTGTATCTGACGTATTTCACTCGT GATGACGGAACTTGGGAAGACCTACCGAAACTCATCAAAATTAGATAA
Upstream 100 bases:
>100_bases ATCCAGTTGGGACAGACCAACGACTGTGACTTCCTATCGACCTCAGATGAATTCCATTTATGCTGAAGTTCGTTATTCAT TTCTATTTTAAGGAGTTTGT
Downstream 100 bases:
>100_bases ATGAAGGTGAATGAAAACAAGGAAATCTCGAACAATGTTTAAATTGATAAAAGATCCGAATCCATTTTATTTACGCAGAT TCGAATGCTTTTTCGATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MNRIVLLILLSILSFQCRIFKPSNLDPTEDLGSLQSLLRFLALADAYNTQSQTVLFMKFADSNGTPYVNGIIEYSVYNEA DENGIQISPYGESGNVQSYTATLDASGRAFIFFSERGIANIILKDSSNNFVGSVSFRIYNGITKQSFSILSRNGDAQFIL EDLANYRNRLASYESFVPLGSANGRQFIYLQVPRTYFGINDFVSDGYIASSADGENYDLVTKIDGVTLERKVTYETILEI SKPVFNGYEYVFFLSEEKRDYPTIANYQSNRNLALRISAFFPPAASSVTSLSLDSNLFLFRDTNFPWMYPVFYFGNGRYL ITPTLYTAVEVTPILLHSDFSVNQNMVSGFSCSLADSTRNSVGFQLVTIGGTEYLQCPNSSFPIPSQSIEVRSINGNGLE NRAVTFDATPQSFDSYPIFVRGKFVATFGATPIGYTFNSENYLLSSPTLTRSSTPISGFTSFLNNGNTSSILRSVKSSGN ADYFLLSTVPSFVTPTIEIFRSTDGLSSVSPIPSLPSLYSTSISNPEQIQSANGKLNYSYSISAGIGIGSLPVYLTYFTR DDGTWEDLPKLIKIR
Sequences:
>Translated_575_residues MNRIVLLILLSILSFQCRIFKPSNLDPTEDLGSLQSLLRFLALADAYNTQSQTVLFMKFADSNGTPYVNGIIEYSVYNEA DENGIQISPYGESGNVQSYTATLDASGRAFIFFSERGIANIILKDSSNNFVGSVSFRIYNGITKQSFSILSRNGDAQFIL EDLANYRNRLASYESFVPLGSANGRQFIYLQVPRTYFGINDFVSDGYIASSADGENYDLVTKIDGVTLERKVTYETILEI SKPVFNGYEYVFFLSEEKRDYPTIANYQSNRNLALRISAFFPPAASSVTSLSLDSNLFLFRDTNFPWMYPVFYFGNGRYL ITPTLYTAVEVTPILLHSDFSVNQNMVSGFSCSLADSTRNSVGFQLVTIGGTEYLQCPNSSFPIPSQSIEVRSINGNGLE NRAVTFDATPQSFDSYPIFVRGKFVATFGATPIGYTFNSENYLLSSPTLTRSSTPISGFTSFLNNGNTSSILRSVKSSGN ADYFLLSTVPSFVTPTIEIFRSTDGLSSVSPIPSLPSLYSTSISNPEQIQSANGKLNYSYSISAGIGIGSLPVYLTYFTR DDGTWEDLPKLIKIR >Mature_575_residues MNRIVLLILLSILSFQCRIFKPSNLDPTEDLGSLQSLLRFLALADAYNTQSQTVLFMKFADSNGTPYVNGIIEYSVYNEA DENGIQISPYGESGNVQSYTATLDASGRAFIFFSERGIANIILKDSSNNFVGSVSFRIYNGITKQSFSILSRNGDAQFIL EDLANYRNRLASYESFVPLGSANGRQFIYLQVPRTYFGINDFVSDGYIASSADGENYDLVTKIDGVTLERKVTYETILEI SKPVFNGYEYVFFLSEEKRDYPTIANYQSNRNLALRISAFFPPAASSVTSLSLDSNLFLFRDTNFPWMYPVFYFGNGRYL ITPTLYTAVEVTPILLHSDFSVNQNMVSGFSCSLADSTRNSVGFQLVTIGGTEYLQCPNSSFPIPSQSIEVRSINGNGLE NRAVTFDATPQSFDSYPIFVRGKFVATFGATPIGYTFNSENYLLSSPTLTRSSTPISGFTSFLNNGNTSSILRSVKSSGN ADYFLLSTVPSFVTPTIEIFRSTDGLSSVSPIPSLPSLYSTSISNPEQIQSANGKLNYSYSISAGIGIGSLPVYLTYFTR DDGTWEDLPKLIKIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63593; Mature: 63593
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIVLLILLSILSFQCRIFKPSNLDPTEDLGSLQSLLRFLALADAYNTQSQTVLFMKFA CCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE DSNGTPYVNGIIEYSVYNEADENGIQISPYGESGNVQSYTATLDASGRAFIFFSERGIAN CCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCEEE IILKDSSNNFVGSVSFRIYNGITKQSFSILSRNGDAQFILEDLANYRNRLASYESFVPLG EEEECCCCCEEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC SANGRQFIYLQVPRTYFGINDFVSDGYIASSADGENYDLVTKIDGVTLERKVTYETILEI CCCCCEEEEEECCCHHCCCHHHHCCCEEEECCCCCCEEEEEEECCEEEEEECHHHHHHHH SKPVFNGYEYVFFLSEEKRDYPTIANYQSNRNLALRISAFFPPAASSVTSLSLDSNLFLF CCHHCCCEEEEEEEECCCCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCEEEE RDTNFPWMYPVFYFGNGRYLITPTLYTAVEVTPILLHSDFSVNQNMVSGFSCSLADSTRN EECCCCEEEEEEEEECCEEEECCCEEEEEEEEEEEEECCCCCCCHHHCCEEEEECCCCCC SVGFQLVTIGGTEYLQCPNSSFPIPSQSIEVRSINGNGLENRAVTFDATPQSFDSYPIFV CCCEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEE RGKFVATFGATPIGYTFNSENYLLSSPTLTRSSTPISGFTSFLNNGNTSSILRSVKSSGN EEEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCC ADYFLLSTVPSFVTPTIEIFRSTDGLSSVSPIPSLPSLYSTSISNPEQIQSANGKLNYSY CCEEEEECCCCHHCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCCEEEEEE SISAGIGIGSLPVYLTYFTRDDGTWEDLPKLIKIR EEECCCCCCCCEEEEEEEECCCCCHHHHHHHEECC >Mature Secondary Structure MNRIVLLILLSILSFQCRIFKPSNLDPTEDLGSLQSLLRFLALADAYNTQSQTVLFMKFA CCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE DSNGTPYVNGIIEYSVYNEADENGIQISPYGESGNVQSYTATLDASGRAFIFFSERGIAN CCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCEEE IILKDSSNNFVGSVSFRIYNGITKQSFSILSRNGDAQFILEDLANYRNRLASYESFVPLG EEEECCCCCEEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC SANGRQFIYLQVPRTYFGINDFVSDGYIASSADGENYDLVTKIDGVTLERKVTYETILEI CCCCCEEEEEECCCHHCCCHHHHCCCEEEECCCCCCEEEEEEECCEEEEEECHHHHHHHH SKPVFNGYEYVFFLSEEKRDYPTIANYQSNRNLALRISAFFPPAASSVTSLSLDSNLFLF CCHHCCCEEEEEEEECCCCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCEEEE RDTNFPWMYPVFYFGNGRYLITPTLYTAVEVTPILLHSDFSVNQNMVSGFSCSLADSTRN EECCCCEEEEEEEEECCEEEECCCEEEEEEEEEEEEECCCCCCCHHHCCEEEEECCCCCC SVGFQLVTIGGTEYLQCPNSSFPIPSQSIEVRSINGNGLENRAVTFDATPQSFDSYPIFV CCCEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEE RGKFVATFGATPIGYTFNSENYLLSSPTLTRSSTPISGFTSFLNNGNTSSILRSVKSSGN EEEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCC ADYFLLSTVPSFVTPTIEIFRSTDGLSSVSPIPSLPSLYSTSISNPEQIQSANGKLNYSY CCEEEEECCCCHHCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCCEEEEEE SISAGIGIGSLPVYLTYFTRDDGTWEDLPKLIKIR EEECCCCCCCCEEEEEEEECCCCCHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA